A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis
Engineering of plants with a composition of lignocellulosic biomass that is more suitable for downstream processing is of high interest for next-generation biofuel production. Lignocellulosic biomass contains a high proportion of pentose residues, which are more difficult to convert into fuels than...
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description | Engineering of plants with a composition of lignocellulosic biomass that is more suitable for downstream processing is of high interest for next-generation biofuel production. Lignocellulosic biomass contains a high proportion of pentose residues, which are more difficult to convert into fuels than hexoses. Therefore, increasing the hexose/pentose ratio in biomass is one approach for biomass improvement. A genetic engineering approach was used to investigate whether the amount of pectic galactan can be specifically increased in cell walls of Arabidopsis fiber cells, which in turn could provide a potential source of readily fermentable galactose.
First it was tested if overexpression of various plant UDP-glucose 4-epimerases (UGEs) could increase the availability of UDP-galactose and thereby increase the biosynthesis of galactan. Constitutive and tissue-specific expression of a poplar UGE and three Arabidopsis UGEs in Arabidopsis plants could not significantly increase the amount of cell wall bound galactose. We then investigated co-overexpression of AtUGE2 together with the β-1,4-galactan synthase GalS1. Co-overexpression of AtUGE2 and GalS1 led to over 80% increase in cell wall galactose levels in Arabidopsis stems, providing evidence that these proteins work synergistically. Furthermore, AtUGE2 and GalS1 overexpression in combination with overexpression of the NST1 master regulator for secondary cell wall biosynthesis resulted in increased thickness of fiber cell walls in addition to the high cell wall galactose levels. Immunofluorescence microscopy confirmed that the increased galactose was present as β-1,4-galactan in secondary cell walls.
This approach clearly indicates that simultaneous overexpression of AtUGE2 and GalS1 increases the cell wall galactose to much higher levels than can be achieved by overexpressing either one of these proteins alone. Moreover, the increased galactan content in fiber cells while improving the biomass composition had no impact on plant growth and development and hence on the overall biomass amount. Thus, we could show that the gene stacking approach described here is a promising method to engineer advanced feedstocks for biofuel production. |
doi_str_mv | 10.1186/s12870-014-0344-x |
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First it was tested if overexpression of various plant UDP-glucose 4-epimerases (UGEs) could increase the availability of UDP-galactose and thereby increase the biosynthesis of galactan. Constitutive and tissue-specific expression of a poplar UGE and three Arabidopsis UGEs in Arabidopsis plants could not significantly increase the amount of cell wall bound galactose. We then investigated co-overexpression of AtUGE2 together with the β-1,4-galactan synthase GalS1. Co-overexpression of AtUGE2 and GalS1 led to over 80% increase in cell wall galactose levels in Arabidopsis stems, providing evidence that these proteins work synergistically. Furthermore, AtUGE2 and GalS1 overexpression in combination with overexpression of the NST1 master regulator for secondary cell wall biosynthesis resulted in increased thickness of fiber cell walls in addition to the high cell wall galactose levels. Immunofluorescence microscopy confirmed that the increased galactose was present as β-1,4-galactan in secondary cell walls.
