Paternal RHD zygosity determination in Tunisians: evaluation of three molecular tests
The choice of a molecular test for first intention determination of paternal RHD zygosity, before entering into invasive diagnostics, is important for the management of pregnancies at risk of haemolytic disease of the foetus and newborn related to anti-RhD. RHD zygosity was evaluated in 370 RH:1 Tun...
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creator | Kacem, Narjes Jemni-Yacoub, Saloua Chiaroni, Jacques Bailly, Pascal Silvy, Monique |
description | The choice of a molecular test for first intention determination of paternal RHD zygosity, before entering into invasive diagnostics, is important for the management of pregnancies at risk of haemolytic disease of the foetus and newborn related to anti-RhD.
RHD zygosity was evaluated in 370 RH:1 Tunisian donors by polymerase chain reaction - sequence-specific polymorphism (PCR-SSP) analysis and polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) amplification of hybrid Rhesus box and by real time quantitative polymerase chain reaction (RQ-PCR) specific for RHD exon 5. To evaluate the accuracy of molecular tests in the cases of discordant results, the ten exons of RHD and Rhesus boxes were amplified by PCR and sequenced.
Molecular investigations revealed that our 370 donors comprise 193 dizygous and 145 hemizygous individuals and 32 subjects whose zygosity remains unknown. Positive predictive values were higher than 99% for all the methods, reaching 100% for RQ-PCR. Negative predictive values were 83.24%, 87.27% and 98% for PCR-SSP, PCR-RFLP and RQ-PCR respectively. This study also revealed 19 novel Rhesus box polymorphisms and three novel RHD alleles: RHD(Trp185Stop), RHD(Ala176Thr) and RHD(Ile342Ile).
RQ-PCR is the most convenient method for first intention determination of paternal RHD zygosity in Tunisians. However, taking into account positive and negative predictive values, PCR-RFLP could be an alternative despite the heterogeneity of Rhesus boxes and the complexity of RHD. |
doi_str_mv | 10.2450/2014.0308-13 |
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RHD zygosity was evaluated in 370 RH:1 Tunisian donors by polymerase chain reaction - sequence-specific polymorphism (PCR-SSP) analysis and polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) amplification of hybrid Rhesus box and by real time quantitative polymerase chain reaction (RQ-PCR) specific for RHD exon 5. To evaluate the accuracy of molecular tests in the cases of discordant results, the ten exons of RHD and Rhesus boxes were amplified by PCR and sequenced.
Molecular investigations revealed that our 370 donors comprise 193 dizygous and 145 hemizygous individuals and 32 subjects whose zygosity remains unknown. Positive predictive values were higher than 99% for all the methods, reaching 100% for RQ-PCR. Negative predictive values were 83.24%, 87.27% and 98% for PCR-SSP, PCR-RFLP and RQ-PCR respectively. This study also revealed 19 novel Rhesus box polymorphisms and three novel RHD alleles: RHD(Trp185Stop), RHD(Ala176Thr) and RHD(Ile342Ile).
RQ-PCR is the most convenient method for first intention determination of paternal RHD zygosity in Tunisians. However, taking into account positive and negative predictive values, PCR-RFLP could be an alternative despite the heterogeneity of Rhesus boxes and the complexity of RHD.</description><identifier>ISSN: 1723-2007</identifier><identifier>ISSN: 0258-0330</identifier><identifier>DOI: 10.2450/2014.0308-13</identifier><identifier>PMID: 24960665</identifier><language>eng</language><publisher>Italy: Edizioni SIMTI - SIMTI Servizi Srl</publisher><subject>Alleles ; Biochemistry, Molecular Biology ; Female ; Genotype ; Humans ; Life Sciences ; Male ; Original ; Polymerase Chain Reaction - methods ; Polymorphism, Restriction Fragment Length ; Rh-Hr Blood-Group System - genetics ; Tunisia</subject><ispartof>Blood transfusion = Trasfusione del sangue, 2015-01, Vol.13 (1), p.59-65</ispartof><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>SIMTI Servizi Srl 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><orcidid>0000-0002-3133-8990</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4317091/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4317091/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,725,778,782,883,27907,27908,53774,53776</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24960665$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://amu.hal.science/hal-01234167$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Kacem, Narjes</creatorcontrib><creatorcontrib>Jemni-Yacoub, Saloua</creatorcontrib><creatorcontrib>Chiaroni, Jacques</creatorcontrib><creatorcontrib>Bailly, Pascal</creatorcontrib><creatorcontrib>Silvy, Monique</creatorcontrib><title>Paternal RHD zygosity determination in Tunisians: evaluation of three molecular tests</title><title>Blood transfusion = Trasfusione del sangue</title><addtitle>Blood Transfus</addtitle><description>The choice of a molecular test for first intention determination of paternal RHD zygosity, before entering into invasive diagnostics, is important for the management of pregnancies at risk of haemolytic disease of the foetus and newborn related to anti-RhD.
RHD zygosity was evaluated in 370 RH:1 Tunisian donors by polymerase chain reaction - sequence-specific polymorphism (PCR-SSP) analysis and polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) amplification of hybrid Rhesus box and by real time quantitative polymerase chain reaction (RQ-PCR) specific for RHD exon 5. To evaluate the accuracy of molecular tests in the cases of discordant results, the ten exons of RHD and Rhesus boxes were amplified by PCR and sequenced.
Molecular investigations revealed that our 370 donors comprise 193 dizygous and 145 hemizygous individuals and 32 subjects whose zygosity remains unknown. Positive predictive values were higher than 99% for all the methods, reaching 100% for RQ-PCR. Negative predictive values were 83.24%, 87.27% and 98% for PCR-SSP, PCR-RFLP and RQ-PCR respectively. This study also revealed 19 novel Rhesus box polymorphisms and three novel RHD alleles: RHD(Trp185Stop), RHD(Ala176Thr) and RHD(Ile342Ile).
