Tau Assembly: The Dominant Role of PHF6 (VQIVYK) in Microtubule Binding Region Repeat R3
Self-aggregation of the microtubule-binding protein Tau reduces its functionality and is tightly associated with Tau-related diseases, termed tauopathies. Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, usi...
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Veröffentlicht in: | The journal of physical chemistry. B 2015-04, Vol.119 (13), p.4582-4593 |
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description | Self-aggregation of the microtubule-binding protein Tau reduces its functionality and is tightly associated with Tau-related diseases, termed tauopathies. Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, using experiments and computational modeling, we study the self-assembly of individual and binary mixtures of Tau fragments containing PHF6* (R2/wt; 273GKVQIINKKLDL284) and PHF6 (R3/wt; 306 VQIVYKPVDLSK317) and a mutant R2/ΔK280 associated with a neurodegenerative tauopathy. The initial stage of aggregation is probed by ion-mobility mass spectrometry, the kinetics of aggregation monitored with Thioflavin T assays, and the morphology of aggregates visualized by transmission electron microscopy. Insights into the structure of early aggregates and the factors stabilizing the aggregates are obtained from replica exchange molecular dynamics simulations. Our data suggest that R3/wt has a much stronger aggregation propensity than either R2/wt or R2/ΔK280. Heterodimers containing R3/wt are less stable than R3/wt homodimers but much more stable than homodimers of R2/wt and R2/ΔK280, suggesting a possible role of PHF6*–PHF6 interactions in initiating the aggregation of full-length Tau. Lastly, R2/ΔK280 binds more strongly to R3/wt than R2/wt, suggesting a possible mechanism for a pathological loss of normal Tau function. |
doi_str_mv | 10.1021/acs.jpcb.5b00175 |
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Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, using experiments and computational modeling, we study the self-assembly of individual and binary mixtures of Tau fragments containing PHF6* (R2/wt; 273GKVQIINKKLDL284) and PHF6 (R3/wt; 306 VQIVYKPVDLSK317) and a mutant R2/ΔK280 associated with a neurodegenerative tauopathy. The initial stage of aggregation is probed by ion-mobility mass spectrometry, the kinetics of aggregation monitored with Thioflavin T assays, and the morphology of aggregates visualized by transmission electron microscopy. Insights into the structure of early aggregates and the factors stabilizing the aggregates are obtained from replica exchange molecular dynamics simulations. Our data suggest that R3/wt has a much stronger aggregation propensity than either R2/wt or R2/ΔK280. Heterodimers containing R3/wt are less stable than R3/wt homodimers but much more stable than homodimers of R2/wt and R2/ΔK280, suggesting a possible role of PHF6*–PHF6 interactions in initiating the aggregation of full-length Tau. Lastly, R2/ΔK280 binds more strongly to R3/wt than R2/wt, suggesting a possible mechanism for a pathological loss of normal Tau function.</description><identifier>ISSN: 1520-6106</identifier><identifier>ISSN: 1520-5207</identifier><identifier>EISSN: 1520-5207</identifier><identifier>DOI: 10.1021/acs.jpcb.5b00175</identifier><identifier>PMID: 25775228</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Agglomeration ; Aggregates ; Benzothiazoles ; Dimerization ; Diseases ; Fragments ; Humans ; Ion exchangers ; Mass Spectrometry ; Mathematical models ; Microscopy, Electron, Transmission ; microtubules ; Molecular dynamics ; Molecular Dynamics Simulation ; mutants ; Mutation ; Protein Binding ; Self assembly ; tau Proteins - chemistry ; tau Proteins - genetics ; Thiazoles - chemistry ; transmission electron microscopy</subject><ispartof>The journal of physical chemistry. 