Mutations in apoptosis-inducing factor cause X-linked recessive auditory neuropathy spectrum disorder

BackgroundAuditory neuropathy spectrum disorder (ANSD) is a form of hearing loss in which auditory signal transmission from the inner ear to the auditory nerve and brain stem is distorted, giving rise to speech perception difficulties beyond that expected for the observed degree of hearing loss. For...

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Veröffentlicht in:Journal of medical genetics 2015-08, Vol.52 (8), p.523-531
Hauptverfasser: Zong, Liang, Guan, Jing, Ealy, Megan, Zhang, Qiujing, Wang, Dayong, Wang, Hongyang, Zhao, Yali, Shen, Zhirong, Campbell, Colleen A, Wang, Fengchao, Yang, Ju, Sun, Wei, Lan, Lan, Ding, Dalian, Xie, Linyi, Qi, Yue, Lou, Xin, Huang, Xusheng, Shi, Qiang, Chang, Suhua, Xiong, Wenping, Yin, Zifang, Yu, Ning, Zhao, Hui, Wang, Jun, Wang, Jing, Salvi, Richard J, Petit, Christine, Smith, Richard J H, Wang, Qiuju
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container_end_page 531
container_issue 8
container_start_page 523
container_title Journal of medical genetics
container_volume 52
creator Zong, Liang
Guan, Jing
Ealy, Megan
Zhang, Qiujing
Wang, Dayong
Wang, Hongyang
Zhao, Yali
Shen, Zhirong
Campbell, Colleen A
Wang, Fengchao
Yang, Ju
Sun, Wei
Lan, Lan
Ding, Dalian
Xie, Linyi
Qi, Yue
Lou, Xin
Huang, Xusheng
Shi, Qiang
Chang, Suhua
Xiong, Wenping
Yin, Zifang
Yu, Ning
Zhao, Hui
Wang, Jun
Wang, Jing
Salvi, Richard J
Petit, Christine
Smith, Richard J H
Wang, Qiuju
description BackgroundAuditory neuropathy spectrum disorder (ANSD) is a form of hearing loss in which auditory signal transmission from the inner ear to the auditory nerve and brain stem is distorted, giving rise to speech perception difficulties beyond that expected for the observed degree of hearing loss. For many cases of ANSD, the underlying molecular pathology and the site of lesion remain unclear. The X-linked form of the condition, AUNX1, has been mapped to Xq23-q27.3, although the causative gene has yet to be identified.MethodsWe performed whole-exome sequencing on DNA samples from the AUNX1 family and another small phenotypically similar but unrelated ANSD family.ResultsWe identified two missense mutations in AIFM1 in these families: c.1352G>A (p.R451Q) in the AUNX1 family and c.1030C>T (p.L344F) in the second ANSD family. Mutation screening in a large cohort of 3 additional unrelated families and 93 sporadic cases with ANSD identified 9 more missense mutations in AIFM1. Bioinformatics analysis and expression studies support this gene as being causative of ANSD.ConclusionsVariants in AIFM1 gene are a common cause of familial and sporadic ANSD and provide insight into the expanded spectrum of AIFM1-associated diseases. The finding of cochlear nerve hypoplasia in some patients was AIFM1-related ANSD implies that MRI may be of value in localising the site of lesion and suggests that cochlea implantation in these patients may have limited success.
