Modulated expression of human peripheral blood microRNAs from infancy to adulthood and its role in aging
Summary Accumulating evidence suggests a role for microRNAs (miRNAs) in regulating various processes of mammalian postnatal development and aging. To investigate the changes in blood‐based miRNA expression from preterm infants to adulthood, we compared 365 miRNA expression profiles in a screening se...
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Veröffentlicht in: | Aging cell 2014-08, Vol.13 (4), p.679-689 |
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creator | Lai, Chi‐Yu Wu, Yen‐Tzu Yu, Sung‐Liang Yu, Ya‐Hui Lee, Su‐Yin Liu, Chih‐Min Hsieh, Wu‐Shiun Hwu, Hai‐Gwo Chen, Pau‐Chung Jeng, Suh‐Fang Chen, Wei J. |
description | Summary
Accumulating evidence suggests a role for microRNAs (miRNAs) in regulating various processes of mammalian postnatal development and aging. To investigate the changes in blood‐based miRNA expression from preterm infants to adulthood, we compared 365 miRNA expression profiles in a screening set of preterm infants and adults. Approximately one‐third of the miRNAs were constantly expressed from postnatal development to adulthood, another one‐third were differentially expressed between preterm infants and adults, and the remaining one‐third were not detectable in these two groups. Based on their expression in infants and adults, the miRNAs were categorized into five classes, and six of the seven miRNAs chosen from each class except one with age‐constant expression were confirmed in a validation set containing infants, children, and adults. Comparing the chromosomal locations of the different miRNA classes revealed two hot spots: the miRNA cluster on 14q32.31 exhibited age‐constant expression, and the one on 9q22.21 exhibited up‐regulation in adults. Furthermore, six miRNAs detectable in adults were down‐regulated in older adults, and four chosen for individual quantification were verified in the validation set. Analysis of the network functions revealed that differentially regulated miRNAs between infants and adults and miRNAs that decreased during aging shared two network functions: inflammatory disease and inflammatory response. Four expression patterns existed in the 11 miRNAs from infancy to adulthood, with a significant transition in ages 9–20 years. Our results provide an overview on the regulation pattern of blood miRNAs throughout life and the possible biological functions performed by different classes of miRNAs. |
doi_str_mv | 10.1111/acel.12225 |
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Accumulating evidence suggests a role for microRNAs (miRNAs) in regulating various processes of mammalian postnatal development and aging. To investigate the changes in blood‐based miRNA expression from preterm infants to adulthood, we compared 365 miRNA expression profiles in a screening set of preterm infants and adults. Approximately one‐third of the miRNAs were constantly expressed from postnatal development to adulthood, another one‐third were differentially expressed between preterm infants and adults, and the remaining one‐third were not detectable in these two groups. Based on their expression in infants and adults, the miRNAs were categorized into five classes, and six of the seven miRNAs chosen from each class except one with age‐constant expression were confirmed in a validation set containing infants, children, and adults. Comparing the chromosomal locations of the different miRNA classes revealed two hot spots: the miRNA cluster on 14q32.31 exhibited age‐constant expression, and the one on 9q22.21 exhibited up‐regulation in adults. Furthermore, six miRNAs detectable in adults were down‐regulated in older adults, and four chosen for individual quantification were verified in the validation set. Analysis of the network functions revealed that differentially regulated miRNAs between infants and adults and miRNAs that decreased during aging shared two network functions: inflammatory disease and inflammatory response. Four expression patterns existed in the 11 miRNAs from infancy to adulthood, with a significant transition in ages 9–20 years. Our results provide an overview on the regulation pattern of blood miRNAs throughout life and the possible biological functions performed by different classes of miRNAs.</description><identifier>ISSN: 1474-9718</identifier><identifier>EISSN: 1474-9726</identifier><identifier>DOI: 10.1111/acel.12225</identifier><identifier>PMID: 24803090</identifier><language>eng</language><publisher>England: John Wiley & Sons, Inc</publisher><subject>Adult ; aging ; Aging - blood ; Aging - genetics ; Child ; Child, Preschool ; Chromosomes, Human - genetics ; Comparative analysis ; development ; Gene Expression Profiling ; Gene Expression Regulation, Developmental ; Gene Regulatory Networks - genetics ; Humans ; Infant ; Infant, Newborn ; Infants (Premature) ; MicroRNA ; MicroRNAs - blood ; MicroRNAs - classification ; MicroRNAs - genetics ; network function ; Original ; peripheral blood</subject><ispartof>Aging cell, 2014-08, Vol.13 (4), p.679-689</ispartof><rights>2014 The Authors. published by the Anatomical Society and John Wiley & Sons Ltd.