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B</title><addtitle>J. Phys. Chem. B</addtitle><description>Self-aggregation of the microtubule-binding protein Tau reduces its functionality and is tightly associated with Tau-related diseases, termed tauopathies. Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, using experiments and computational modeling, we study the self-assembly of individual and binary mixtures of Tau fragments containing PHF6* (R2/wt; 273GKVQIINKKLDL284) and PHF6 (R3/wt; 306 VQIVYKPVDLSK317) and a mutant R2/ΔK280 associated with a neurodegenerative tauopathy. The initial stage of aggregation is probed by ion-mobility mass spectrometry, the kinetics of aggregation monitored with Thioflavin T assays, and the morphology of aggregates visualized by transmission electron microscopy. Insights into the structure of early aggregates and the factors stabilizing the aggregates are obtained from replica exchange molecular dynamics simulations. Our data suggest that R3/wt has a much stronger aggregation propensity than either R2/wt or R2/ΔK280. Heterodimers containing R3/wt are less stable than R3/wt homodimers but much more stable than homodimers of R2/wt and R2/ΔK280, suggesting a possible role of PHF6*–PHF6 interactions in initiating the aggregation of full-length Tau. Lastly, R2/ΔK280 binds more strongly to R3/wt than R2/wt, suggesting a possible mechanism for a pathological loss of normal Tau function.</description><subject>Agglomeration</subject><subject>Aggregates</subject><subject>Benzothiazoles</subject><subject>Dimerization</subject><subject>Diseases</subject><subject>Fragments</subject><subject>Humans</subject><subject>Ion exchangers</subject><subject>Mass Spectrometry</subject><subject>Mathematical models</subject><subject>Microscopy, Electron, Transmission</subject><subject>microtubules</subject><subject>Molecular dynamics</subject><subject>Molecular Dynamics Simulation</subject><subject>mutants</subject><subject>Mutation</subject><subject>Protein Binding</subject><subject>Self assembly</subject><subject>tau Proteins - chemistry</subject><subject>tau Proteins - genetics</subject><subject>Thiazoles - chemistry</subject><subject>transmission electron microscopy</subject><issn>1520-6106</issn><issn>1520-5207</issn><issn>1520-5207</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1PGzEQxS1UBJT23lPlI5WaMHY89rqHSkDLh6CCooDak-XddYLRrh3Wu5X47-s0KaKHioM1lub3nmbmEfKOwZgBZ_u2SuP7RVWOsQRgCjfIDkMOo_zUq_VfMpDb5HVK9wAceSG3yDZHpZDzYof8mNqBHqTk2rJ5_ESnd45-ia0PNvT0OjaOxhm9Oj2WdO_2-9ntz_MP1Af6zVdd7IdyyP1DH2of5vTazX0MuSyczdLJG7I5s01yb9d1l9wcf50enY4uLk_Ojg4uRhYl9iNXMod1AbrUVmtEZqXSCnXBNWNW6doWzGkuZwI1d0KxGupSVFArtVwBJ7vk88p3MZStqysX-s42ZtH51naPJlpv_u0Ef2fm8ZcRghcoJtlgb23QxYfBpd60PlWuaWxwcUiGAwACCCVeRJmSHCRHAS-jUupiohSTGYUVmo-aUudmT8MzMMuYTY7ZLGM265iz5P3zpZ8Ef3PNwMcV8Ecahy7kDP7v9xuQTrBG</recordid><startdate>20150402</startdate><enddate>20150402</enddate><creator>Ganguly, Pritam</creator><creator>Do, Thanh D</creator><creator>Larini, Luca</creator><creator>LaPointe, Nichole E</creator><creator>Sercel, Alexander J</creator><creator>Shade, Madeleine F</creator><creator>Feinstein, Stuart C</creator><creator>Bowers, Michael T</creator><creator>Shea, Joan-Emma</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20150402</creationdate><title>Tau Assembly: The Dominant Role of PHF6 (VQIVYK) in Microtubule Binding Region Repeat R3</title><author>Ganguly, Pritam ; Do, Thanh D ; Larini, Luca ; LaPointe, Nichole E ; Sercel, Alexander J ; Shade, Madeleine F ; Feinstein, Stuart C ; Bowers, Michael T ; Shea, Joan-Emma</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a565t-eb1e5d809b9a99551a67975982911a79da81e926f4592e471d0db4c0d77775253</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Agglomeration</topic><topic>Aggregates</topic><topic>Benzothiazoles</topic><topic>Dimerization</topic><topic>Diseases</topic><topic>Fragments</topic><topic>Humans</topic><topic>Ion