The genetics of rhizosheath size in a multiparent mapping population of wheat
Rhizosheaths comprise soil that adheres to plant roots and, in some species, are indicative of root hair length. In this study, the genetics of rhizosheath size in wheat was investigated by screening the progeny of multiparent advanced generation intercrosses (MAGIC). Two MAGIC populations were scre...
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Veröffentlicht in: | Journal of experimental botany 2015-08, Vol.66 (15), p.4527-4536 |
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description | Rhizosheaths comprise soil that adheres to plant roots and, in some species, are indicative of root hair length. In this study, the genetics of rhizosheath size in wheat was investigated by screening the progeny of multiparent advanced generation intercrosses (MAGIC). Two MAGIC populations were screened for rhizosheath size using a high throughput method. One MAGIC population was developed from intercrosses between four parents (4-way) and the other from intercrosses between eight parents (8-way). Transgressive segregation for rhizosheath size was observed in both the 4-way and 8-way MAGIC populations. A quantitative trait loci (QTL) analysis of the 4-way population identified six major loci located on chromosomes 2B, 4D, 5A, 5B, 6A, and 7A together accounting for 42% of the variation in rhizosheath size. Rhizosheath size was strongly correlated with root hair length and was robust across different soil types in the absence of chemical constraints. Rhizosheath size in the MAGIC populations was a reliable surrogate for root hair length and, therefore, the QTL identified probably control root hair elongation. Members of the basic helix-loop-helix family of transcription factors have previously been identified to regulate root hair length in Arabidopsis and rice. Since several wheat members of the basic helix-loop-helix family of genes are located within or near the QTL, these genes are candidates for controlling the long root hair trait. The QTL for rhizosheath size identified in this study provides the opportunity to implement marker-assisted selection to increase root hair length for improved phosphate acquisition in wheat. |
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In this study, the genetics of rhizosheath size in wheat was investigated by screening the progeny of multiparent advanced generation intercrosses (MAGIC). Two MAGIC populations were screened for rhizosheath size using a high throughput method. One MAGIC population was developed from intercrosses between four parents (4-way) and the other from intercrosses between eight parents (8-way). Transgressive segregation for rhizosheath size was observed in both the 4-way and 8-way MAGIC populations. A quantitative trait loci (QTL) analysis of the 4-way population identified six major loci located on chromosomes 2B, 4D, 5A, 5B, 6A, and 7A together accounting for 42% of the variation in rhizosheath size. Rhizosheath size was strongly correlated with root hair length and was robust across different soil types in the absence of chemical constraints. Rhizosheath size in the MAGIC populations was a reliable surrogate for root hair length and, therefore, the QTL identified probably control root hair elongation. Members of the basic helix-loop-helix family of transcription factors have previously been identified to regulate root hair length in Arabidopsis and rice. Since several wheat members of the basic helix-loop-helix family of genes are located within or near the QTL, these genes are candidates for controlling the long root hair trait. The QTL for rhizosheath size identified in this study provides the opportunity to implement marker-assisted selection to increase root hair length for improved phosphate acquisition in wheat.</description><identifier>ISSN: 0022-0957</identifier><identifier>EISSN: 1460-2431</identifier><identifier>DOI: 10.1093/jxb/erv223</identifier><identifier>PMID: 25969556</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Arabidopsis ; Chromosome Mapping ; High-Throughput Nucleotide Sequencing ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant Roots - genetics ; Plant Roots - metabolism ; Quantitative Trait Loci ; RESEARCH PAPER ; Soil ; Triticum - genetics ; Triticum - metabolism ; Triticum aestivum</subject><ispartof>Journal of experimental botany, 2015-08, Vol.66 (15), p.4527-4536</ispartof><rights>The Author 2015</rights><rights>The Author 2015. 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In this study, the genetics of rhizosheath size in wheat was investigated by screening the progeny of multiparent advanced generation intercrosses (MAGIC). Two MAGIC populations were screened for rhizosheath size using a high throughput method. One MAGIC population was developed from intercrosses between four parents (4-way) and the other from intercrosses between eight parents (8-way). Transgressive segregation for rhizosheath size was observed in both the 4-way and 8-way MAGIC populations. A quantitative trait loci (QTL) analysis of the 4-way population identified six major loci located on chromosomes 2B, 4D, 5A, 5B, 6A, and 7A together accounting for 42% of the variation in rhizosheath size. Rhizosheath size was strongly correlated with root hair length and was robust across different soil types in the absence of chemical constraints. Rhizosheath size in the MAGIC populations was a reliable surrogate for root hair length and, therefore, the QTL identified probably control root hair elongation. Members of the basic helix-loop-helix family of transcription factors have previously been identified to regulate root hair length in Arabidopsis and rice. Since several wheat members of the basic helix-loop-helix family of genes are located within or near the QTL, these genes are candidates for controlling the long root hair trait. The QTL for rhizosheath size identified in this study provides the opportunity to implement marker-assisted selection to increase root hair length for improved phosphate acquisition in wheat.