Pediatric Drug Safety Signal Detection: A New Drug–Event Reference Set for Performance Testing of Data-Mining Methods and Systems
Background Better evidence regarding drug safety in the pediatric population might be generated from existing data sources such as spontaneous reporting systems and electronic healthcare records. The Global Research in Paediatrics (GRiP)–Network of Excellence aims to develop pediatric-specific metho...
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creator | Osokogu, Osemeke U. Fregonese, Federica Ferrajolo, Carmen Verhamme, Katia de Bie, Sandra Jong, Geert ’t Catapano, Mariana Weibel, Daniel Kaguelidou, Florentia Bramer, Wichor M. Hsia, Yingfen Wong, Ian C. K. Gazarian, Madlen Bonhoeffer, Jan Sturkenboom, Miriam |
description | Background
Better evidence regarding drug safety in the pediatric population might be generated from existing data sources such as spontaneous reporting systems and electronic healthcare records. The Global Research in Paediatrics (GRiP)–Network of Excellence aims to develop pediatric-specific methods that can be applied to these data sources. A reference set of positive and negative drug–event associations is required.
Objective
The aim of this study was to develop a pediatric-specific reference set of positive and negative drug–event associations.
Methods
Considering user patterns and expert opinion, 16 drugs that are used in individuals aged 0–18 years were selected and evaluated against 16 events, regarded as important safety outcomes. A cross-table of unique drug–event pairs was created. Each pair was classified as potential positive or negative control based on information from the drug’s Summary of Product Characteristics and Micromedex. If both information sources consistently listed the event as an adverse event, the combination was reviewed as potential positive control. If both did not, the combination was evaluated as potential negative control. Further evaluation was based on published literature.
Results
Selected drugs include ibuprofen, flucloxacillin, domperidone, methylphenidate, montelukast, quinine, and cyproterone/ethinylestradiol. Selected events include bullous eruption, aplastic anemia, ventricular arrhythmia, sudden death, acute kidney injury, psychosis, and seizure. Altogether, 256 unique combinations were reviewed, yielding 37 positive (17 with evidence from the pediatric population and 20 with evidence from adults only) and 90 negative control pairs, with the remainder being unclassifiable.
Conclusion
We propose a drug–event reference set that can be used to compare different signal detection methods in the pediatric population. |
doi_str_mv | 10.1007/s40264-015-0265-0 |
format | Article |
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Better evidence regarding drug safety in the pediatric population might be generated from existing data sources such as spontaneous reporting systems and electronic healthcare records. The Global Research in Paediatrics (GRiP)–Network of Excellence aims to develop pediatric-specific methods that can be applied to these data sources. A reference set of positive and negative drug–event associations is required.
Objective
The aim of this study was to develop a pediatric-specific reference set of positive and negative drug–event associations.
Methods
Considering user patterns and expert opinion, 16 drugs that are used in individuals aged 0–18 years were selected and evaluated against 16 events, regarded as important safety outcomes. A cross-table of unique drug–event pairs was created. Each pair was classified as potential positive or negative control based on information from the drug’s Summary of Product Characteristics and Micromedex. If both information sources consistently listed the event as an adverse event, the combination was reviewed as potential positive control. If both did not, the combination was evaluated as potential negative control. Further evaluation was based on published literature.
Results
Selected drugs include ibuprofen, flucloxacillin, domperidone, methylphenidate, montelukast, quinine, and cyproterone/ethinylestradiol. Selected events include bullous eruption, aplastic anemia, ventricular arrhythmia, sudden death, acute kidney injury, psychosis, and seizure. Altogether, 256 unique combinations were reviewed, yielding 37 positive (17 with evidence from the pediatric population and 20 with evidence from adults only) and 90 negative control pairs, with the remainder being unclassifiable.
