OP19SERUM SPECTROSCOPY OF BRIAN TUMOURS: A RAPID AND ACCURATE DIAGNOSTIC TOOL
INTRODUCTION: The ability to diagnose brain tumours rapidly from serum would allow for rapid testing and decreased time to results providing a responsive diagnostic environment. ATR-FTIR (Attenuated Total Reflection - Fourier Transform Infrared Spectroscopy) generates a serum sample - fingerprint -...
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Veröffentlicht in: | Neuro-oncology (Charlottesville, Va.) Va.), 2014-10, Vol.16 (Suppl 6), p.vi19-vi19 |
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creator | Hands, J.R. Ashton, K.M. Brodbelt, A. Davis, C. Dawson, T.P. Jenkinson, M.D. Lea, R.W. Walker, C. Clemens, G. Baker, M.J. |
description | INTRODUCTION: The ability to diagnose brain tumours rapidly from serum would allow for rapid testing and decreased time to results providing a responsive diagnostic environment. ATR-FTIR (Attenuated Total Reflection - Fourier Transform Infrared Spectroscopy) generates a serum sample - fingerprint - since biomolecules exhibit different responses to different wavelengths of light. We have previously used ATR-FTIR to discriminate high grade brain cancer, low-grade brain cancer and normal serum to sensitivities and specificities on average of 93.75 and 96.53 % respectively. This paper reports the analysis of 429 patients. METHOD: 1 µl of serum was analysed in triplicate from 429 patients via ATR-FTIR. This dataset was analysed using pattern recognition algorithms for the following models 1) Cancer (n = 314) vs Non-cancer (n = 122), 2) Metastatic Brain Cancer (n = 192) vs Brain Cancer (n = 124) vs Non-Cancer (n = 122), 3) Organ of tumour origin, 4)High grade glioma (n = 52) vs low grade glioma (n = 24) vs meningioma (n = 47) 5) Subtype of Brain Cancer. RESULTS: ATR-FTIR spectroscopy was able to discriminate different groupings with high accuracy. The predicted range for each diagnostic layer was between 78.26 - 100.00 % sensitivity and specificity respectively. Interrogation of the loadings plots showed differences in Amide and lipid content of the serum. CONCLUSION: A robust reproducible method has been developed for the diagnosis of small volumes of serum. In addition multiple layers of diagnostic information can be provided from the same spectral dataset. ATR-FTIR has shown to be an excellent clinical tool for rapid diagnosis enabling a dynamic and responsive clinical environment. Future work will investigate spectroscopic changes during treatment. |
doi_str_mv | 10.1093/neuonc/nou251.19 |
format | Article |
fullrecord | <record><control><sourceid>pubmedcentral</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4200963</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>pubmedcentral_primary_oai_pubmedcentral_nih_gov_4200963</sourcerecordid><originalsourceid>FETCH-pubmedcentral_primary_oai_pubmedcentral_nih_gov_42009633</originalsourceid><addsrcrecordid>eNqljEFLwzAYhoM4cG7ePX5_oFu-1NTVgxCzbhZsU5L04CnUWbWypaNdB_57Rbzs7OHleeCBl5BrpDOkcTj39dD6zdy3A-M4w_iMjJGzMOCLKDr_dRYsON5ekMu-_6SUIY9wTDJVYGwSXWZgikRarYxUxTOoFTzoVORgy0yV2tyBAC2KdAki_5mUpRY2gWUq1rkyNpVglXqaktFbte3rqz9OyP0qsfIx2A8vu_p1U_tDV23dvmt2Vffl2qpxp8U3H-69PbobRmkcheG_D74BGolVYA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>OP19SERUM SPECTROSCOPY OF BRIAN TUMOURS: A RAPID AND ACCURATE DIAGNOSTIC TOOL</title><source>Oxford University Press Journals All Titles (1996-Current)</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><creator>Hands, J.R. ; Ashton, K.M. ; Brodbelt, A. ; Davis, C. ; Dawson, T.P. ; Jenkinson, M.D. ; Lea, R.W. ; Walker, C. ; Clemens, G. ; Baker, M.J.</creator><creatorcontrib>Hands, J.R. ; Ashton, K.M. ; Brodbelt, A. ; Davis, C. ; Dawson, T.P. ; Jenkinson, M.D. ; Lea, R.W. ; Walker, C. ; Clemens, G. ; Baker, M.J.</creatorcontrib><description>INTRODUCTION: The ability to diagnose brain tumours rapidly from serum would allow for rapid testing and decreased time to results providing a responsive diagnostic environment. ATR-FTIR (Attenuated Total Reflection - Fourier Transform Infrared Spectroscopy) generates a serum sample - fingerprint - since biomolecules exhibit different responses to different wavelengths of light. We have previously used ATR-FTIR to discriminate high grade brain cancer, low-grade brain cancer and normal serum to sensitivities and specificities on average of 93.75 and 96.53 % respectively. This paper reports the analysis of 429 patients. METHOD: 1 µl of serum was analysed in triplicate from 429 patients via ATR-FTIR. This dataset was analysed using pattern recognition algorithms for the following models 1) Cancer (n = 314) vs Non-cancer (n = 122), 2) Metastatic Brain Cancer (n = 192) vs Brain Cancer (n = 124) vs Non-Cancer (n = 122), 3) Organ of tumour origin, 4)High grade glioma (n = 52) vs low grade glioma (n = 24) vs meningioma (n = 47) 5) Subtype of Brain Cancer. RESULTS: ATR-FTIR spectroscopy was able to discriminate different groupings with high accuracy. The predicted range for each diagnostic layer was between 78.26 - 100.00 % sensitivity and specificity respectively. Interrogation of the loadings plots showed differences in Amide and lipid content of the serum. CONCLUSION: A robust reproducible method has been developed for the diagnosis of small volumes of serum. In addition multiple layers of diagnostic information can be provided from the same spectral dataset. ATR-FTIR has shown to be an excellent clinical tool for rapid diagnosis enabling a dynamic and responsive clinical environment. Future work will investigate spectroscopic changes during treatment.