</description><subject>Arabidopsis</subject><subject>Chromosome Mapping</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Roots - genetics</subject><subject>Plant Roots - metabolism</subject><subject>Quantitative Trait Loci</subject><subject>RESEARCH PAPER</subject><subject>Soil</subject><subject>Triticum - genetics</subject><subject>Triticum - metabolism</subject><subject>Triticum aestivum</subject><issn>0022-0957</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1v1DAUxC0Eokvhwh3kI0JK-_wdX5CqqgWkol7as-X1vmy8SuJgJwX615PVlkJPnN5hfjOapyHkLYMTBlac7n6uTzHfcS6ekRWTGiouBXtOVgCcV2CVOSKvStkBgAKlXpIjrqy2SukV-XbTIt3igFMMhaaG5jbep9Kin1pa4j3SOFBP-7mb4ugzDhPt_TjGYUvHNM6dn2Ia9r4fe8tr8qLxXcE3D_eY3F5e3Jx_qa6uP389P7uqgrR2qoTa2LqulQrMBs42TCNjtglYGw4gLHDBagFGasU981wozRtcYxAbNEKuxTH5dMgd53WPm7DUyr5zY469z79c8tE9VYbYum26c1KBMVouAR8eAnL6PmOZXB9LwK7zA6a5OGYEr4WUgv8f1bYGYZiCBf14QENOpWRsHhsxcPup3DKVO0y1wO___eER_bPNArw7ALsypfxX16K2ptbiN1mBmfI</recordid><startdate>20150801</startdate><enddate>20150801</enddate><creator>Delhaize, Emmanuel</creator><creator>Rathjen, Tina M.</creator><creator>Cavanagh, Colin R.</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20150801</creationdate><title>The genetics of rhizosheath size in a multiparent mapping population of wheat</title><author>Delhaize, Emmanuel ; Rathjen, Tina M. ; Cavanagh, Colin R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c499t-35d988855c19c21d16e119fce8720039023183074652a1a23562febec3de734b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Arabidopsis</topic><topic>Chromosome Mapping</topic><topic>High-Throughput Nucleotide Sequencing</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plant Roots - genetics</topic><topic>Plant Roots - metabolism</topic><topic>Quantitative Trait Loci</topic><topic>RESEARCH PAPER</topic><topic>Soil</topic><topic>Triticum - genetics</topic><topic>Triticum - metabolism</topic><topic>Triticum aestivum</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Delhaize, Emmanuel</creatorcontrib><creatorcontrib>Rathjen, Tina M.</creatorcontrib><creatorcontrib>Cavanagh, Colin R.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of experimental botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Delhaize, Emmanuel</au><au>Rathjen, Tina M.</au><au>Cavanagh, Colin R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The genetics of rhizosheath size in a multiparent mapping population of wheat</atitle><jtitle>Journal of experimental botany</jtitle><addtitle>J Exp Bot</addtitle><date>2015-08-01</date><risdate>2015</risdate><volume>66</volume><issue>15</issue><spage>4527</spage><epage>4536</epage><pages>4527-4536</pages><issn>0022-0957</issn><eissn>1460-2431</eissn><abstract>Rhizosheaths comprise soil that adheres to plant roots and, in some species, are indicative of root hair length. In this study, the genetics of rhizosheath size in wheat was investigated by screening the progeny of multiparent advanced generation intercrosses (MAGIC). Two MAGIC populations were screened for rhizosheath size using a high throughput method. One MAGIC population was developed from intercrosses between four parents (4-way) and the other from intercrosses between eight parents (8-way). Transgressive segregation for rhizosheath size was observed in both the 4-way and 8-way MAGIC populations. A quantitative trait loci (QTL) analysis of the 4-way population identified six major loci located on chromosomes 2B, 4D, 5A, 5B, 6A, and 7A together accounting for 42% of the variation in rhizosheath size. Rhizosheath size was strongly correlated with root hair length and was robust across different soil types in the absence of chemical constraints. Rhizosheath size in the MAGIC populations was a reliable surrogate for root hair length and, therefore, the QTL identified probably control root hair elongation. Members of the basic helix-loop-helix family of transcription factors have previously been identified to regulate root hair length in Arabidopsis and rice. Since several wheat members of the basic helix-loop-helix family of genes are located within or near the QTL, these genes are candidates for controlling the long root hair trait. The QTL for rhizosheath size identified in this study provides the opportunity to implement marker-assisted selection to increase root hair length for improved phosphate acquisition in wheat.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>25969556</pmid><doi>10.1093/jxb/erv223</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Arabidopsis Chromosome Mapping High-Throughput Nucleotide Sequencing Plant Proteins - genetics Plant Proteins - metabolism Plant Roots - genetics Plant Roots - metabolism Quantitative Trait Loci RESEARCH PAPER Soil Triticum - genetics Triticum - metabolism Triticum aestivum |
title | The genetics of rhizosheath size in a multiparent mapping population of wheat |
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