Conclusion
We propose a drug–event reference set that can be used to compare different signal detection methods in the pediatric population.</description><identifier>ISSN: 0114-5916</identifier><identifier>EISSN: 1179-1942</identifier><identifier>DOI: 10.1007/s40264-015-0265-0</identifier><identifier>PMID: 25663078</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Adolescent ; Adverse Drug Reaction Reporting Systems - organization & administration ; Adverse Drug Reaction Reporting Systems - statistics & numerical data ; Age ; Child ; Child, Preschool ; Classification ; Codes ; Data Mining - methods ; Databases, Factual - statistics & numerical data ; Drug Safety and Pharmacovigilance ; Drug-Related Side Effects and Adverse Reactions - epidemiology ; Drug-Related Side Effects and Adverse Reactions - etiology ; Drugs ; Electronic Health Records - statistics & numerical data ; Humans ; Infant ; International organizations ; Medicine ; Medicine & Public Health ; Methods ; Original ; Original Research Article ; Pediatrics ; Pediatrics - standards ; Pharmaceutical industry ; Pharmacology/Toxicology ; Population ; Product safety ; Studies</subject><ispartof>Drug safety, 2015-02, Vol.38 (2), p.207-217</ispartof><rights>The Author(s) 2015</rights><rights>Copyright Springer Science & Business Media Feb 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c503t-ae764d76d951d617787e871c6f32d550a03c81cc46bf6a21b59c7b056a52da2d3</citedby><cites>FETCH-LOGICAL-c503t-ae764d76d951d617787e871c6f32d550a03c81cc46bf6a21b59c7b056a52da2d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s40264-015-0265-0$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s40264-015-0265-0$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,27902,27903,41466,42535,51296</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25663078$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Osokogu, Osemeke U.</creatorcontrib><creatorcontrib>Fregonese, Federica</creatorcontrib><creatorcontrib>Ferrajolo, Carmen</creatorcontrib><creatorcontrib>Verhamme, Katia</creatorcontrib><creatorcontrib>de Bie, Sandra</creatorcontrib><creatorcontrib>Jong, Geert ’t</creatorcontrib><creatorcontrib>Catapano, Mariana</creatorcontrib><creatorcontrib>Weibel, Daniel</creatorcontrib><creatorcontrib>Kaguelidou, Florentia</creatorcontrib><creatorcontrib>Bramer, Wichor M.</creatorcontrib><creatorcontrib>Hsia, Yingfen</creatorcontrib><creatorcontrib>Wong, Ian C. K.</creatorcontrib><creatorcontrib>Gazarian, Madlen</creatorcontrib><creatorcontrib>Bonhoeffer, Jan</creatorcontrib><creatorcontrib>Sturkenboom, Miriam</creatorcontrib><title>Pediatric Drug Safety Signal Detection: A New Drug–Event Reference Set for Performance Testing of Data-Mining Methods and Systems</title><title>Drug safety</title><addtitle>Drug Saf</addtitle><addtitle>Drug Saf</addtitle><description>Background
Better evidence regarding drug safety in the pediatric population might be generated from existing data sources such as spontaneous reporting systems and electronic healthcare records. The Global Research in Paediatrics (GRiP)–Network of Excellence aims to develop pediatric-specific methods that can be applied to these data sources. A reference set of positive and negative drug–event associations is required.
Objective
The aim of this study was to develop a pediatric-specific reference set of positive and negative drug–event associations.
Methods
Considering user patterns and expert opinion, 16 drugs that are used in individuals aged 0–18 years were selected and evaluated against 16 events, regarded as important safety outcomes. A cross-table of unique drug–event pairs was created. Each pair was classified as potential positive or negative control based on information from the drug’s Summary of Product Characteristics and Micromedex. If both information sources consistently listed the event as an adverse event, the combination was reviewed as potential positive control. If both did not, the combination was evaluated as potential negative control. Further evaluation was based on published literature.
Results
Selected drugs include ibuprofen, flucloxacillin, domperidone, methylphenidate, montelukast, quinine, and cyproterone/ethinylestradiol. Selected events include bullous eruption, aplastic anemia, ventricular arrhythmia, sudden death, acute kidney injury, psychosis, and seizure. Altogether, 256 unique combinations were reviewed, yielding 37 positive (17 with evidence from the pediatric population and 20 with evidence from adults only) and 90 negative control pairs, with the remainder being unclassifiable.