doi_str_mv 10.1136/jmedgenet-2014-102961
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For many cases of ANSD, the underlying molecular pathology and the site of lesion remain unclear. The X-linked form of the condition, AUNX1, has been mapped to Xq23-q27.3, although the causative gene has yet to be identified.MethodsWe performed whole-exome sequencing on DNA samples from the AUNX1 family and another small phenotypically similar but unrelated ANSD family.ResultsWe identified two missense mutations in AIFM1 in these families: c.1352G&gt;A (p.R451Q) in the AUNX1 family and c.1030C&gt;T (p.L344F) in the second ANSD family. Mutation screening in a large cohort of 3 additional unrelated families and 93 sporadic cases with ANSD identified 9 more missense mutations in AIFM1. Bioinformatics analysis and expression studies support this gene as being causative of ANSD.ConclusionsVariants in AIFM1 gene are a common cause of familial and sporadic ANSD and provide insight into the expanded spectrum of AIFM1-associated diseases. The finding of cochlear nerve hypoplasia in some patients was AIFM1-related ANSD implies that MRI may be of value in localising the site of lesion and suggests that cochlea implantation in these patients may have limited success.</description><identifier>ISSN: 0022-2593</identifier><identifier>EISSN: 1468-6244</identifier><identifier>DOI: 10.1136/jmedgenet-2014-102961</identifier><identifier>PMID: 25986071</identifier><language>eng</language><publisher>England: BMJ Publishing Group Ltd</publisher><subject>Animals ; Apoptosis Inducing Factor - chemistry ; Apoptosis Inducing Factor - genetics ; Auditory neuropathy spectrum disorder ; Chromosome Mapping ; Clinical genetics ; Cohort Studies ; DNA Mutational Analysis ; Electromyography ; Exome - genetics ; Female ; Genes ; Genes, X-Linked ; Genetic heterogeneity ; Genotype &amp; phenotype ; Hearing Loss, Central - genetics ; Hearing Loss, Central - pathology ; Humans ; Kinases ; Male ; Mice ; Mutation ; Mutation, Missense ; New Loci ; Pedigree ; Protein Structure, Tertiary</subject><ispartof>Journal of medical genetics, 2015-08, Vol.52 (8), p.523-531</ispartof><rights>Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions</rights><rights>Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.</rights><rights>Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions 2015 This is an Open Access article distributed in accordance with the terms of the Creative Commons Attribution (CC BY 4.0) license, which permits others to distribute, remix, adapt and build upon this work, for commercial use, provided the original work is properly cited. See: http://creativecommons.org/licenses/by/4.0/ Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b621t-e271f235433572c45668823e967ee4eb958f662c2f1e4915486c0f8862edb8a23</citedby><cites>FETCH-LOGICAL-b621t-e271f235433572c45668823e967ee4eb958f662c2f1e4915486c0f8862edb8a23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://jmg.bmj.com/content/52/8/523.full.pdf$$EPDF$$P50$$Gbmj$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://jmg.bmj.com/content/52/8/523.full$$EHTML$$P50$$Gbmj$$Hfree_for_read</linktohtml><link.rule.ids>114,115,230,314,776,780,881,3183,23550,27901,27902,55321,77342,77373,77401,77427</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25986071$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zong, Liang</creatorcontrib><creatorcontrib>Guan, Jing</creatorcontrib><creatorcontrib>Ealy, Megan</creatorcontrib><creatorcontrib>Zhang, Qiujing</creatorcontrib><creatorcontrib>Wang, Dayong</creatorcontrib><creatorcontrib>Wang, Hongyang</creatorcontrib><creatorcontrib>Zhao, Yali</creatorcontrib><creatorcontrib>Shen, Zhirong</creatorcontrib><creatorcontrib>Campbell, Colleen