</description><identifier>ISSN: 1522-8517</identifier><identifier>EISSN: 1523-5866</identifier><identifier>DOI: 10.1093/neuonc/nou251.19</identifier><language>eng</language><publisher>Oxford University Press</publisher><subject>Abstracts</subject><ispartof>Neuro-oncology (Charlottesville, Va.), 2014-10, Vol.16 (Suppl 6), p.vi19-vi19</ispartof><rights>Published by Oxford University Press on behalf of the Society for Neuro-Oncology 2014. 2014</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4200963/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4200963/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids></links><search><creatorcontrib>Hands, J.R.</creatorcontrib><creatorcontrib>Ashton, K.M.</creatorcontrib><creatorcontrib>Brodbelt, A.</creatorcontrib><creatorcontrib>Davis, C.</creatorcontrib><creatorcontrib>Dawson, T.P.</creatorcontrib><creatorcontrib>Jenkinson, M.D.</creatorcontrib><creatorcontrib>Lea, R.W.</creatorcontrib><creatorcontrib>Walker, C.</creatorcontrib><creatorcontrib>Clemens, G.</creatorcontrib><creatorcontrib>Baker, M.J.</creatorcontrib><title>OP19SERUM SPECTROSCOPY OF BRIAN TUMOURS: A RAPID AND ACCURATE DIAGNOSTIC TOOL</title><title>Neuro-oncology (Charlottesville, Va.)</title><description>INTRODUCTION: The ability to diagnose brain tumours rapidly from serum would allow for rapid testing and decreased time to results providing a responsive diagnostic environment. ATR-FTIR (Attenuated Total Reflection - Fourier Transform Infrared Spectroscopy) generates a serum sample - fingerprint - since biomolecules exhibit different responses to different wavelengths of light. We have previously used ATR-FTIR to discriminate high grade brain cancer, low-grade brain cancer and normal serum to sensitivities and specificities on average of 93.75 and 96.53 % respectively. This paper reports the analysis of 429 patients. METHOD: 1 µl of serum was analysed in triplicate from 429 patients via ATR-FTIR. This dataset was analysed using pattern recognition algorithms for the following models 1) Cancer (n = 314) vs Non-cancer (n = 122), 2) Metastatic Brain Cancer (n = 192) vs Brain Cancer (n = 124) vs Non-Cancer (n = 122), 3) Organ of tumour origin, 4)High grade glioma (n = 52) vs low grade glioma (n = 24) vs meningioma (n = 47) 5) Subtype of Brain Cancer. RESULTS: ATR-FTIR spectroscopy was able to discriminate different groupings with high accuracy. The predicted range for each diagnostic layer was between 78.26 - 100.00 % sensitivity and specificity respectively. Interrogation of the loadings plots showed differences in Amide and lipid content of the serum. CONCLUSION: A robust reproducible method has been developed for the diagnosis of small volumes of serum. In addition multiple layers of diagnostic information can be provided from the same spectral dataset. ATR-FTIR has shown to be an excellent clinical tool for rapid diagnosis enabling a dynamic and responsive clinical environment. 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ATR-FTIR (Attenuated Total Reflection - Fourier Transform Infrared Spectroscopy) generates a serum sample - fingerprint - since biomolecules exhibit different responses to different wavelengths of light. We have previously used ATR-FTIR to discriminate high grade brain cancer, low-grade brain cancer and normal serum to sensitivities and specificities on average of 93.75 and 96.53 % respectively. This paper reports the analysis of 429 patients. METHOD: 1 µl of serum was analysed in triplicate from 429 patients via ATR-FTIR. This dataset was analysed using pattern recognition algorithms for the following models 1) Cancer (n = 314) vs Non-cancer (n = 122), 2) Metastatic Brain Cancer (n = 192) vs Brain Cancer (n = 124) vs Non-Cancer (n = 122), 3) Organ of tumour origin, 4)High grade glioma (n = 52) vs low grade glioma (n = 24) vs meningioma (n = 47) 5) Subtype of Brain Cancer. RESULTS: ATR-FTIR spectroscopy was able to discriminate different groupings with high accuracy. The predicted range for each diagnostic layer was between 78.26 - 100.00 % sensitivity and specificity respectively. Interrogation of the loadings plots showed differences in Amide and lipid content of the serum. CONCLUSION: A robust reproducible method has been developed for the diagnosis of small volumes of serum. In addition multiple layers of diagnostic information can be provided from the same spectral dataset. ATR-FTIR has shown to be an excellent clinical tool for rapid diagnosis enabling a dynamic and responsive clinical environment. Future work will investigate spectroscopic changes during treatment.</abstract><pub>Oxford University Press</pub><doi>10.1093/neuonc/nou251.19</doi></addata></record> |
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subjects | Abstracts |
title | OP19SERUM SPECTROSCOPY OF BRIAN TUMOURS: A RAPID AND ACCURATE DIAGNOSTIC TOOL |
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