Conclusion
We propose a drug–event reference set that can be used to compare different signal detection methods in the pediatric population.</description><subject>Adolescent</subject><subject>Adverse Drug Reaction Reporting Systems - organization & administration</subject><subject>Adverse Drug Reaction Reporting Systems - statistics & numerical data</subject><subject>Age</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Classification</subject><subject>Codes</subject><subject>Data Mining - methods</subject><subject>Databases, Factual - statistics & numerical data</subject><subject>Drug Safety and Pharmacovigilance</subject><subject>Drug-Related Side Effects and Adverse Reactions - epidemiology</subject><subject>Drug-Related Side Effects and Adverse Reactions - etiology</subject><subject>Drugs</subject><subject>Electronic Health Records - statistics & numerical data</subject><subject>Humans</subject><subject>Infant</subject><subject>International organizations</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Methods</subject><subject>Original</subject><subject>Original Research Article</subject><subject>Pediatrics</subject><subject>Pediatrics - standards</subject><subject>Pharmaceutical industry</subject><subject>Pharmacology/Toxicology</subject><subject>Population</subject><subject>Product safety</subject><subject>Studies</subject><issn>0114-5916</issn><issn>1179-1942</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp1kc1u1DAQxy0EokvhAbggS1y4BGzHHwkHpKpbPqQWKracLa89SV0lTmt7i_aGxCPwhjwJDluqgsTF4_H85m-P_wg9peQlJUS9SpwwyStCRVU2ZbmHFpSqtqItZ_fRglDKK9FSuYcepXRBCGmYbB6iPSakrIlqFuj7KThvcvQWL-OmxyvTQd7ile-DGfASMtjsp_AaH-CP8PU38_Pbj6NrCBl_hg4iBAt4BRl3U8SnEEsYzXx2Bin70OOpw0uTTXXiw5yeQD6fXMImOLzapgxjeowedGZI8OQm7qMvb4_ODt9Xx5_efTg8OK6sIHWuDCjJnZKuFdRJqlSjoFHUyq5mTghiSG0bai2X604aRteitWpNhDSCOcNcvY_e7HQvN-sRnC0zRDPoy-hHE7d6Ml7_XQn-XPfTteY1ayjjReDFjUCcrjZlPj36ZGEYTIBpkzSVStZccdYW9Pk_6MW0ieVPZ0oKSmXxolB0R9k4pRShu30MJXq2WO8s1sViPVusSel5dneK244_nhaA7YBUSqGHeOfq_6r-Anhfst4</recordid><startdate>20150201</startdate><enddate>20150201</enddate><creator>Osokogu, Osemeke U.</creator><creator>Fregonese, Federica</creator><creator>Ferrajolo, Carmen</creator><creator>Verhamme, Katia</creator><creator>de Bie, Sandra</creator><creator>Jong, Geert ’t</creator><creator>Catapano, Mariana</creator><creator>Weibel, Daniel</creator><creator>Kaguelidou, Florentia</creator><creator>Bramer, Wichor M.</creator><creator>Hsia, Yingfen</creator><creator>Wong, Ian C. K.</creator><creator>Gazarian, Madlen</creator><creator>Bonhoeffer, Jan</creator><creator>Sturkenboom, Miriam</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>4T-</scope><scope>7RV</scope><scope>7T2</scope><scope>7TK</scope><scope>7U7</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>KB0</scope><scope>M0S</scope><scope>M1P</scope><scope>NAPCQ</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7U2</scope><scope>5PM</scope></search><sort><creationdate>20150201</creationdate><title>Pediatric Drug Safety Signal Detection: A New Drug–Event Reference Set for Performance Testing of Data-Mining Methods and Systems</title><author>Osokogu, Osemeke U. ; Fregonese, Federica ; Ferrajolo, Carmen ; Verhamme, Katia ; de Bie, Sandra ; Jong, Geert ’t ; Catapano, Mariana ; Weibel, Daniel ; Kaguelidou, Florentia ; Bramer, Wichor M. ; Hsia, Yingfen ; Wong, Ian C. K. ; Gazarian, Madlen ; Bonhoeffer, Jan ; Sturkenboom, Miriam</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c503t-ae764d76d951d617787e871c6f32d550a03c81cc46bf6a21b59c7b056a52da2d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adolescent</topic><topic>Adverse Drug Reaction Reporting Systems - organization & administration</topic><topic>Adverse Drug Reaction Reporting Systems - statistics & numerical data</topic><topic>Age</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Classification</topic><topic>Codes</topic><topic>Data Mining - methods</topic><topic>Databases, Factual - statistics & numerical data</topic><topic>Drug Safety and Pharmacovigilance</topic><topic>Drug-Related Side Effects and Adverse Reactions - epidemiology</topic><topic>Drug-Related Side Effects and Adverse Reactions - etiology</topic><topic>Drugs</topic><topic>Electronic Health Records - statistics & numerical data</topic><topic>Humans</topic><topic>Infant</topic><topic>International organizations</topic><topic>Medicine</topic><topic>Medicine & Public Health</topic><topic>Methods</topic><topic>Original</topic><topic>Original Research Article</topic><topic>Pediatrics</topic><topic>Pediatrics - standards</topic><topic>Pharmaceutical industry</topic><topic>Pharmacology/Toxicology</topic><topic>Population</topic><topic>Product safety</topic><topic>Studies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Osokogu, Osemeke U.