The evolution of Campylobacter jejuni and Campylobacter coli
The global significance of Campylobacter jejuni and Campylobacter coli as gastrointestinal human pathogens has motivated numerous studies to characterize their population biology and evolution. These bacteria are a common component of the intestinal microbiota of numerous bird and mammal species and...
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Veröffentlicht in: | Cold Spring Harbor perspectives in biology 2015-08, Vol.7 (8), p.a018119-a018119 |
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description | The global significance of Campylobacter jejuni and Campylobacter coli as gastrointestinal human pathogens has motivated numerous studies to characterize their population biology and evolution. These bacteria are a common component of the intestinal microbiota of numerous bird and mammal species and cause disease in humans, typically via consumption of contaminated meat products, especially poultry meat. Sequence-based molecular typing methods, such as multilocus sequence typing (MLST) and whole genome sequencing (WGS), have been instructive for understanding the epidemiology and evolution of these bacteria and how phenotypic variation relates to the high degree of genetic structuring in C. coli and C. jejuni populations. Here, we describe aspects of the relatively short history of coevolution between humans and pathogenic Campylobacter, by reviewing research investigating how mutation and lateral or horizontal gene transfer (LGT or HGT, respectively) interact to create the observed population structure. These genetic changes occur in a complex fitness landscape with divergent ecologies, including multiple host species, which can lead to rapid adaptation, for example, through frame-shift mutations that alter gene expression or the acquisition of novel genetic elements by HGT. Recombination is a particularly strong evolutionary force in Campylobacter, leading to the emergence of new lineages and even large-scale genome-wide interspecies introgression between C. jejuni and C. coli. The increasing availability of large genome datasets is enhancing understanding of Campylobacter evolution through the application of methods, such as genome-wide association studies, but MLST-derived clonal complex designations remain a useful method for describing population structure. |
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These bacteria are a common component of the intestinal microbiota of numerous bird and mammal species and cause disease in humans, typically via consumption of contaminated meat products, especially poultry meat. Sequence-based molecular typing methods, such as multilocus sequence typing (MLST) and whole genome sequencing (WGS), have been instructive for understanding the epidemiology and evolution of these bacteria and how phenotypic variation relates to the high degree of genetic structuring in C. coli and C. jejuni populations. Here, we describe aspects of the relatively short history of coevolution between humans and pathogenic Campylobacter, by reviewing research investigating how mutation and lateral or horizontal gene transfer (LGT or HGT, respectively) interact to create the observed population structure. These genetic changes occur in a complex fitness landscape with divergent ecologies, including multiple host species, which can lead to rapid adaptation, for example, through frame-shift mutations that alter gene expression or the acquisition of novel genetic elements by HGT. Recombination is a particularly strong evolutionary force in Campylobacter, leading to the emergence of new lineages and even large-scale genome-wide interspecies introgression between C. jejuni and C. coli. 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These bacteria are a common component of the intestinal microbiota of numerous bird and mammal species and cause disease in humans, typically via consumption of contaminated meat products, especially poultry meat. Sequence-based molecular typing methods, such as multilocus sequence typing (MLST) and whole genome sequencing (WGS), have been instructive for understanding the epidemiology and evolution of these bacteria and how phenotypic variation relates to the high degree of genetic structuring in C. coli and C. jejuni populations. Here, we describe aspects of the relatively short history of coevolution between humans and pathogenic Campylobacter, by reviewing research investigating how mutation and lateral or horizontal gene transfer (LGT or HGT, respectively) interact to create the observed population structure. These genetic changes occur in a complex fitness landscape with divergent ecologies, including multiple host species, which can lead to rapid adaptation, for example, through frame-shift mutations that alter gene expression or the acquisition of novel genetic elements by HGT. Recombination is a particularly strong evolutionary force in Campylobacter, leading to the emergence of new lineages and even large-scale genome-wide interspecies introgression between C. jejuni and C. coli. The increasing availability of large genome datasets is enhancing understanding of Campylobacter evolution through the application of methods, such as genome-wide association studies, but MLST-derived clonal complex designations remain a useful method for describing population structure.