The Signaling State of Orange Carotenoid Protein
Orange carotenoid protein (OCP) is the photoactive protein that is responsible for high light tolerance in cyanobacteria. We studied the kinetics of the OCP photocycle by monitoring changes in its absorption spectrum, intrinsic fluorescence, and fluorescence of the Nile red dye bound to OCP. It was...
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Veröffentlicht in: | Biophysical journal 2015-08, Vol.109 (3), p.595-607 |
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creator | Maksimov, Eugene G. Shirshin, Evgeny A. Sluchanko, Nikolai N. Zlenko, Dmitry V. Parshina, Evgenia Y. Tsoraev, Georgy V. Klementiev, Konstantin E. Budylin, Gleb S. Schmitt, Franz-Josef Friedrich, Thomas Fadeev, Victor V. Paschenko, Vladimir Z. Rubin, Andrew B. |
description | Orange carotenoid protein (OCP) is the photoactive protein that is responsible for high light tolerance in cyanobacteria. We studied the kinetics of the OCP photocycle by monitoring changes in its absorption spectrum, intrinsic fluorescence, and fluorescence of the Nile red dye bound to OCP. It was demonstrated that all of these three methods provide the same kinetic parameters of the photocycle, namely, the kinetics of OCP relaxation in darkness was biexponential with a ratio of two components equal to 2:1 independently of temperature. Whereas the changes of the absorption spectrum of OCP characterize the geometry and environment of its chromophore, the intrinsic fluorescence of OCP reveals changes in its tertiary structure, and the fluorescence properties of Nile red indicate the exposure of hydrophobic surface areas of OCP to the solvent following the photocycle. The results of molecular-dynamics studies indicated the presence of two metastable conformations of 3′-hydroxyechinenone, which is consistent with characteristic changes in the Raman spectra. We conclude that rotation of the β-ionylidene ring in the C-terminal domain of OCP could be one of the first conformational rearrangements that occur during photoactivation. The obtained results suggest that the photoactivated form of OCP represents a molten globule-like state that is characterized by increased mobility of tertiary structure elements and solvent accessibility. |
doi_str_mv | 10.1016/j.bpj.2015.06.052 |
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We studied the kinetics of the OCP photocycle by monitoring changes in its absorption spectrum, intrinsic fluorescence, and fluorescence of the Nile red dye bound to OCP. It was demonstrated that all of these three methods provide the same kinetic parameters of the photocycle, namely, the kinetics of OCP relaxation in darkness was biexponential with a ratio of two components equal to 2:1 independently of temperature. Whereas the changes of the absorption spectrum of OCP characterize the geometry and environment of its chromophore, the intrinsic fluorescence of OCP reveals changes in its tertiary structure, and the fluorescence properties of Nile red indicate the exposure of hydrophobic surface areas of OCP to the solvent following the photocycle. The results of molecular-dynamics studies indicated the presence of two metastable conformations of 3′-hydroxyechinenone, which is consistent with characteristic changes in the Raman spectra. We conclude that rotation of the β-ionylidene ring in the C-terminal domain of OCP could be one of the first conformational rearrangements that occur during photoactivation. The obtained results suggest that the photoactivated form of OCP represents a molten globule-like state that is characterized by increased mobility of tertiary structure elements and solvent accessibility.</description><identifier>ISSN: 0006-3495</identifier><identifier>EISSN: 1542-0086</identifier><identifier>DOI: 10.1016/j.bpj.2015.06.052</identifier><identifier>PMID: 26244741</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Absorption, Radiation ; Amino Acid Sequence ; Bacterial proteins ; Bacterial Proteins - chemistry ; Bacterial Proteins - metabolism ; Biophysics ; Cyanobacteria ; Cyanobacteria - chemistry ; Fluorescent Dyes - pharmacology ; Kinetics ; Luminescent Proteins - chemistry ; Luminescent Proteins - metabolism ; Molecular Dynamics Simulation ; Molecular Sequence Data ; Protein Binding ; Protein Structure, Tertiary ; Proteins and Nucleic Acids ; Signal Transduction</subject><ispartof>Biophysical journal, 2015-08, Vol.109 (3), p.595-607</ispartof><rights>2015 Biophysical Society</rights><rights>Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.</rights><rights>Copyright Biophysical Society Aug 4, 2015</rights><rights>2015 by the Biophysical Society. 