Cloning, expression, purification, crystallization and preliminary X-ray characterization of allantoinase from Bacillus licheniformis ATCC 14580
Allantoinase, a member of the amidohydrolase superfamily, exists in a wide variety of organisms, including bacteria, fungi, plants and a few animals, such as fishes and amphibians. Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1—C2 amide...
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Veröffentlicht in: | Acta crystallographica. Section F, Structural biology communications Structural biology communications, 2014-11, Vol.70 (11), p.1513-1516 |
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description | Allantoinase, a member of the amidohydrolase superfamily, exists in a wide variety of organisms, including bacteria, fungi, plants and a few animals, such as fishes and amphibians. Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1—C2 amide bond of the five‐membered hydantoin ring. Allantoinase from Bacillus licheniformis (AllBali) presents an inverted enantioselectivity towards allantoin (R‐enantioselective), which is a distinguishable feature that is not observed for other allantoinases. In this work, B. licheniformis ATCC 14580 allantoinase (AllBali) containing a C‐terminal His6 tag was overproduced in Escherichia coli and purified to homogeneity. Crystals of AllBali were obtained by the vapour‐diffusion method using 0.1 M potassium thiocyanate, 20%(w/v) polyethylene glycol 3350 as a crystallization solution. X‐ray diffraction data were collected to a resolution of 3.5 Å with an Rmerge of 29.2% from a crystal belonging to space group P1211, with unit‐cell parameters a = 54.93, b = 164.74, c = 106.89 Å, β = 98.49°. There are four molecules in the asymmetric unit with a solvent content of 47% as estimated from the Matthews coefficient (VM = 2.34 Å3 Da−1). |
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Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1—C2 amide bond of the five‐membered hydantoin ring. Allantoinase from Bacillus licheniformis (AllBali) presents an inverted enantioselectivity towards allantoin (R‐enantioselective), which is a distinguishable feature that is not observed for other allantoinases. In this work, B. licheniformis ATCC 14580 allantoinase (AllBali) containing a C‐terminal His6 tag was overproduced in Escherichia coli and purified to homogeneity. Crystals of AllBali were obtained by the vapour‐diffusion method using 0.1 M potassium thiocyanate, 20%(w/v) polyethylene glycol 3350 as a crystallization solution. X‐ray diffraction data were collected to a resolution of 3.5 Å with an Rmerge of 29.2% from a crystal belonging to space group P1211, with unit‐cell parameters a = 54.93, b = 164.74, c = 106.89 Å, β = 98.49°. There are four molecules in the asymmetric unit with a solvent content of 47% as estimated from the Matthews coefficient (VM = 2.34 Å3 Da−1).</description><identifier>ISSN: 2053-230X</identifier><identifier>EISSN: 2053-230X</identifier><identifier>DOI: 10.1107/S2053230X14021608</identifier><identifier>PMID: 25372819</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>allantoin ; allantoinase ; amidohydrolase ; Amidohydrolases - biosynthesis ; Amidohydrolases - chemistry ; Amidohydrolases - isolation & purification ; Bacillus - enzymology ; Bacillus licheniformis ; Cloning, Molecular - methods ; Crystallization Communications ; Gene Expression Regulation, Bacterial ; X-Ray Diffraction</subject><ispartof>Acta crystallographica. 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Section F, Structural biology communications</title><addtitle>Acta Crystallographica Section F</addtitle><description>Allantoinase, a member of the amidohydrolase superfamily, exists in a wide variety of organisms, including bacteria, fungi, plants and a few animals, such as fishes and amphibians. Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1—C2 amide bond of the five‐membered hydantoin ring. Allantoinase from Bacillus licheniformis (AllBali) presents an inverted enantioselectivity towards allantoin (R‐enantioselective), which is a distinguishable feature that is not observed for other allantoinases. In this work, B. licheniformis ATCC 14580 allantoinase (AllBali) containing a C‐terminal His6 tag was overproduced in Escherichia coli and purified to homogeneity. Crystals of AllBali were obtained by the vapour‐diffusion method using 0.1 M potassium thiocyanate, 20%(w/v) polyethylene glycol 3350 as a crystallization solution. X‐ray diffraction data were collected to a resolution of 3.5 Å with an Rmerge of 29.2% from a crystal belonging to space group P1211, with unit‐cell parameters a = 54.93, b = 164.74, c = 106.89 Å, β = 98.49°. There are four molecules in the asymmetric unit with a solvent content of 47% as estimated from the Matthews coefficient (VM = 2.34 Å3 Da−1).