Convenient microtiter plate-based, oxygen-independent activity assays for flavin-dependent oxidoreductases based on different redox dyes

Flavin‐dependent oxidoreductases are increasingly recognized as important biocatalysts for various industrial applications. In order to identify novel activities and to improve these enzymes in engineering approaches, suitable screening methods are necessary. We developed novel microtiter‐plate‐base...

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Veröffentlicht in:Biotechnology journal 2014-04, Vol.9 (4), p.474-482
Hauptverfasser: Brugger, Dagmar, Krondorfer, Iris, Zahma, Kawah, Stoisser, Thomas, Bolivar, Juan M., Nidetzky, Bernd, Peterbauer, Clemens K., Haltrich, Dietmar
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container_end_page 482
container_issue 4
container_start_page 474
container_title Biotechnology journal
container_volume 9
creator Brugger, Dagmar
Krondorfer, Iris
Zahma, Kawah
Stoisser, Thomas
Bolivar, Juan M.
Nidetzky, Bernd
Peterbauer, Clemens K.
Haltrich, Dietmar
description Flavin‐dependent oxidoreductases are increasingly recognized as important biocatalysts for various industrial applications. In order to identify novel activities and to improve these enzymes in engineering approaches, suitable screening methods are necessary. We developed novel microtiter‐plate‐based assays for flavin‐dependent oxidases and dehydrogenases using redox dyes as electron acceptors for these enzymes. 2,6‐dichlorophenol‐indophenol, methylene green, and thionine show absorption changes between their oxidized and reduced forms in the visible range, making it easy to judge visually changes in activity. A sample set of enzymes containing both flavoprotein oxidases and dehydrogenases – pyranose 2‐oxidase, pyranose dehydrogenase, cellobiose dehydrogenase, D‐amino acid oxidase, and L‐lactate oxidase – was selected. Assays for these enzymes are based on a direct enzymatic reduction of the redox dyes and not on the coupled detection of a reaction product as in the frequently used assays based on hydrogen peroxide formation. The different flavoproteins show low Michaelis constants with these electron acceptor substrates, and therefore these dyes need to be added in only low concentrations to assure substrate saturation. In conclusion, these electron acceptors are useful in selective, reliable and cheap MTP‐based screening assays for a range of flavin‐dependent oxidoreductases, and offer a robust method for library screening, which could find applications in enzyme engineering programs. Flavin‐dependent enzymes are of interest for a number of biotechnological applications, including their use in biocatalysis and biosensors. Identification of useful novel flavin‐dependent enzymes as well as tailoring their properties by protein engineering approaches is often hampered by the availability of suitable screening methods. Various redox dyes can be used in simple, rapid and robust screening assays for a range of flavin‐dependent oxidoreductases, which can facilitate the application of engineering approaches for this class of enzymes.
doi_str_mv 10.1002/biot.201300336
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The different flavoproteins show low Michaelis constants with these electron acceptor substrates, and therefore these dyes need to be added in only low concentrations to assure substrate saturation. In conclusion, these electron acceptors are useful in selective, reliable and cheap MTP‐based screening assays for a range of flavin‐dependent oxidoreductases, and offer a robust method for library screening, which could find applications in enzyme engineering programs. Flavin‐dependent enzymes are of interest for a number of biotechnological applications, including their use in biocatalysis and biosensors. Identification of useful novel flavin‐dependent enzymes as well as tailoring their properties by protein engineering approaches is often hampered by the availability of suitable screening methods. Various redox dyes can be used in simple, rapid and robust screening assays for a range of flavin‐dependent oxidoreductases, which can facilitate the application of engineering approaches for this class of enzymes.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>24376171</pmid><doi>10.1002/biot.201300336</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects 2,6-Dichloroindophenol - analysis
2,6-Dichloroindophenol - chemistry
2,6-Dichloroindophenol - metabolism
2,6‐dichlorophenol‐indophenol
6-dichlorophenol-indophenol
Coloring Agents - analysis
Coloring Agents - chemistry
Coloring Agents - metabolism
Enzyme Assays - methods
flavin-dependent oxidoreductases
high-throughput screening
High-Throughput Screening Assays
Methylene Blue - analogs & derivatives
Methylene Blue - analysis
Methylene Blue - chemistry
Methylene Blue - metabolism
methylene green
Oxidation-Reduction
Oxidoreductases - metabolism
Phenothiazines - analysis
Phenothiazines - chemistry
Phenothiazines - metabolism
thionine
title Convenient microtiter plate-based, oxygen-independent activity assays for flavin-dependent oxidoreductases based on different redox dyes
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