A</creatorcontrib><creatorcontrib>Wang, Fengchao</creatorcontrib><creatorcontrib>Yang, Ju</creatorcontrib><creatorcontrib>Sun, Wei</creatorcontrib><creatorcontrib>Lan, Lan</creatorcontrib><creatorcontrib>Ding, Dalian</creatorcontrib><creatorcontrib>Xie, Linyi</creatorcontrib><creatorcontrib>Qi, Yue</creatorcontrib><creatorcontrib>Lou, Xin</creatorcontrib><creatorcontrib>Huang, Xusheng</creatorcontrib><creatorcontrib>Shi, Qiang</creatorcontrib><creatorcontrib>Chang, Suhua</creatorcontrib><creatorcontrib>Xiong, Wenping</creatorcontrib><creatorcontrib>Yin, Zifang</creatorcontrib><creatorcontrib>Yu, Ning</creatorcontrib><creatorcontrib>Zhao, Hui</creatorcontrib><creatorcontrib>Wang, Jun</creatorcontrib><creatorcontrib>Wang, Jing</creatorcontrib><creatorcontrib>Salvi, Richard J</creatorcontrib><creatorcontrib>Petit, Christine</creatorcontrib><creatorcontrib>Smith, Richard J H</creatorcontrib><creatorcontrib>Wang, Qiuju</creatorcontrib><title>Mutations in apoptosis-inducing factor cause X-linked recessive auditory neuropathy spectrum disorder</title><title>Journal of medical genetics</title><addtitle>J Med Genet</addtitle><addtitle>J Med Genet</addtitle><description>BackgroundAuditory neuropathy spectrum disorder (ANSD) is a form of hearing loss in which auditory signal transmission from the inner ear to the auditory nerve and brain stem is distorted, giving rise to speech perception difficulties beyond that expected for the observed degree of hearing loss. For many cases of ANSD, the underlying molecular pathology and the site of lesion remain unclear. The X-linked form of the condition, AUNX1, has been mapped to Xq23-q27.3, although the causative gene has yet to be identified.MethodsWe performed whole-exome sequencing on DNA samples from the AUNX1 family and another small phenotypically similar but unrelated ANSD family.ResultsWe identified two missense mutations in AIFM1 in these families: c.1352G&gt;A (p.R451Q) in the AUNX1 family and c.1030C&gt;T (p.L344F) in the second ANSD family. Mutation screening in a large cohort of 3 additional unrelated families and 93 sporadic cases with ANSD identified 9 more missense mutations in AIFM1. Bioinformatics analysis and expression studies support this gene as being causative of ANSD.ConclusionsVariants in AIFM1 gene are a common cause of familial and sporadic ANSD and provide insight into the expanded spectrum of AIFM1-associated diseases. The finding of cochlear nerve hypoplasia in some patients was AIFM1-related ANSD implies that MRI may be of value in localising the site of lesion and suggests that cochlea implantation in these patients may have limited success.</description><subject>Animals</subject><subject>Apoptosis Inducing Factor - chemistry</subject><subject>Apoptosis Inducing Factor - genetics</subject><subject>Auditory neuropathy spectrum disorder</subject><subject>Chromosome Mapping</subject><subject>Clinical genetics</subject><subject>Cohort Studies</subject><subject>DNA Mutational Analysis</subject><subject>Electromyography</subject><subject>Exome - genetics</subject><subject>Female</subject><subject>Genes</subject><subject>Genes, X-Linked</subject><subject>Genetic heterogeneity</subject><subject>Genotype &amp; phenotype</subject><subject>Hearing Loss, Central - genetics</subject><subject>Hearing Loss, Central - pathology</subject><subject>Humans</subject><subject>Kinases</subject><subject>Male</subject><subject>Mice</subject><subject>Mutation</subject><subject>Mutation, Missense</subject><subject>New Loci</subject><subject>Pedigree</subject><subject>Protein