</description><subject>allantoin</subject><subject>allantoinase</subject><subject>amidohydrolase</subject><subject>Amidohydrolases - biosynthesis</subject><subject>Amidohydrolases - chemistry</subject><subject>Amidohydrolases - isolation & purification</subject><subject>Bacillus - enzymology</subject><subject>Bacillus licheniformis</subject><subject>Cloning, Molecular - methods</subject><subject>Crystallization Communications</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>X-Ray Diffraction</subject><issn>2053-230X</issn><issn>2053-230X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1u1DAUhSMEolXpA7BBltiwaMA_-d0gTSNakEqrqkUzrCzHue64OPbUTqDDU_DIOJ12VGDByvb1d459dJLkJcFvCcHluwuKc0YZXpAMU1Lg6kmyO43Safb00X4n2Q_hGmM8yUhZP092aM5KWpF6N_nVGGe1vTpAcLvyEIJ29gCtRq-VlmK4O0m_DoMwRv-8GyBhOxRZo3tthV-jRerFGsml8EIO4B8wp1AUCTu4iAVAyrseHQqpjRkDMlouwWrlfK8Dml02DSJZXuEXyTMlTID9-3Uv-XL04bL5mJ6cHX9qZiepzEpKUtKSVrayYqwjlLS0ICKjrAUFNVRKdqBoLuscCuhUWdVVmbFWVYVgGcOiKzDbS95vfFdj20MnwQ5eGL7yuo-ZuBOa_3lj9ZJfue88PkOqPIsGb-4NvLsZIQw8BpEwJQY3Bk4KGiuoClZG9PVf6LUbvY3xJgpnNcaMRIpsKOldCB7U9jME86k7_k_lUfPqcYqt4qHgCNQb4Ic2sP6_I599PaKHZznJpg-lG60OA9xutcJ_40XJypzPT4_56fzz-cX5Ys4b9huU18lp</recordid><startdate>201411</startdate><enddate>201411</enddate><creator>Conejero-Muriel, Mayte</creator><creator>Martínez-Gómez, Ana Isabel</creator><creator>Martínez-Rodríguez, Sergio</creator><creator>Gavira, Jose A.</creator><general>International Union of Crystallography</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201411</creationdate><title>Cloning, expression, purification, crystallization and preliminary X-ray characterization of allantoinase from Bacillus licheniformis ATCC 14580</title><author>Conejero-Muriel, Mayte ; Martínez-Gómez, Ana Isabel ; Martínez-Rodríguez, Sergio ; Gavira, Jose A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4721-1b1bcbc833d121b261a423befe9e8fcdef25c95e6edf7898743bf86a3430ad603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>allantoin</topic><topic>allantoinase</topic><topic>amidohydrolase</topic><topic>Amidohydrolases - biosynthesis</topic><topic>Amidohydrolases - chemistry</topic><topic>Amidohydrolases - isolation & purification</topic><topic>Bacillus - enzymology</topic><topic>Bacillus licheniformis</topic><topic>Cloning, Molecular - methods</topic><topic>Crystallization Communications</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>X-Ray Diffraction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Conejero-Muriel, Mayte</creatorcontrib><creatorcontrib>Martínez-Gómez, Ana Isabel</creatorcontrib><creatorcontrib>Martínez-Rodríguez, Sergio</creatorcontrib><creatorcontrib>Gavira, Jose A.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Acta crystallographica. 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Section F, Structural biology communications</jtitle><addtitle>Acta Crystallographica Section F</addtitle><date>2014-11</date><risdate>2014</risdate><volume>70</volume><issue>11</issue><spage>1513</spage><epage>1516</epage><pages>1513-1516</pages><issn>2053-230X</issn><eissn>2053-230X</eissn><abstract>Allantoinase, a member of the amidohydrolase superfamily, exists in a wide variety of organisms, including bacteria, fungi, plants and a few animals, such as fishes and amphibians. Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1—C2 amide bond of the five‐membered hydantoin ring. Allantoinase from Bacillus licheniformis (AllBali) presents an inverted enantioselectivity towards allantoin (R‐enantioselective), which is a distinguishable feature that is not observed for other allantoinases. In this work, B. licheniformis ATCC 14580 allantoinase (AllBali) containing a C‐terminal His6 tag was overproduced in Escherichia coli and purified to homogeneity. Crystals of AllBali were obtained by the vapour‐diffusion method using 0.1 M potassium thiocyanate, 20%(w/v) polyethylene glycol 3350 as a crystallization solution. X‐ray diffraction data were collected to a resolution of 3.5 Å with an Rmerge of 29.2% from a crystal belonging to space group P1211, with unit‐cell parameters a = 54.93, b = 164.74, c = 106.89 Å, β = 98.49°. There are four molecules in the asymmetric unit with a solvent content of 47% as estimated from the Matthews coefficient (VM = 2.34 Å3 Da−1).</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>25372819</pmid><doi>10.1107/S2053230X14021608</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | allantoin allantoinase amidohydrolase Amidohydrolases - biosynthesis Amidohydrolases - chemistry Amidohydrolases - isolation & purification Bacillus - enzymology Bacillus licheniformis Cloning, Molecular - methods Crystallization Communications Gene Expression Regulation, Bacterial X-Ray Diffraction |
title | Cloning, expression, purification, crystallization and preliminary X-ray characterization of allantoinase from Bacillus licheniformis ATCC 14580 |
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