Life history evolution and genome size in subtribe Oncidiinae (Orchidaceae)
• Background and Aims Within Oncidiinae, there are several groups of species that are effectively annuals, and we wished to see if these species had smaller genome sizes than average for the subtribe. • Methods Fifty-four genome size estimates (50 of which are new) for species in subtribe Oncidiinae...
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Veröffentlicht in: | Annals of botany 2005-01, Vol.95 (1), p.191-199 |
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description | • Background and Aims Within Oncidiinae, there are several groups of species that are effectively annuals, and we wished to see if these species had smaller genome sizes than average for the subtribe. • Methods Fifty-four genome size estimates (50 of which are new) for species in subtribe Oncidiinae (Orchidaceae) were examined for the first time in a phylogenetic context to evaluate hypotheses concerning genome sizes and life history traits. • Results and Conclusions Within the limits of still relatively sparse sampling, the species that are effectively annuals do appear to have smaller genome sizes than average. However, the genome sizes of their immediate sister group are also small, indicating that changes in genome size preceded the change in life history traits. Genome sizes and chromosome numbers also do not correlate; some slowly growing species have lower chromosome numbers but large genomes and vice versa. Based on a survey of the literature on orchids, it is also clear that epiphytic species have smaller genome sizes than do terrestrial species, which could be an effect of different water relations or the fact that most terrestrial orchids are geophytic or have distinct growth and dormancy phases. |
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However, the genome sizes of their immediate sister group are also small, indicating that changes in genome size preceded the change in life history traits. Genome sizes and chromosome numbers also do not correlate; some slowly growing species have lower chromosome numbers but large genomes and vice versa. Based on a survey of the literature on orchids, it is also clear that epiphytic species have smaller genome sizes than do terrestrial species, which could be an effect of different water relations or the fact that most terrestrial orchids are geophytic or have distinct growth and dormancy phases.</description><identifier>ISSN: 0305-7364</identifier><identifier>EISSN: 1095-8290</identifier><identifier>DOI: 10.1093/aob/mci012</identifier><identifier>PMID: 15596466</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Biological taxonomies ; cell nucleus ; character optimization ; chromosome number ; Chromosomes ; DNA ; Epiphytes ; Estimated taxes ; Evolution ; Evolution, Molecular ; genetic variation ; genome ; Genome size ; genome size evolution ; Genome, Plant ; life history ; MECHANISMS AND EVOLUTIONARY PATTERNS OF GENOME SIZE CHANGE ; Oncidiinae ; Orchidaceae ; Orchidaceae - genetics ; orchids ; Phylogenetics ; Phylogeny ; Plants ; Ploidies ; quantitative analysis ; Species Specificity ; Taxa ; twig epiphytes</subject><ispartof>Annals of botany, 2005-01, Vol.95 (1), p.191-199</ispartof><rights>Annals of Botany Company 2005</rights><rights>Copyright Oxford University Press(England) Jan 2, 2005</rights><rights>Annals of Botany 95/1 © Annals of Botany Company 2005; all rights reserved 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c518t-498696cd945aba46364784805f14632356672666e1d94d1e730e72da43de9fb33</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/42795837$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/42795837$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,723,776,780,799,881,27901,27902,53766,53768,57992,58225</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15596466$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chase, M.W</creatorcontrib><creatorcontrib>Hanson, L</creatorcontrib><creatorcontrib>Albert, V.A</creatorcontrib><creatorcontrib>Whitten, W.M</creatorcontrib><creatorcontrib>Williams, N.H</creatorcontrib><title>Life history evolution and genome size in subtribe Oncidiinae (Orchidaceae)</title><title>Annals of botany</title><addtitle>Ann Bot</addtitle><description>• Background and Aims Within Oncidiinae, there are several groups of species that are effectively annuals, and we wished to see if these species had smaller genome sizes than average for the subtribe. • Methods Fifty-four genome size estimates (50 of which are new) for species in subtribe Oncidiinae (Orchidaceae) were examined for the first time in a phylogenetic context to evaluate hypotheses concerning genome sizes and life history traits. • Results and Conclusions Within the limits of still relatively sparse sampling, the species that are effectively annuals do appear to have smaller genome sizes than average. However, the genome sizes of their immediate sister group are also small, indicating that changes in genome size preceded the change in life history traits. Genome sizes and chromosome numbers also do not correlate; some slowly growing species have lower chromosome numbers but large genomes and vice versa. Based on a survey of the literature on orchids, it is also clear that epiphytic species have smaller genome sizes than do terrestrial species, which could be an effect of different water relations or the fact that most terrestrial orchids are geophytic or have distinct growth and dormancy phases.