This approach clearly indicates that simultaneous overexpression of AtUGE2 and GalS1 increases the cell wall galactose to much higher levels than can be achieved by overexpressing either one of these proteins alone. Moreover, the increased galactan content in fiber cells while improving the biomass composition had no impact on plant growth and development and hence on the overall biomass amount. Thus, we could show that the gene stacking approach described here is a promising method to engineer advanced feedstocks for biofuel production.</description><identifier>ISSN: 1471-2229</identifier><identifier>EISSN: 1471-2229</identifier><identifier>DOI: 10.1186/s12870-014-0344-x</identifier><identifier>PMID: 25492673</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>09 BIOMASS FUELS ; 60 APPLIED LIFE SCIENCES ; Analysis ; Arabidopsis ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; artificial positive feedback loop ; Biodiesel fuels ; biofuels ; Biofuels - analysis ; biomass ; Biosynthesis ; Breeding ; Cell Wall - metabolism ; cell walls ; Colleges & universities ; engineering ; Enzymes ; feedstocks ; fiber cells ; fluorescence microscopy ; fuel production ; Galactan ; Galactans - metabolism ; galactose ; Galactose - metabolism ; GalS1 ; Gene Expression Regulation, Plant ; gene stacking ; genes ; Genetic aspects ; Genetic engineering ; Genetically modified organisms ; Glucose ; growth and development ; hexoses ; Laboratories ; Lignin ; Lignocellulose ; NST1 ; Pectin ; pentoses ; Phylogenetics ; Physiological aspects ; plant cell wall ; plant growth ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plants, Genetically Modified - genetics ; Plants, Genetically Modified - metabolism ; Populus ; Populus - genetics ; Populus - metabolism ; Promoter Regions, Genetic ; proteins ; Scholarships & fellowships ; stems ; UDP-glucose 4-epimerase ; UDPglucose 4-Epimerase - genetics ; UDPglucose 4-Epimerase - metabolism</subject><ispartof>BMC plant biology, 2014-12, Vol.14 (1), p.344-344, Article 344</ispartof><rights>COPYRIGHT 2014 BioMed Central Ltd.</rights><rights>2014 Gondolf et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.</rights><rights>Gondolf et al.; licensee BioMed Central Ltd. 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c621t-12d1a1df23ebb2bf310cf8b5fe54500de9a8f117fc83d300024b539ccb163f903</citedby><cites>FETCH-LOGICAL-c621t-12d1a1df23ebb2bf310cf8b5fe54500de9a8f117fc83d300024b539ccb163f903</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4268804/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4268804/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25492673$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/servlets/purl/1213421$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Gondolf, Vibe M</creatorcontrib><creatorcontrib>Stoppel, Rhea</creatorcontrib><creatorcontrib>Ebert, Berit</creatorcontrib><creatorcontrib>Rautengarten, Carsten</creatorcontrib><creatorcontrib>Liwanag, April Jm</creatorcontrib><creatorcontrib>Loqué, Dominique</creatorcontrib><creatorcontrib>Scheller, Henrik V</creatorcontrib><creatorcontrib>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><title>A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis</title><title>BMC plant biology</title><addtitle>BMC Plant Biol</addtitle><description>Engineering of plants with a composition of lignocellulosic biomass that is more suitable for downstream processing is of high interest for next-generation biofuel production. Lignocellulosic biomass contains a high proportion of pentose residues, which are more difficult to convert into fuels than hexoses. Therefore, increasing the hexose/pentose ratio in biomass is one approach for biomass improvement. A genetic engineering approach was used to investigate whether the amount of pectic galactan can be specifically increased in cell walls of Arabidopsis fiber cells, which in turn could provide a potential source of readily fermentable galactose.
First it was tested if overexpression of various plant UDP-glucose 4-epimerases (UGEs) could increase the availability of UDP-galactose and thereby increase the biosynthesis of galactan. Constitutive and tissue-specific expression of a poplar UGE and three Arabidopsis UGEs in Arabidopsis plants could not significantly increase the amount of cell wall bound galactose. We then investigated co-overexpression of AtUGE2 together with the β-1,4-galactan synthase GalS1. Co-overexpression of AtUGE2 and GalS1 led to over 80% increase in cell wall galactose levels in Arabidopsis stems, providing evidence that these proteins work synergistically. Furthermore, AtUGE2 and GalS1 overexpression in combination with overexpression of the NST1 master regulator for secondary cell wall biosynthesis resulted in increased thickness of fiber cell walls in addition to the high cell wall galactose levels. Immunofluorescence microscopy confirmed that the increased galactose was present as β-1,4-galactan in secondary cell walls.