2015 Biophysical Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c479t-66f1bba880fb5110f38b6137231fc524955e320a5dd3ac6e4a72d5f06d6628c33</citedby><cites>FETCH-LOGICAL-c479t-66f1bba880fb5110f38b6137231fc524955e320a5dd3ac6e4a72d5f06d6628c33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572496/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0006349515006621$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,3537,27901,27902,53766,53768,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26244741$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maksimov, Eugene G.</creatorcontrib><creatorcontrib>Shirshin, Evgeny A.</creatorcontrib><creatorcontrib>Sluchanko, Nikolai N.</creatorcontrib><creatorcontrib>Zlenko, Dmitry V.</creatorcontrib><creatorcontrib>Parshina, Evgenia Y.</creatorcontrib><creatorcontrib>Tsoraev, Georgy V.</creatorcontrib><creatorcontrib>Klementiev, Konstantin E.</creatorcontrib><creatorcontrib>Budylin, Gleb S.</creatorcontrib><creatorcontrib>Schmitt, Franz-Josef</creatorcontrib><creatorcontrib>Friedrich, Thomas</creatorcontrib><creatorcontrib>Fadeev, Victor V.</creatorcontrib><creatorcontrib>Paschenko, Vladimir Z.</creatorcontrib><creatorcontrib>Rubin, Andrew B.</creatorcontrib><title>The Signaling State of Orange Carotenoid Protein</title><title>Biophysical journal</title><addtitle>Biophys J</addtitle><description>Orange carotenoid protein (OCP) is the photoactive protein that is responsible for high light tolerance in cyanobacteria. We studied the kinetics of the OCP photocycle by monitoring changes in its absorption spectrum, intrinsic fluorescence, and fluorescence of the Nile red dye bound to OCP. It was demonstrated that all of these three methods provide the same kinetic parameters of the photocycle, namely, the kinetics of OCP relaxation in darkness was biexponential with a ratio of two components equal to 2:1 independently of temperature. Whereas the changes of the absorption spectrum of OCP characterize the geometry and environment of its chromophore, the intrinsic fluorescence of OCP reveals changes in its tertiary structure, and the fluorescence properties of Nile red indicate the exposure of hydrophobic surface areas of OCP to the solvent following the photocycle. The results of molecular-dynamics studies indicated the presence of two metastable conformations of 3′-hydroxyechinenone, which is consistent with characteristic changes in the Raman spectra. We conclude that rotation of the β-ionylidene ring in the C-terminal domain of OCP could be one of the first conformational rearrangements that occur during photoactivation. The obtained results suggest that the photoactivated form of OCP represents a molten globule-like state that is characterized by increased mobility of tertiary structure elements and solvent accessibility.</description><subject>Absorption, Radiation</subject><subject>Amino Acid Sequence</subject><subject>Bacterial proteins</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - metabolism</subject><subject>Biophysics</subject><subject>Cyanobacteria</subject><subject>Cyanobacteria - chemistry</subject><subject>Fluorescent Dyes - pharmacology</subject><subject>Kinetics</subject><subject>Luminescent Proteins - chemistry</subject><subject>Luminescent Proteins - metabolism</subject><subject>Molecular Dynamics Simulation</subject><subject>Molecular Sequence Data</subject><subject>Protein Binding</subject><subject>Protein Structure, Tertiary</subject><subject>Proteins and Nucleic Acids</subject><subject>Signal Transduction</subject><issn>0006-3495</issn><issn>1542-0086</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kV1r2zAUhsXoWNJuP2A3w9Cb3tg7-rTDYFBCvyDQQbtrIcvHqYwjZZJT6L-vQrrS7aJXEug5L6_OQ8hXChUFqr4PVbsdKgZUVqAqkOwDmVMpWAnQqCMyBwBVcrGQM3Kc0gBAmQT6icyYYkLUgs4J3D9gcefW3ozOr4u7yUxYhL64jcavsViaGCb0wXXFr_3N-c_kY2_GhF9ezhPy-_Lifnldrm6vbpbnq9KKejGVSvW0bU3TQN9KSqHnTasorxmnvZUsd5LIGRjZddxYhcLUrJM9qE4p1ljOT8jPQ-52126ws-inaEa9jW5j4pMOxul_X7x70OvwqIWsc7zKAWcvATH82WGa9MYli-NoPIZd0rQGpuSCM5bR0__QIexiXsmBanJxITJFD5SNIaWI_WsZCnrvQw86-9B7HxqUzj7yzLe3v3id-CsgAz8OAOZdPjqMOlmH3mLnItpJd8G9E_8MCqqZWw</recordid><startdate>20150804</startdate><enddate>20150804</enddate><creator>Maksimov, Eugene G.</creator><creator>Shirshin, Evgeny A.</creator><creator>Sluchanko, Nikolai N.</creator><creator>Zlenko, Dmitry V.</creator><creator>Parshina, Evgenia Y.</creator><creator>Tsoraev, Georgy V.</creator><creator>Klementiev, Konstantin E.</creator><creator>Budylin, Gleb S.</creator><creator>Schmitt, Franz-Josef</creator><creator>Friedrich, Thomas</creator><creator>Fadeev, Victor V.</creator><creator>Paschenko, Vladimir Z.</creator><creator>Rubin, Andrew B.