</rights><rights>2014 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd.</rights><rights>COPYRIGHT 2014 John Wiley & Sons, Inc.</rights><rights>Copyright © 2014 The Anatomical Society and John Wiley & Sons Ltd</rights><rights>2014 The Authors. published by the Anatomical Society and John Wiley & Sons Ltd. 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326935/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326935/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,725,778,782,862,883,1414,11545,27907,27908,45557,45558,46035,46459,53774,53776</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24803090$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lai, Chi‐Yu</creatorcontrib><creatorcontrib>Wu, Yen‐Tzu</creatorcontrib><creatorcontrib>Yu, Sung‐Liang</creatorcontrib><creatorcontrib>Yu, Ya‐Hui</creatorcontrib><creatorcontrib>Lee, Su‐Yin</creatorcontrib><creatorcontrib>Liu, Chih‐Min</creatorcontrib><creatorcontrib>Hsieh, Wu‐Shiun</creatorcontrib><creatorcontrib>Hwu, Hai‐Gwo</creatorcontrib><creatorcontrib>Chen, Pau‐Chung</creatorcontrib><creatorcontrib>Jeng, Suh‐Fang</creatorcontrib><creatorcontrib>Chen, Wei J.</creatorcontrib><title>Modulated expression of human peripheral blood microRNAs from infancy to adulthood and its role in aging</title><title>Aging cell</title><addtitle>Aging Cell</addtitle><description>Summary
Accumulating evidence suggests a role for microRNAs (miRNAs) in regulating various processes of mammalian postnatal development and aging. To investigate the changes in blood‐based miRNA expression from preterm infants to adulthood, we compared 365 miRNA expression profiles in a screening set of preterm infants and adults. Approximately one‐third of the miRNAs were constantly expressed from postnatal development to adulthood, another one‐third were differentially expressed between preterm infants and adults, and the remaining one‐third were not detectable in these two groups. Based on their expression in infants and adults, the miRNAs were categorized into five classes, and six of the seven miRNAs chosen from each class except one with age‐constant expression were confirmed in a validation set containing infants, children, and adults. Comparing the chromosomal locations of the different miRNA classes revealed two hot spots: the miRNA cluster on 14q32.31 exhibited age‐constant expression, and the one on 9q22.21 exhibited up‐regulation in adults. Furthermore, six miRNAs detectable in adults were down‐regulated in older adults, and four chosen for individual quantification were verified in the validation set. Analysis of the network functions revealed that differentially regulated miRNAs between infants and adults and miRNAs that decreased during aging shared two network functions: inflammatory disease and inflammatory response. Four expression patterns existed in the 11 miRNAs from infancy to adulthood, with a significant transition in ages 9–20 years. Our results provide an overview on the regulation pattern of blood miRNAs throughout life and the possible biological functions performed by different classes of miRNAs.</description><subject>Adult</subject><subject>aging</subject><subject>Aging - blood</subject><subject>Aging - genetics</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Chromosomes, Human - genetics</subject><subject>Comparative analysis</subject><subject>development</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Gene Regulatory Networks - genetics</subject><subject>Humans</subject><subject>Infant</subject><subject>Infant, Newborn</subject><subject>Infants (Premature)</subject><subject>MicroRNA</subject><subject>MicroRNAs - blood</subject><subject>MicroRNAs - classification</subject><subject>MicroRNAs - genetics</subject><subject>network function</subject><subject>Original</subject><subject>peripheral blood</subject><issn>1474-9718</issn><issn>1474-9726</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNptkk1v1DAQhiMEoqVw4QcgS1y47OLPOL4grVblQ1pAQr1b3nicuErsxU4K--9x2rJQhH3wyPPM65nxVNVLgtekrLemhWFNKKXiUXVOuOQrJWn9-GST5qx6lvM1xkQqzJ5WZ5Q3mGGFz6v-c7TzYCawCH4eEuTsY0DRoX4eTUAHSP7QQzID2g8xWjT6NsVvXzYZuRRH5IMzoT2iKSJTdKZ-YUywyE8ZpThAIZDpfOieV0-cGTK8uD8vqqv3l1fbj6vd1w-ftpvdquNMiZXCAsCCos7I1hHChN03riVc1bhpRb2vG1C1tVTUjhkJipuGcSoc5TVlll1U7-5kD_N-BNtCmEry-pD8aNJRR-P1Q0_wve7ijeaM1oqJIvDmXiDF7zPkSY8-lwYPJkCcsyaipMIEprigr_9Br-OcQqluoRopCSfyD9WZAXRpWCzvtouo3kgsZFO0Fmr9H6psC6XlMYDz5f5BwKu_Cz1V-PtrC0DugB8l8njyE6yXodHL0OjbodGb7eXu1mK_AKfZs9s</recordid><startdate>201408</startdate><enddate>201408</enddate><creator>Lai, Chi‐Yu</creator><creator>Wu, Yen‐Tzu</creator><creator>Yu, Sung‐Liang</creator><creator>Yu, Ya‐Hui</creator><creator>Lee, Su‐Yin</creator><creator>Liu, Chih‐Min</creator><creator>Hsieh, Wu‐Shiun</creator><creator>Hwu, Hai‐Gwo</creator><creator>Chen, Pau‐Chung</creator><creator>Jeng, Suh‐Fang</creator><creator>Chen, Wei J.