origin, evolution and proposed stabilization of the terms 'genome size' and 'C-value' to describe nuclear DNA contents

Background Perusing the literature on nuclear 'genome size' shows that the term is not stabilized, but applied with different meanings. It is used for the DNA content of the complete chromosome complement (with chromosome number n), for which others use 'C-value', but also for th...

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Veröffentlicht in:Annals of botany 2005-01, Vol.95 (1), p.255-260
Hauptverfasser: Greilhuber, J, Dolezel, J, Lysak, M.A, Bennett, M.D
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creator Greilhuber, J
Dolezel, J
Lysak, M.A
Bennett, M.D
description Background Perusing the literature on nuclear 'genome size' shows that the term is not stabilized, but applied with different meanings. It is used for the DNA content of the complete chromosome complement (with chromosome number n), for which others use 'C-value', but also for the DNA content of the monoploid chromosome set only (with chromosome number x). Reconsideration of the terminology is required. Aim Our purpose is to discuss the currently unstable usage of the terms 'genome size' and 'C-value', and to propose a new unified terminology which can describe nuclear DNA contents with ease and without ambiguity. Proposals We argue that there is a need to maintain the term genome size in a broad sense as a covering term, because it is widely understood, short and phonetically pleasing. Proposals are made for a unified and consensual terminology. In this, 'genome size' should mean the DNA content based on chromosome number x and n, and should be used mainly in a general sense. The necessary distinction of the kinds of genome sizes is made by the adjectives 'monoploid' and the neology 'holoploid'. 'Holoploid genome size' is a shortcut for the DNA content of the whole chromosome complement characteristic for the individual (and by generalization for the population, species, etc.) irrespective of the degree of generative polyploidy, aneuploidies, etc. This term was lacking in the terminology and is for reasons of linguistic consistency indispensable. The abbreviated terms for monoploid and holoploid genome size are, respectively, Cx-value and C-value. Quantitative data on genome size should always indicate the C-level by a numerical prefix, such as 1C, 1Cx, 2C, etc. The proposed conventions cover general fundamental aspects relating to genome size in plants and animals, but do not treat in detail cytogenetic particularities (e.g. haploids, hybrids, etc.) which will need minor extensions of the present scheme in a future paper.
doi_str_mv 10.1093/aob/mci019
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It is used for the DNA content of the complete chromosome complement (with chromosome number n), for which others use 'C-value', but also for the DNA content of the monoploid chromosome set only (with chromosome number x). Reconsideration of the terminology is required. Aim Our purpose is to discuss the currently unstable usage of the terms 'genome size' and 'C-value', and to propose a new unified terminology which can describe nuclear DNA contents with ease and without ambiguity. Proposals We argue that there is a need to maintain the term genome size in a broad sense as a covering term, because it is widely understood, short and phonetically pleasing. Proposals are made for a unified and consensual terminology. In this, 'genome size' should mean the DNA content based on chromosome number x and n, and should be used mainly in a general sense. The necessary distinction of the kinds of genome sizes is made by the adjectives 'monoploid' and the neology 'holoploid'. 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'Holoploid genome size' is a shortcut for the DNA content of the whole chromosome complement characteristic for the individual (and by generalization for the population, species, etc.) irrespective of the degree of generative polyploidy, aneuploidies, etc. This term was lacking in the terminology and is for reasons of linguistic consistency indispensable. The abbreviated terms for monoploid and holoploid genome size are, respectively, Cx-value and C-value. Quantitative data on genome size should always indicate the C-level by a numerical prefix, such as 1C, 1Cx, 2C, etc. The proposed conventions cover general fundamental aspects relating to genome size in plants and animals, but do not treat in detail cytogenetic particularities (e.g. haploids, hybrids, etc.) which will need minor extensions of the present scheme in a future paper.</description><subject>C-value</subject><subject>cell nucleus</subject><subject>Cell Nucleus - genetics</subject><subject>Chromosomes</subject><subject>Cx-value</subject><subject>DEFINING 'C-VALUE' AND 'GENOME SIZE'</subject><subject>DNA</subject><subject>DNA content</subject><subject>DNA, Plant - analysis</subject><subject>DNA, Plant - genetics</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>genome</subject><subject>Genome size</subject><subject>Genome, Plant</subject><subject>Genomes</subject><subject>Haploidy</subject><subject>holoploid</subject><subject>monoploid</subject><subject>plant genetics</subject><subject>Plants</subject><subject>Plants - genetics</subject><subject>Ploidies</subject><subject>polyploid</subject><subject>Polyploidy</subject><subject>quantitative analysis</subject><subject>Terminology</subject><issn>0305-7364</issn><issn>1095-8290</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1vEzEQxVcIREPhwh2wOBAJsdTfji9IVYAWqSpUUIG4WN7d2dRhdx1sbwT963GaKHxcOFn2-3nezLyieEjwS4I1O7K-Ouprh4m-VUzyiyhnVOPbxQQzLErFJD8o7sW4xBhTqcnd4oAIoSVXbFKsfXALN7xAsPbdmJwfkB0atAp-5SM0KCZbuc5d2xvJtyhdAUoQ-oimCxh8Dyi6a5je_JrOy7XtxnxLHjUQ6-AqQMNYd2ADen1-jGo_JBhSvF_caW0X4cHuPCwu3775ND8tz96fvJsfn5W1mPFUWkb0DDhtlJK6VbVogcm20lphKnBjhZC41gAcV9JSAhIzCzWzDWOqqTBjh8Wrbd3VWPXQ1Nk72M6sgutt-Gm8deZvZXBXZuHXhlMuFeW5wLNdgeC_jxCT6V2soevsAH6MRipGJWf4vyAlhGmiSAaf_gMu_RiGvAVDtMCCKL6xfb6F6uBjDNDuWybYbEI3OXSzDT3Dj_8c8je6SzkDj7bAMiYf9jqnSuc1b9zKre5igh973YZvm_mUMKdfvpoLRecX5x9OzOfMP9nyrfXGLoKL5vIjxYRhnJPRM8p-AXOuy5M</recordid><startdate>20050101</startdate><enddate>20050101</enddate><creator>Greilhuber, J</creator><creator>Dolezel, J</creator><creator>Lysak, M.A</creator><creator>Bennett, M.D</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7SN</scope><scope>7T7</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20050101</creationdate><title>origin, evolution and proposed stabilization of the terms 'genome size' and 'C-value' to describe nuclear DNA contents</title><author>Greilhuber, J ; 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source Jstor Complete Legacy; Oxford University Press Journals All Titles (1996-Current); MEDLINE; EZB-FREE-00999 freely available EZB journals; PubMed Central
subjects C-value
cell nucleus
Cell Nucleus - genetics
Chromosomes
Cx-value
DEFINING 'C-VALUE' AND 'GENOME SIZE'
DNA
DNA content
DNA, Plant - analysis
DNA, Plant - genetics
Evolution
Evolution, Molecular
genome
Genome size
Genome, Plant
Genomes
Haploidy
holoploid
monoploid
plant genetics
Plants
Plants - genetics
Ploidies
polyploid
Polyploidy
quantitative analysis
Terminology
title origin, evolution and proposed stabilization of the terms 'genome size' and 'C-value' to describe nuclear DNA contents
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