</creator><general>Elsevier Inc</general><general>Biophysical Society</general><general>The Biophysical Society</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150804</creationdate><title>The Signaling State of Orange Carotenoid Protein</title><author>Maksimov, Eugene G. ; Shirshin, Evgeny A. ; Sluchanko, Nikolai N. ; Zlenko, Dmitry V. ; Parshina, Evgenia Y. ; Tsoraev, Georgy V. ; Klementiev, Konstantin E. ; Budylin, Gleb S. ; Schmitt, Franz-Josef ; Friedrich, Thomas ; Fadeev, Victor V. ; Paschenko, Vladimir Z. ; Rubin, Andrew B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c479t-66f1bba880fb5110f38b6137231fc524955e320a5dd3ac6e4a72d5f06d6628c33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Absorption, Radiation</topic><topic>Amino Acid Sequence</topic><topic>Bacterial proteins</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - metabolism</topic><topic>Biophysics</topic><topic>Cyanobacteria</topic><topic>Cyanobacteria - chemistry</topic><topic>Fluorescent Dyes - pharmacology</topic><topic>Kinetics</topic><topic>Luminescent Proteins - chemistry</topic><topic>Luminescent Proteins - metabolism</topic><topic>Molecular Dynamics Simulation</topic><topic>Molecular Sequence Data</topic><topic>Protein Binding</topic><topic>Protein Structure, Tertiary</topic><topic>Proteins and Nucleic Acids</topic><topic>Signal Transduction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maksimov, Eugene G.</creatorcontrib><creatorcontrib>Shirshin, Evgeny A.</creatorcontrib><creatorcontrib>Sluchanko, Nikolai N.</creatorcontrib><creatorcontrib>Zlenko, Dmitry V.</creatorcontrib><creatorcontrib>Parshina, Evgenia Y.</creatorcontrib><creatorcontrib>Tsoraev, Georgy V.</creatorcontrib><creatorcontrib>Klementiev, Konstantin E.</creatorcontrib><creatorcontrib>Budylin, Gleb S.</creatorcontrib><creatorcontrib>Schmitt, Franz-Josef</creatorcontrib><creatorcontrib>Friedrich, Thomas</creatorcontrib><creatorcontrib>Fadeev, Victor V.</creatorcontrib><creatorcontrib>Paschenko, Vladimir Z.</creatorcontrib><creatorcontrib>Rubin, Andrew B.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biophysical journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maksimov, Eugene G.</au><au>Shirshin, Evgeny A.</au><au>Sluchanko, Nikolai N.</au><au>Zlenko, Dmitry V.</au><au>Parshina, Evgenia Y.</au><au>Tsoraev, Georgy V.</au><au>Klementiev, Konstantin E.</au><au>Budylin, Gleb S.</au><au>Schmitt, Franz-Josef</au><au>Friedrich, Thomas</au><au>Fadeev, Victor V.</au><au>Paschenko, Vladimir Z.</au><au>Rubin, Andrew B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The Signaling State of Orange Carotenoid Protein</atitle><jtitle>Biophysical journal</jtitle><addtitle>Biophys J</addtitle><date>2015-08-04</date><risdate>2015</risdate><volume>109</volume><issue>3</issue><spage>595</spage><epage>607</epage><pages>595-607</pages><issn>0006-3495</issn><eissn>1542-0086</eissn><abstract>Orange carotenoid protein (OCP) is the photoactive protein that is responsible for high light tolerance in cyanobacteria. We studied the kinetics of the OCP photocycle by monitoring changes in its absorption spectrum, intrinsic fluorescence, and fluorescence of the Nile red dye bound to OCP. It was demonstrated that all of these three methods provide the same kinetic parameters of the photocycle, namely, the kinetics of OCP relaxation in darkness was biexponential with a ratio of two components equal to 2:1 independently of temperature. Whereas the changes of the absorption spectrum of OCP characterize the geometry and environment of its chromophore, the intrinsic fluorescence of OCP reveals changes in its tertiary structure, and the fluorescence properties of Nile red indicate the exposure of hydrophobic surface areas of OCP to the solvent following the photocycle. The results of molecular-dynamics studies indicated the presence of two metastable conformations of 3′-hydroxyechinenone, which is consistent with characteristic changes in the Raman spectra. We conclude that rotation of the β-ionylidene ring in the C-terminal domain of OCP could be one of the first conformational rearrangements that occur during photoactivation. The obtained results suggest that the photoactivated form of OCP represents a molten globule-like state that is characterized by increased mobility of tertiary structure elements and solvent accessibility.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>26244741</pmid><doi>10.1016/j.bpj.2015.06.052</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Absorption, Radiation Amino Acid Sequence Bacterial proteins Bacterial Proteins - chemistry Bacterial Proteins - metabolism Biophysics Cyanobacteria Cyanobacteria - chemistry Fluorescent Dyes - pharmacology Kinetics Luminescent Proteins - chemistry Luminescent Proteins - metabolism Molecular Dynamics Simulation Molecular Sequence Data Protein Binding Protein Structure, Tertiary Proteins and Nucleic Acids Signal Transduction |
title | The Signaling State of Orange Carotenoid Protein |
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