RQ-PCR is the most convenient method for first intention determination of paternal RHD zygosity in Tunisians. However, taking into account positive and negative predictive values, PCR-RFLP could be an alternative despite the heterogeneity of Rhesus boxes and the complexity of RHD.</description><subject>Alleles</subject><subject>Biochemistry, Molecular Biology</subject><subject>Female</subject><subject>Genotype</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Male</subject><subject>Original</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Rh-Hr Blood-Group System - genetics</subject><subject>Tunisia</subject><issn>1723-2007</issn><issn>0258-0330</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkM9LwzAcxXNQ3JzePEuuHjqTfNO08SAMf00YKLKdS9qka6RNR5MO5l9vx1TU04P3Pt_3hYfQBSVTxmNyzQjlUwIkjSgcoTFNGESMkGSETr1_J0SAkOkJGjEuBREiHqPVqwqmc6rGb_N7_LFbt96GHdZmcBvrVLCtw9bhZe-st8r5G2y2qu4PQVviUHXG4KatTdHXqsPB-ODP0HGpam_Ov3SCVo8Py7t5tHh5er6bLaIKIA2RiikB0LHJGdNFTrlSoCEtOS2TXCeDUM1jKqTSUhKZyEKakg0Ai0GkwGGCbg-9mz5vjC6MC52qs01nG9XtslbZ7G_ibJWt223GgSZE0qHg6lBQ_TubzxbZ3iOUAaci2e7Zy9_PfvDvMeETypt0-w</recordid><startdate>201501</startdate><enddate>201501</enddate><creator>Kacem, Narjes</creator><creator>Jemni-Yacoub, Saloua</creator><creator>Chiaroni, Jacques</creator><creator>Bailly, Pascal</creator><creator>Silvy, Monique</creator><general>Edizioni SIMTI - SIMTI Servizi Srl</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3133-8990</orcidid></search><sort><creationdate>201501</creationdate><title>Paternal RHD zygosity determination in Tunisians: evaluation of three molecular tests</title><author>Kacem, Narjes ; Jemni-Yacoub, Saloua ; Chiaroni, Jacques ; Bailly, Pascal ; Silvy, Monique</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-h338t-a51033d5eb22dcb14aa3d38f41f7bd741f1d45169ad990979c9ef238f25368343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Alleles</topic><topic>Biochemistry, Molecular Biology</topic><topic>Female</topic><topic>Genotype</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>Male</topic><topic>Original</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Rh-Hr Blood-Group System - genetics</topic><topic>Tunisia</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kacem, Narjes</creatorcontrib><creatorcontrib>Jemni-Yacoub, Saloua</creatorcontrib><creatorcontrib>Chiaroni, Jacques</creatorcontrib><creatorcontrib>Bailly, Pascal</creatorcontrib><creatorcontrib>Silvy, Monique</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Blood transfusion = Trasfusione del sangue</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kacem, Narjes</au><au>Jemni-Yacoub, Saloua</au><au>Chiaroni, Jacques</au><au>Bailly, Pascal</au><au>Silvy, Monique</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Paternal RHD zygosity determination in Tunisians: evaluation of three molecular tests</atitle><jtitle>Blood transfusion = Trasfusione del sangue</jtitle><addtitle>Blood Transfus</addtitle><date>2015-01</date><risdate>2015</risdate><volume>13</volume><issue>1</issue><spage>59</spage><epage>65</epage><pages>59-65</pages><issn>1723-2007</issn><issn>0258-0330</issn><abstract>The choice of a molecular test for first intention determination of paternal RHD zygosity, before entering into invasive diagnostics, is important for the management of pregnancies at risk of haemolytic disease of the foetus and newborn related to anti-RhD.
RHD zygosity was evaluated in 370 RH:1 Tunisian donors by polymerase chain reaction - sequence-specific polymorphism (PCR-SSP) analysis and polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) amplification of hybrid Rhesus box and by real time quantitative polymerase chain reaction (RQ-PCR) specific for RHD exon 5. To evaluate the accuracy of molecular tests in the cases of discordant results, the ten exons of RHD and Rhesus boxes were amplified by PCR and sequenced.
Molecular investigations revealed that our 370 donors comprise 193 dizygous and 145 hemizygous individuals and 32 subjects whose zygosity remains unknown. Positive predictive values were higher than 99% for all the methods, reaching 100% for RQ-PCR. Negative predictive values were 83.24%, 87.27% and 98% for PCR-SSP, PCR-RFLP and RQ-PCR respectively. This study also revealed 19 novel Rhesus box polymorphisms and three novel RHD alleles: RHD(Trp185Stop), RHD(Ala176Thr) and RHD(Ile342Ile).
RQ-PCR is the most convenient method for first intention determination of paternal RHD zygosity in Tunisians. However, taking into account positive and negative predictive values, PCR-RFLP could be an alternative despite the heterogeneity of Rhesus boxes and the complexity of RHD.</abstract><cop>Italy</cop><pub>Edizioni SIMTI - SIMTI Servizi Srl</pub><pmid>24960665</pmid><doi>10.2450/2014.0308-13</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-3133-8990</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Biochemistry, Molecular Biology Female Genotype Humans Life Sciences Male Original Polymerase Chain Reaction - methods Polymorphism, Restriction Fragment Length Rh-Hr Blood-Group System - genetics Tunisia |
title | Paternal RHD zygosity determination in Tunisians: evaluation of three molecular tests |
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