Structure, Tertiary</subject><issn>0022-2593</issn><issn>1468-6244</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>9YT</sourceid><sourceid>ACMMV</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkc2KFDEUhYMoTjv6CErAjZvSJJWkUhtBhvEHRtwouAup1K2etFVJmZ-BfnvT9NijLmRWgeQ7Hzf3IPSckteUtvLNboFxCx5ywwjlDSWsl_QB2lAuVSMZ5w_RhhDGGib69gw9SWlHCG07Kh-js3qnJOnoBsHnkk12wSfsPDZrWHNILjXOj8U6v8WTsTlEbE1JgL83s_M_YMQRLKTkbgCbMroK7LGHEsNq8vUepxVsjmXBo0shjhCfokeTmRM8uz3P0bf3l18vPjZXXz58unh31QyS0dwA6-jEWsHbVnTMciGlUqyFXnYAHIZeqElKZtlEgfdUcCUtmZSSDMZBGdaeo7dH71qGuh8LPkcz6zW6xcS9Dsbpv1-8u9bbcKO5oKprRRW8uhXE8LNAynpxycI8Gw-hJE0VUVIoeR9U9qqXbS8O6Mt_0F0o0ddNVKGsxk5SUilxpGwMKUWYTnNTog-d61Pn-tC5PnZecy_-_PQp9bvkCpAjMCy7ezvpXeRu2P9mfgE548se</recordid><startdate>20150801</startdate><enddate>20150801</enddate><creator>Zong, Liang</creator><creator>Guan, Jing</creator><creator>Ealy, Megan</creator><creator>Zhang, Qiujing</creator><creator>Wang, Dayong</creator><creator>Wang, Hongyang</creator><creator>Zhao, Yali</creator><creator>Shen, Zhirong</creator><creator>Campbell, Colleen A</creator><creator>Wang, Fengchao</creator><creator>Yang, Ju</creator><creator>Sun, Wei</creator><creator>Lan, Lan</creator><creator>Ding, Dalian</creator><creator>Xie, Linyi</creator><creator>Qi, Yue</creator><creator>Lou, Xin</creator><creator>Huang, Xusheng</creator><creator>Shi, Qiang</creator><creator>Chang, Suhua</creator><creator>Xiong, Wenping</creator><creator>Yin, Zifang</creator><creator>Yu, Ning</creator><creator>Zhao, Hui</creator><creator>Wang, Jun</creator><creator>Wang, Jing</creator><creator>Salvi, Richard J</creator><creator>Petit, Christine</creator><creator>Smith, Richard J H</creator><creator>Wang, Qiuju</creator><general>BMJ Publishing Group Ltd</general><general>BMJ Publishing Group LTD</general><general>BMJ Publishing Group</general><scope>9YT</scope><scope>ACMMV</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BTHHO</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20150801</creationdate><title>Mutations in apoptosis-inducing factor cause X-linked recessive auditory neuropathy spectrum disorder</title><author>Zong, Liang ; Guan, Jing ; Ealy, Megan ; Zhang, Qiujing ; Wang, Dayong ; Wang, Hongyang ; Zhao, Yali ; Shen, Zhirong ; Campbell, Colleen A ; Wang, Fengchao ; Yang, Ju ; Sun, Wei ; Lan, Lan ; Ding, Dalian ; Xie, Linyi ; Qi, Yue ; Lou, Xin ; Huang, Xusheng ; Shi, Qiang ; Chang, Suhua ; Xiong, Wenping ; Yin, Zifang ; Yu, Ning ; Zhao, Hui ; Wang, Jun ; Wang, Jing ; Salvi, Richard J ; Petit, Christine ; Smith, Richard J H ; Wang, Qiuju</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b621t-e271f235433572c45668823e967ee4eb958f662c2f1e4915486c0f8862edb8a23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Animals</topic><topic>Apoptosis Inducing Factor - chemistry</topic><topic>Apoptosis Inducing Factor - genetics</topic><topic>Auditory neuropathy spectrum disorder</topic><topic>Chromosome Mapping</topic><topic>Clinical genetics</topic><topic>Cohort Studies</topic><topic>DNA Mutational Analysis</topic><topic>Electromyography</topic><topic>Exome - genetics</topic><topic>Female</topic><topic>Genes</topic><topic>Genes, X-Linked</topic><topic>Genetic heterogeneity</topic><topic>Genotype &amp; phenotype</topic><topic>Hearing Loss, Central - genetics</topic><topic>Hearing Loss, Central - pathology</topic><topic>Humans</topic><topic>Kinases</topic><topic>Male</topic><topic>Mice</topic><topic>Mutation</topic><topic>Mutation, Missense</topic><topic>New Loci</topic><topic>Pedigree</topic><topic>Protein