This approach clearly indicates that simultaneous overexpression of AtUGE2 and GalS1 increases the cell wall galactose to much higher levels than can be achieved by overexpressing either one of these proteins alone. Moreover, the increased galactan content in fiber cells while improving the biomass composition had no impact on plant growth and development and hence on the overall biomass amount. Thus, we could show that the gene stacking approach described here is a promising method to engineer advanced feedstocks for biofuel production.</description><subject>09 BIOMASS FUELS</subject><subject>60 APPLIED LIFE SCIENCES</subject><subject>Analysis</subject><subject>Arabidopsis</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>artificial positive feedback loop</subject><subject>Biodiesel fuels</subject><subject>biofuels</subject><subject>Biofuels - analysis</subject><subject>biomass</subject><subject>Biosynthesis</subject><subject>Breeding</subject><subject>Cell Wall - metabolism</subject><subject>cell walls</subject><subject>Colleges & universities</subject><subject>engineering</subject><subject>Enzymes</subject><subject>feedstocks</subject><subject>fiber cells</subject><subject>fluorescence microscopy</subject><subject>fuel production</subject><subject>Galactan</subject><subject>Galactans - metabolism</subject><subject>galactose</subject><subject>Galactose - metabolism</subject><subject>GalS1</subject><subject>Gene Expression Regulation, Plant</subject><subject>gene stacking</subject><subject>genes</subject><subject>Genetic aspects</subject><subject>Genetic engineering</subject><subject>Genetically modified organisms</subject><subject>Glucose</subject><subject>growth and development</subject><subject>hexoses</subject><subject>Laboratories</subject><subject>Lignin</subject><subject>Lignocellulose</subject><subject>NST1</subject><subject>Pectin</subject><subject>pentoses</subject><subject>Phylogenetics</subject><subject>Physiological aspects</subject><subject>plant cell wall</subject><subject>plant growth</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plants, Genetically Modified - genetics</subject><subject>Plants, Genetically Modified - metabolism</subject><subject>Populus</subject><subject>Populus - genetics</subject><subject>Populus - metabolism</subject><subject>Promoter Regions, Genetic</subject><subject>proteins</subject><subject>Scholarships & fellowships</subject><subject>stems</subject><subject>UDP-glucose 4-epimerase</subject><subject>UDPglucose 4-Epimerase - genetics</subject><subject>UDPglucose 4-Epimerase - metabolism</subject><issn>1471-2229</issn><issn>1471-2229</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkl1vFCEUhidGY-vqD_DGEL3Ri6kcYL5ummwaP5o0MfHjmjDMmRnqLIzA1O2_l3Vr7RpjDCEQzvMe4Jw3y54CPQGoy9cBWF3RnILIKRci397LjkFUkDPGmvt39kfZoxAuKYWqFs3D7IgVomFlxY-zcU0GtEhCVPqrsQNR8-yd0iOZUHWBREfQDsYieuzIPCkbA_lu4khGM4zTNTFWe1QhBQc1KR2VTcornEKKkLVXrencHEx4nD3o1RTwyc26yr68ffP57H1-8eHd-dn6Itclg5gD60BB1zOObcvangPVfd0WPRaioLTDRtU9QNXrmnecUspEW_BG6xZK3jeUr7LTfd55aTfYabTRq0nO3myUv5ZOGXkYsWaUg7uSgpV1TUVK8HyfwIVoZNAmoh61sxZ1lMCAizRX2cubW7z7tmCIcmOCxinVB90SJEsvA8bLnw_6NwplI5qKNSD-Ay2Y4DWtioS--AO9dIu3qbKJ4hUrWMGr31TqDUpje5e-rHdJ5TpVrago1DxRJ3-h0uhwY9LPsTfp_EDw6kCQmIjbOKglBHn-6eMhC3tWexeCx_62FUDlzsVy72KZXCx3LpbbpHl2t4e3il-25T8ALKTq-Q</recordid><startdate>20141210</startdate><enddate>20141210</enddate><creator>Gondolf, Vibe M</creator><creator>Stoppel, Rhea</creator><creator>Ebert, Berit</creator><creator>Rautengarten, Carsten</creator><creator>Liwanag, April Jm</creator><creator>Loqué, Dominique</creator><creator>Scheller, Henrik V</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7S9</scope><scope>L.6</scope><scope>OIOZB</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>20141210</creationdate><title>A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis</title><author>Gondolf, Vibe M ; Stoppel, Rhea ; Ebert, Berit ; Rautengarten, Carsten ; Liwanag, April Jm ; Loqué, Dominique ; Scheller, Henrik V</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c621t-12d1a1df23ebb2bf310cf8b5fe54500de9a8f117fc83d300024b539ccb163f903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>09 BIOMASS FUELS</topic><topic>60 APPLIED LIFE SCIENCES</topic><topic>Analysis</topic><topic>Arabidopsis</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>artificial positive feedback loop</topic><topic>Biodiesel fuels</topic><topic>biofuels</topic><topic>Biofuels - analysis</topic><topic>biomass</topic><topic>Biosynthesis</topic><topic>Breeding</topic><topic>Cell Wall - metabolism</topic><topic>cell walls</topic><topic>Colleges & universities</topic><topic>engineering</topic><topic>Enzymes</topic><topic>feedstocks</topic><topic>fiber cells</topic><topic>fluorescence microscopy</topic><topic>fuel production</topic><topic>Galactan</topic><topic>Galactans - metabolism</topic><topic>galactose</topic><topic>Galactose - metabolism</topic><topic>GalS1</topic><topic>Gene