exchangers</topic><topic>Mass Spectrometry</topic><topic>Mathematical models</topic><topic>Microscopy, Electron, Transmission</topic><topic>microtubules</topic><topic>Molecular dynamics</topic><topic>Molecular Dynamics Simulation</topic><topic>mutants</topic><topic>Mutation</topic><topic>Protein Binding</topic><topic>Self assembly</topic><topic>tau Proteins - chemistry</topic><topic>tau Proteins - genetics</topic><topic>Thiazoles - chemistry</topic><topic>transmission electron microscopy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ganguly, Pritam</creatorcontrib><creatorcontrib>Do, Thanh D</creatorcontrib><creatorcontrib>Larini, Luca</creatorcontrib><creatorcontrib>LaPointe, Nichole E</creatorcontrib><creatorcontrib>Sercel, Alexander J</creatorcontrib><creatorcontrib>Shade, Madeleine F</creatorcontrib><creatorcontrib>Feinstein, Stuart C</creatorcontrib><creatorcontrib>Bowers, Michael T</creatorcontrib><creatorcontrib>Shea, Joan-Emma</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The journal of physical chemistry. B</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ganguly, Pritam</au><au>Do, Thanh D</au><au>Larini, Luca</au><au>LaPointe, Nichole E</au><au>Sercel, Alexander J</au><au>Shade, Madeleine F</au><au>Feinstein, Stuart C</au><au>Bowers, Michael T</au><au>Shea, Joan-Emma</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tau Assembly: The Dominant Role of PHF6 (VQIVYK) in Microtubule Binding Region Repeat R3</atitle><jtitle>The journal of physical chemistry. B</jtitle><addtitle>J. Phys. Chem. B</addtitle><date>2015-04-02</date><risdate>2015</risdate><volume>119</volume><issue>13</issue><spage>4582</spage><epage>4593</epage><pages>4582-4593</pages><issn>1520-6106</issn><issn>1520-5207</issn><eissn>1520-5207</eissn><abstract>Self-aggregation of the microtubule-binding protein Tau reduces its functionality and is tightly associated with Tau-related diseases, termed tauopathies. Tau aggregation is also strongly associated with two nucleating six-residue segments, namely PHF6 (VQIVYK) and PHF6* (VQIINK). In this paper, using experiments and computational modeling, we study the self-assembly of individual and binary mixtures of Tau fragments containing PHF6* (R2/wt; 273GKVQIINKKLDL284) and PHF6 (R3/wt; 306 VQIVYKPVDLSK317) and a mutant R2/ΔK280 associated with a neurodegenerative tauopathy. The initial stage of aggregation is probed by ion-mobility mass spectrometry, the kinetics of aggregation monitored with Thioflavin T assays, and the morphology of aggregates visualized by transmission electron microscopy. Insights into the structure of early aggregates and the factors stabilizing the aggregates are obtained from replica exchange molecular dynamics simulations. Our data suggest that R3/wt has a much stronger aggregation propensity than either R2/wt or R2/ΔK280. Heterodimers containing R3/wt are less stable than R3/wt homodimers but much more stable than homodimers of R2/wt and R2/ΔK280, suggesting a possible role of PHF6*–PHF6 interactions in initiating the aggregation of full-length Tau. Lastly, R2/ΔK280 binds more strongly to R3/wt than R2/wt, suggesting a possible mechanism for a pathological loss of normal Tau function.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>25775228</pmid><doi>10.1021/acs.jpcb.5b00175</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Agglomeration Aggregates Benzothiazoles Dimerization Diseases Fragments Humans Ion exchangers Mass Spectrometry Mathematical models Microscopy, Electron, Transmission microtubules Molecular dynamics Molecular Dynamics Simulation mutants Mutation Protein Binding Self assembly tau Proteins - chemistry tau Proteins - genetics Thiazoles - chemistry transmission electron microscopy |
title | Tau Assembly: The Dominant Role of PHF6 (VQIVYK) in Microtubule Binding Region Repeat R3 |
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