</description><subject>Adaptation, Physiological - genetics</subject><subject>Campylobacter coli - genetics</subject><subject>Campylobacter coli - physiology</subject><subject>Campylobacter jejuni - genetics</subject><subject>Campylobacter jejuni - physiology</subject><subject>Evolution, Molecular</subject><subject>PERSPECTIVES</subject><subject>Recombination, Genetic</subject><issn>1943-0264</issn><issn>1943-0264</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkF1LwzAUhoMobk5_gSC99KYzJ2nTFkSQ4hcMvJnXIU1PXEfb1KQd7N9b2RzTq3Pg_TiHh5BroHMACnfarzp0vkPdzxWFFCA7IVPIIh5SJqLTo31CLrxfUypElopzMmFiLKApnZL75QoD3Nh66CvbBtYEuWq6bW0LpXt0wRrXQ1sFqi3_CdrW1SU5M6r2eLWfM_Lx_LTMX8PF-8tb_rgINRe0D8vIpCrSOipVojJgwA0rYsSCF9poLAAMjH-pCHSCoixjNCBiDjozhlFh-Iw87Hq7oWiw1Nj2TtWyc1Wj3FZaVcm_Slut5KfdyChmIonpWHC7L3D2a0Dfy6byGutatWgHLyEZ-WU8Fmy08p1VO-u9Q3M4A1T-cJdH3OWe-5i6Of7wkPkFzb8BX_eEgA</recordid><startdate>20150801</startdate><enddate>20150801</enddate><creator>Sheppard, Samuel K</creator><creator>Maiden, Martin C J</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150801</creationdate><title>The evolution of Campylobacter jejuni and Campylobacter coli</title><author>Sheppard, Samuel K ; Maiden, Martin C J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c360t-d4f8a4cc4da7a91213f2b5eeb3bcfceb11f1986a41c7e6dd5ef16531c9ff206f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adaptation, Physiological - genetics</topic><topic>Campylobacter coli - genetics</topic><topic>Campylobacter coli - physiology</topic><topic>Campylobacter jejuni - genetics</topic><topic>Campylobacter jejuni - physiology</topic><topic>Evolution, Molecular</topic><topic>PERSPECTIVES</topic><topic>Recombination, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sheppard, Samuel K</creatorcontrib><creatorcontrib>Maiden, Martin C J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Cold Spring Harbor perspectives in biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sheppard, Samuel K</au><au>Maiden, Martin C J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The evolution of Campylobacter jejuni and Campylobacter coli</atitle><jtitle>Cold Spring Harbor perspectives in biology</jtitle><addtitle>Cold Spring Harb Perspect Biol</addtitle><date>2015-08-01</date><risdate>2015</risdate><volume>7</volume><issue>8</issue><spage>a018119</spage><epage>a018119</epage><pages>a018119-a018119</pages><issn>1943-0264</issn><eissn>1943-0264</eissn><abstract>The global significance of Campylobacter jejuni and Campylobacter coli as gastrointestinal human pathogens has motivated numerous studies to characterize their population biology and evolution. These bacteria are a common component of the intestinal microbiota of numerous bird and mammal species and cause disease in humans, typically via consumption of contaminated meat products, especially poultry meat. Sequence-based molecular typing methods, such as multilocus sequence typing (MLST) and whole genome sequencing (WGS), have been instructive for understanding the epidemiology and evolution of these bacteria and how phenotypic variation relates to the high degree of genetic structuring in C. coli and C. jejuni populations. Here, we describe aspects of the relatively short history of coevolution between humans and pathogenic Campylobacter, by reviewing research investigating how mutation and lateral or horizontal gene transfer (LGT or HGT, respectively) interact to create the observed population structure. These genetic changes occur in a complex fitness landscape with divergent ecologies, including multiple host species, which can lead to rapid adaptation, for example, through frame-shift mutations that alter gene expression or the acquisition of novel genetic elements by HGT. Recombination is a particularly strong evolutionary force in Campylobacter, leading to the emergence of new lineages and even large-scale genome-wide interspecies introgression between C. jejuni and C. coli. The increasing availability of large genome datasets is enhancing understanding of Campylobacter evolution through the application of methods, such as genome-wide association studies, but MLST-derived clonal complex designations remain a useful method for describing population structure.</abstract><cop>United States</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>26101080</pmid><doi>10.1101/cshperspect.a018119</doi><oa>free_for_read</oa></addata></record> |
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subjects | Adaptation, Physiological - genetics Campylobacter coli - genetics Campylobacter coli - physiology Campylobacter jejuni - genetics Campylobacter jejuni - physiology Evolution, Molecular PERSPECTIVES Recombination, Genetic |
title | The evolution of Campylobacter jejuni and Campylobacter coli |
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