Structure, Tertiary</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zong, Liang</creatorcontrib><creatorcontrib>Guan, Jing</creatorcontrib><creatorcontrib>Ealy, Megan</creatorcontrib><creatorcontrib>Zhang, Qiujing</creatorcontrib><creatorcontrib>Wang, Dayong</creatorcontrib><creatorcontrib>Wang, Hongyang</creatorcontrib><creatorcontrib>Zhao, Yali</creatorcontrib><creatorcontrib>Shen, Zhirong</creatorcontrib><creatorcontrib>Campbell, Colleen A</creatorcontrib><creatorcontrib>Wang, Fengchao</creatorcontrib><creatorcontrib>Yang, Ju</creatorcontrib><creatorcontrib>Sun, Wei</creatorcontrib><creatorcontrib>Lan, Lan</creatorcontrib><creatorcontrib>Ding, Dalian</creatorcontrib><creatorcontrib>Xie, Linyi</creatorcontrib><creatorcontrib>Qi, Yue</creatorcontrib><creatorcontrib>Lou, Xin</creatorcontrib><creatorcontrib>Huang, Xusheng</creatorcontrib><creatorcontrib>Shi, Qiang</creatorcontrib><creatorcontrib>Chang, Suhua</creatorcontrib><creatorcontrib>Xiong, Wenping</creatorcontrib><creatorcontrib>Yin, Zifang</creatorcontrib><creatorcontrib>Yu, Ning</creatorcontrib><creatorcontrib>Zhao, Hui</creatorcontrib><creatorcontrib>Wang, Jun</creatorcontrib><creatorcontrib>Wang, Jing</creatorcontrib><creatorcontrib>Salvi, Richard J</creatorcontrib><creatorcontrib>Petit, Christine</creatorcontrib><creatorcontrib>Smith, Richard J H</creatorcontrib><creatorcontrib>Wang, Qiuju</creatorcontrib><collection>BMJ Open Access Journals</collection><collection>BMJ Journals:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health &amp; 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For many cases of ANSD, the underlying molecular pathology and the site of lesion remain unclear. The X-linked form of the condition, AUNX1, has been mapped to Xq23-q27.3, although the causative gene has yet to be identified.MethodsWe performed whole-exome sequencing on DNA samples from the AUNX1 family and another small phenotypically similar but unrelated ANSD family.ResultsWe identified two missense mutations in AIFM1 in these families: c.1352G&gt;A (p.R451Q) in the AUNX1 family and c.1030C&gt;T (p.L344F) in the second ANSD family. Mutation screening in a large cohort of 3 additional unrelated families and 93 sporadic cases with ANSD identified 9 more missense mutations in AIFM1. Bioinformatics analysis and expression studies support this gene as being causative of ANSD.ConclusionsVariants in AIFM1 gene are a common cause of familial and sporadic ANSD and provide insight into the expanded spectrum of AIFM1-associated diseases. The finding of cochlear nerve hypoplasia in some patients was AIFM1-related ANSD implies that MRI may be of value in localising the site of lesion and suggests that cochlea implantation in these patients may have limited success.</abstract><cop>England</cop><pub>BMJ Publishing Group Ltd</pub><pmid>25986071</pmid><doi>10.1136/jmedgenet-2014-102961</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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1468-6244
language eng
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source MEDLINE; BMJ Journals - NESLi2
subjects Animals
Apoptosis Inducing Factor - chemistry
Apoptosis Inducing Factor - genetics
Auditory neuropathy spectrum disorder
Chromosome Mapping
Clinical genetics
Cohort Studies
DNA Mutational Analysis
Electromyography
Exome - genetics
Female
Genes
Genes, X-Linked
Genetic heterogeneity
Genotype & phenotype
Hearing Loss, Central - genetics
Hearing Loss, Central - pathology
Humans
Kinases
Male
Mice
Mutation
Mutation, Missense
New Loci
Pedigree
Protein Structure, Tertiary
title Mutations in apoptosis-inducing factor cause X-linked recessive auditory neuropathy spectrum disorder
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