</creatorcontrib><creatorcontrib>Fregonese, Federica</creatorcontrib><creatorcontrib>Ferrajolo, Carmen</creatorcontrib><creatorcontrib>Verhamme, Katia</creatorcontrib><creatorcontrib>de Bie, Sandra</creatorcontrib><creatorcontrib>Jong, Geert ’t</creatorcontrib><creatorcontrib>Catapano, Mariana</creatorcontrib><creatorcontrib>Weibel, Daniel</creatorcontrib><creatorcontrib>Kaguelidou, Florentia</creatorcontrib><creatorcontrib>Bramer, Wichor M.</creatorcontrib><creatorcontrib>Hsia, Yingfen</creatorcontrib><creatorcontrib>Wong, Ian C. K.</creatorcontrib><creatorcontrib>Gazarian, Madlen</creatorcontrib><creatorcontrib>Bonhoeffer, Jan</creatorcontrib><creatorcontrib>Sturkenboom, Miriam</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Docstoc</collection><collection>Nursing & Allied Health Database</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Nursing & Allied Health Premium</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Safety Science and Risk</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Drug safety</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Osokogu, Osemeke U.</au><au>Fregonese, Federica</au><au>Ferrajolo, Carmen</au><au>Verhamme, Katia</au><au>de Bie, Sandra</au><au>Jong, Geert ’t</au><au>Catapano, Mariana</au><au>Weibel, Daniel</au><au>Kaguelidou, Florentia</au><au>Bramer, Wichor M.</au><au>Hsia, Yingfen</au><au>Wong, Ian C. K.</au><au>Gazarian, Madlen</au><au>Bonhoeffer, Jan</au><au>Sturkenboom, Miriam</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pediatric Drug Safety Signal Detection: A New Drug–Event Reference Set for Performance Testing of Data-Mining Methods and Systems</atitle><jtitle>Drug safety</jtitle><stitle>Drug Saf</stitle><addtitle>Drug Saf</addtitle><date>2015-02-01</date><risdate>2015</risdate><volume>38</volume><issue>2</issue><spage>207</spage><epage>217</epage><pages>207-217</pages><issn>0114-5916</issn><eissn>1179-1942</eissn><abstract>Background
Better evidence regarding drug safety in the pediatric population might be generated from existing data sources such as spontaneous reporting systems and electronic healthcare records. The Global Research in Paediatrics (GRiP)–Network of Excellence aims to develop pediatric-specific methods that can be applied to these data sources. A reference set of positive and negative drug–event associations is required.
Objective
The aim of this study was to develop a pediatric-specific reference set of positive and negative drug–event associations.
Methods
Considering user patterns and expert opinion, 16 drugs that are used in individuals aged 0–18 years were selected and evaluated against 16 events, regarded as important safety outcomes. A cross-table of unique drug–event pairs was created. Each pair was classified as potential positive or negative control based on information from the drug’s Summary of Product Characteristics and Micromedex. If both information sources consistently listed the event as an adverse event, the combination was reviewed as potential positive control. If both did not, the combination was evaluated as potential negative control. Further evaluation was based on published literature.
Results
Selected drugs include ibuprofen, flucloxacillin, domperidone, methylphenidate, montelukast, quinine, and cyproterone/ethinylestradiol. Selected events include bullous eruption, aplastic anemia, ventricular arrhythmia, sudden death, acute kidney injury, psychosis, and seizure. Altogether, 256 unique combinations were reviewed, yielding 37 positive (17 with evidence from the pediatric population and 20 with evidence from adults only) and 90 negative control pairs, with the remainder being unclassifiable.
Conclusion
We propose a drug–event reference set that can be used to compare different signal detection methods in the pediatric population.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>25663078</pmid><doi>10.1007/s40264-015-0265-0</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adverse Drug Reaction Reporting Systems - organization & administration Adverse Drug Reaction Reporting Systems - statistics & numerical data Age Child Child, Preschool Classification Codes Data Mining - methods Databases, Factual - statistics & numerical data Drug Safety and Pharmacovigilance Drug-Related Side Effects and Adverse Reactions - epidemiology Drug-Related Side Effects and Adverse Reactions - etiology Drugs Electronic Health Records - statistics & numerical data Humans Infant International organizations Medicine Medicine & Public Health Methods Original Original Research Article Pediatrics Pediatrics - standards Pharmaceutical industry Pharmacology/Toxicology Population Product safety Studies |
title | Pediatric Drug Safety Signal Detection: A New Drug–Event Reference Set for Performance Testing of Data-Mining Methods and Systems |
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