</creator><general>John Wiley & Sons, Inc</general><general>BlackWell Publishing Ltd</general><scope>24P</scope><scope>WIN</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7QP</scope><scope>7TK</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201408</creationdate><title>Modulated expression of human peripheral blood microRNAs from infancy to adulthood and its role in aging</title><author>Lai, Chi‐Yu ; Wu, Yen‐Tzu ; Yu, Sung‐Liang ; Yu, Ya‐Hui ; Lee, Su‐Yin ; Liu, Chih‐Min ; Hsieh, Wu‐Shiun ; Hwu, Hai‐Gwo ; Chen, Pau‐Chung ; Jeng, Suh‐Fang ; Chen, Wei J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g4395-905eede92fa7cf1135db8fc149608c56b68e96dd256f3a7e94a83425f24623d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adult</topic><topic>aging</topic><topic>Aging - blood</topic><topic>Aging - genetics</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Chromosomes, Human - genetics</topic><topic>Comparative analysis</topic><topic>development</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Regulatory Networks - genetics</topic><topic>Humans</topic><topic>Infant</topic><topic>Infant, Newborn</topic><topic>Infants (Premature)</topic><topic>MicroRNA</topic><topic>MicroRNAs - blood</topic><topic>MicroRNAs - classification</topic><topic>MicroRNAs - genetics</topic><topic>network function</topic><topic>Original</topic><topic>peripheral blood</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lai, Chi‐Yu</creatorcontrib><creatorcontrib>Wu, Yen‐Tzu</creatorcontrib><creatorcontrib>Yu, Sung‐Liang</creatorcontrib><creatorcontrib>Yu, Ya‐Hui</creatorcontrib><creatorcontrib>Lee, Su‐Yin</creatorcontrib><creatorcontrib>Liu, Chih‐Min</creatorcontrib><creatorcontrib>Hsieh, Wu‐Shiun</creatorcontrib><creatorcontrib>Hwu, Hai‐Gwo</creatorcontrib><creatorcontrib>Chen, Pau‐Chung</creatorcontrib><creatorcontrib>Jeng, Suh‐Fang</creatorcontrib><creatorcontrib>Chen, Wei J.</creatorcontrib><collection>Wiley Online Library Open Access</collection><collection>Wiley Free Content</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Aging cell</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lai, Chi‐Yu</au><au>Wu, Yen‐Tzu</au><au>Yu, Sung‐Liang</au><au>Yu, Ya‐Hui</au><au>Lee, Su‐Yin</au><au>Liu, Chih‐Min</au><au>Hsieh, Wu‐Shiun</au><au>Hwu, Hai‐Gwo</au><au>Chen, Pau‐Chung</au><au>Jeng, Suh‐Fang</au><au>Chen, Wei J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modulated expression of human peripheral blood microRNAs from infancy to adulthood and its role in aging</atitle><jtitle>Aging cell</jtitle><addtitle>Aging Cell</addtitle><date>2014-08</date><risdate>2014</risdate><volume>13</volume><issue>4</issue><spage>679</spage><epage>689</epage><pages>679-689</pages><issn>1474-9718</issn><eissn>1474-9726</eissn><abstract>Summary
Accumulating evidence suggests a role for microRNAs (miRNAs) in regulating various processes of mammalian postnatal development and aging. To investigate the changes in blood‐based miRNA expression from preterm infants to adulthood, we compared 365 miRNA expression profiles in a screening set of preterm infants and adults. Approximately one‐third of the miRNAs were constantly expressed from postnatal development to adulthood, another one‐third were differentially expressed between preterm infants and adults, and the remaining one‐third were not detectable in these two groups. Based on their expression in infants and adults, the miRNAs were categorized into five classes, and six of the seven miRNAs chosen from each class except one with age‐constant expression were confirmed in a validation set containing infants, children, and adults. Comparing the chromosomal locations of the different miRNA classes revealed two hot spots: the miRNA cluster on 14q32.31 exhibited age‐constant expression, and the one on 9q22.21 exhibited up‐regulation in adults. Furthermore, six miRNAs detectable in adults were down‐regulated in older adults, and four chosen for individual quantification were verified in the validation set. Analysis of the network functions revealed that differentially regulated miRNAs between infants and adults and miRNAs that decreased during aging shared two network functions: inflammatory disease and inflammatory response. Four expression patterns existed in the 11 miRNAs from infancy to adulthood, with a significant transition in ages 9–20 years. Our results provide an overview on the regulation pattern of blood miRNAs throughout life and the possible biological functions performed by different classes of miRNAs.</abstract><cop>England</cop><pub>John Wiley & Sons, Inc</pub><pmid>24803090</pmid><doi>10.1111/acel.12225</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult aging Aging - blood Aging - genetics Child Child, Preschool Chromosomes, Human - genetics Comparative analysis development Gene Expression Profiling Gene Expression Regulation, Developmental Gene Regulatory Networks - genetics Humans Infant Infant, Newborn Infants (Premature) MicroRNA MicroRNAs - blood MicroRNAs - classification MicroRNAs - genetics network function Original peripheral blood |
title | Modulated expression of human peripheral blood microRNAs from infancy to adulthood and its role in aging |
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