Expression Regulation, Plant</topic><topic>gene stacking</topic><topic>genes</topic><topic>Genetic aspects</topic><topic>Genetic engineering</topic><topic>Genetically modified organisms</topic><topic>Glucose</topic><topic>growth and development</topic><topic>hexoses</topic><topic>Laboratories</topic><topic>Lignin</topic><topic>Lignocellulose</topic><topic>NST1</topic><topic>Pectin</topic><topic>pentoses</topic><topic>Phylogenetics</topic><topic>Physiological aspects</topic><topic>plant cell wall</topic><topic>plant growth</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Plants, Genetically Modified - metabolism</topic><topic>Populus</topic><topic>Populus - genetics</topic><topic>Populus - metabolism</topic><topic>Promoter Regions, Genetic</topic><topic>proteins</topic><topic>Scholarships & fellowships</topic><topic>stems</topic><topic>UDP-glucose 4-epimerase</topic><topic>UDPglucose 4-Epimerase - genetics</topic><topic>UDPglucose 4-Epimerase - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gondolf, Vibe M</creatorcontrib><creatorcontrib>Stoppel, Rhea</creatorcontrib><creatorcontrib>Ebert, Berit</creatorcontrib><creatorcontrib>Rautengarten, Carsten</creatorcontrib><creatorcontrib>Liwanag, April Jm</creatorcontrib><creatorcontrib>Loqué, Dominique</creatorcontrib><creatorcontrib>Scheller, Henrik V</creatorcontrib><creatorcontrib>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - 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Lignocellulosic biomass contains a high proportion of pentose residues, which are more difficult to convert into fuels than hexoses. Therefore, increasing the hexose/pentose ratio in biomass is one approach for biomass improvement. A genetic engineering approach was used to investigate whether the amount of pectic galactan can be specifically increased in cell walls of Arabidopsis fiber cells, which in turn could provide a potential source of readily fermentable galactose.
First it was tested if overexpression of various plant UDP-glucose 4-epimerases (UGEs) could increase the availability of UDP-galactose and thereby increase the biosynthesis of galactan. Constitutive and tissue-specific expression of a poplar UGE and three Arabidopsis UGEs in Arabidopsis plants could not significantly increase the amount of cell wall bound galactose. We then investigated co-overexpression of AtUGE2 together with the β-1,4-galactan synthase GalS1. Co-overexpression of AtUGE2 and GalS1 led to over 80% increase in cell wall galactose levels in Arabidopsis stems, providing evidence that these proteins work synergistically. Furthermore, AtUGE2 and GalS1 overexpression in combination with overexpression of the NST1 master regulator for secondary cell wall biosynthesis resulted in increased thickness of fiber cell walls in addition to the high cell wall galactose levels. Immunofluorescence microscopy confirmed that the increased galactose was present as β-1,4-galactan in secondary cell walls.
This approach clearly indicates that simultaneous overexpression of AtUGE2 and GalS1 increases the cell wall galactose to much higher levels than can be achieved by overexpressing either one of these proteins alone. Moreover, the increased galactan content in fiber cells while improving the biomass composition had no impact on plant growth and development and hence on the overall biomass amount. Thus, we could show that the gene stacking approach described here is a promising method to engineer advanced feedstocks for biofuel production.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>25492673</pmid><doi>10.1186/s12870-014-0344-x</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 09 BIOMASS FUELS 60 APPLIED LIFE SCIENCES Analysis Arabidopsis Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis Proteins - genetics Arabidopsis Proteins - metabolism artificial positive feedback loop Biodiesel fuels biofuels Biofuels - analysis biomass Biosynthesis Breeding Cell Wall - metabolism cell walls Colleges & universities engineering Enzymes feedstocks fiber cells fluorescence microscopy fuel production Galactan Galactans - metabolism galactose Galactose - metabolism GalS1 Gene Expression Regulation, Plant gene stacking genes Genetic aspects Genetic engineering Genetically modified organisms Glucose growth and development hexoses Laboratories Lignin Lignocellulose NST1 Pectin pentoses Phylogenetics Physiological aspects plant cell wall plant growth Plant Proteins - genetics Plant Proteins - metabolism Plants, Genetically Modified - genetics Plants, Genetically Modified - metabolism Populus Populus - genetics Populus - metabolism Promoter Regions, Genetic proteins Scholarships & fellowships stems UDP-glucose 4-epimerase UDPglucose 4-Epimerase - genetics UDPglucose 4-Epimerase - metabolism |
title | A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis |
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