</description><subject>Biological taxonomies</subject><subject>cell nucleus</subject><subject>character optimization</subject><subject>chromosome number</subject><subject>Chromosomes</subject><subject>DNA</subject><subject>Epiphytes</subject><subject>Estimated taxes</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>genetic variation</subject><subject>genome</subject><subject>Genome size</subject><subject>genome size evolution</subject><subject>Genome, Plant</subject><subject>life history</subject><subject>MECHANISMS AND EVOLUTIONARY PATTERNS OF GENOME SIZE CHANGE</subject><subject>Oncidiinae</subject><subject>Orchidaceae</subject><subject>Orchidaceae - genetics</subject><subject>orchids</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plants</subject><subject>Ploidies</subject><subject>quantitative analysis</subject><subject>Species Specificity</subject><subject>Taxa</subject><subject>twig epiphytes</subject><issn>0305-7364</issn><issn>1095-8290</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtv1DAUhS0EokNhwx6IWFSAFOq34w1SNTyKGGkWUITYWE5yM-Npxi52UlF-PR4yGh4bVpZ9Ph-dew9CDwl-SbBmpzbUp9vGYUJvoVl-EWVFNb6NZphhUSom-RG6l9IGY0ylJnfRERFCSy7lDH1YuA6KtUtDiDcFXId-HFzwhfVtsQIftlAk9wMK54s01kN0NRRL37jWOW-heLaMzdq1tgELz--jO53tEzzYn8fo4u2bT_PzcrF8935-tigbQaqh5LqSWjat5sLWlsucT1W8wqIj-UKZkFJRKSWQjLQEFMOgaGs5a0F3NWPH6NXkezXWW2gb8EO0vbmKbmvjjQnWmb8V79ZmFa4Np1wqorLByd4ghm8jpMFsXWqg762HMCYjFeOVVPK_IFFKc8V2jk__ATdhjD5vwRAtCMZK6Ay9mKAmhpQidIfIBJtdkyY3aaYmM_z4zyF_o_vqMvBoAja77g46p0qL6lekctJzt_D9oNt4uZtPCXP-5at5LTCdY0HM58w_mfjOBmNX0SVz8ZFiwjDWCuv85yelW7rF</recordid><startdate>20050101</startdate><enddate>20050101</enddate><creator>Chase, M.W</creator><creator>Hanson, L</creator><creator>Albert, V.A</creator><creator>Whitten, W.M</creator><creator>Williams, N.H</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7SN</scope><scope>7T7</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20050101</creationdate><title>Life history evolution and genome size in subtribe Oncidiinae (Orchidaceae)</title><author>Chase, M.W ; Hanson, L ; Albert, V.A ; Whitten, W.M ; Williams, N.H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c518t-498696cd945aba46364784805f14632356672666e1d94d1e730e72da43de9fb33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Biological taxonomies</topic><topic>cell nucleus</topic><topic>character optimization</topic><topic>chromosome number</topic><topic>Chromosomes</topic><topic>DNA</topic><topic>Epiphytes</topic><topic>Estimated taxes</topic><topic>Evolution</topic><topic>Evolution, Molecular</topic><topic>genetic variation</topic><topic>genome</topic><topic>Genome size</topic><topic>genome size evolution</topic><topic>Genome, Plant</topic><topic>life history</topic><topic>MECHANISMS AND EVOLUTIONARY PATTERNS OF GENOME SIZE CHANGE</topic><topic>Oncidiinae</topic><topic>Orchidaceae</topic><topic>Orchidaceae - genetics</topic><topic>orchids</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plants</topic><topic>Ploidies</topic><topic>quantitative analysis</topic><topic>Species Specificity</topic><topic>Taxa</topic><topic>twig epiphytes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chase, M.W</creatorcontrib><creatorcontrib>Hanson, L</creatorcontrib><creatorcontrib>Albert, V.A</creatorcontrib><creatorcontrib>Whitten, W.M</creatorcontrib><creatorcontrib>Williams, N.H</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Annals of botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chase, M.W</au><au>Hanson, L</au><au>Albert, V.A</au><au>Whitten, W.M</au><au>Williams, N.H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Life history evolution and genome size in subtribe Oncidiinae (Orchidaceae)</atitle><jtitle>Annals of botany</jtitle><addtitle>Ann Bot</addtitle><date>2005-01-01</date><risdate>2005</risdate><volume>95</volume><issue>1</issue><spage>191</spage><epage>199</epage><pages>191-199</pages><issn>0305-7364</issn><eissn>1095-8290</eissn><abstract>• Background and Aims Within Oncidiinae, there are several groups of species that are effectively annuals, and we wished to see if these species had smaller genome sizes than average for the subtribe. • Methods Fifty-four genome size estimates (50 of which are new) for species in subtribe Oncidiinae (Orchidaceae) were examined for the first time in a phylogenetic context to evaluate hypotheses concerning genome sizes and life history traits. • Results and Conclusions Within the limits of still relatively sparse sampling, the species that are effectively annuals do appear to have smaller genome sizes than average. However, the genome sizes of their immediate sister group are also small, indicating that changes in genome size preceded the change in life history traits. Genome sizes and chromosome numbers also do not correlate; some slowly growing species have lower chromosome numbers but large genomes and vice versa. Based on a survey of the literature on orchids, it is also clear that epiphytic species have smaller genome sizes than do terrestrial species, which could be an effect of different water relations or the fact that most terrestrial orchids are geophytic or have distinct growth and dormancy phases.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>15596466</pmid><doi>10.1093/aob/mci012</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biological taxonomies cell nucleus character optimization chromosome number Chromosomes DNA Epiphytes Estimated taxes Evolution Evolution, Molecular genetic variation genome Genome size genome size evolution Genome, Plant life history MECHANISMS AND EVOLUTIONARY PATTERNS OF GENOME SIZE CHANGE Oncidiinae Orchidaceae Orchidaceae - genetics orchids Phylogenetics Phylogeny Plants Ploidies quantitative analysis Species Specificity Taxa twig epiphytes |
title | Life history evolution and genome size in subtribe Oncidiinae (Orchidaceae) |
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