Structure and activity of regulatory elements involved in the activation of the Hoxd‐11 gene during late gastrulation
We have used reporter gene constructs to study the cis regulation of the Hoxd‐11 gene (previously Hox‐4.6) in transgenic mice. We identified a 5 kb regulatory unit, which was able to reproduce important aspects of the initial activation of the gene along the major body axis. The comparison of the nu...
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Veröffentlicht in: | The EMBO journal 1993-09, Vol.12 (9), p.3539-3550 |
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description | We have used reporter gene constructs to study the cis regulation of the Hoxd‐11 gene (previously Hox‐4.6) in transgenic mice. We identified a 5 kb regulatory unit, which was able to reproduce important aspects of the initial activation of the gene along the major body axis. The comparison of the nucleotide sequence of this DNA fragment with the corresponding avian genomic region revealed the presence of seven highly homologous stretches of DNA outside the protein coding regions. In particular, the 3′ flanking region contained two such domains that are required to mediate the embryonic activation. A chimeric construct containing the two short homologous regions from the chicken gene could replace the complete murine fragment thus demonstrating that the conserved domains carry the main regulatory elements involved in this activation. The first half of this bipartite regulatory region has enhancer activity when tested with a heterologous promoter, while the second half is required to restrict the enhancer activity to the proper expression domain. These results suggest that stage‐ and tissue‐specific cooperation between regulatory elements is required to control properly the activity of the Hoxd‐11 promoter. |
doi_str_mv | 10.1002/j.1460-2075.1993.tb06028.x |
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We identified a 5 kb regulatory unit, which was able to reproduce important aspects of the initial activation of the gene along the major body axis. The comparison of the nucleotide sequence of this DNA fragment with the corresponding avian genomic region revealed the presence of seven highly homologous stretches of DNA outside the protein coding regions. In particular, the 3′ flanking region contained two such domains that are required to mediate the embryonic activation. A chimeric construct containing the two short homologous regions from the chicken gene could replace the complete murine fragment thus demonstrating that the conserved domains carry the main regulatory elements involved in this activation. The first half of this bipartite regulatory region has enhancer activity when tested with a heterologous promoter, while the second half is required to restrict the enhancer activity to the proper expression domain. 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Psychology ; Gastrula - cytology ; Gastrula - physiology ; Gene Expression Regulation ; Genes, Homeobox ; Introns ; Mice ; Mice, Transgenic ; Molecular embryology ; Molecular Sequence Data ; Oligodeoxyribonucleotides ; Recombinant Fusion Proteins - biosynthesis ; Regulatory Sequences, Nucleic Acid ; Sequence Deletion ; Sequence Homology, Nucleic Acid ; Spinal Cord - embryology ; Transcription, Genetic ; Vertebrates - genetics</subject><ispartof>The EMBO journal, 1993-09, Vol.12 (9), p.3539-3550</ispartof><rights>1993 European Molecular Biology Organization</rights><rights>1993 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5388-b1f8421ec3853c808a0b6ec3a29fbb6c17a566f61b9faae7e0a2f2ad2d2ef12f3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC413630/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC413630/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,27929,27930,53796,53798</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4863710$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7902810$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gérard, M.</creatorcontrib><creatorcontrib>Duboule, D.</creatorcontrib><creatorcontrib>Zákány, J.</creatorcontrib><title>Structure and activity of regulatory elements involved in the activation of the Hoxd‐11 gene during late gastrulation</title><title>The EMBO journal</title><addtitle>EMBO J</addtitle><description>We have used reporter gene constructs to study the cis regulation of the Hoxd‐11 gene (previously Hox‐4.6) in transgenic mice. We identified a 5 kb regulatory unit, which was able to reproduce important aspects of the initial activation of the gene along the major body axis. The comparison of the nucleotide sequence of this DNA fragment with the corresponding avian genomic region revealed the presence of seven highly homologous stretches of DNA outside the protein coding regions. In particular, the 3′ flanking region contained two such domains that are required to mediate the embryonic activation. A chimeric construct containing the two short homologous regions from the chicken gene could replace the complete murine fragment thus demonstrating that the conserved domains carry the main regulatory elements involved in this activation. The first half of this bipartite regulatory region has enhancer activity when tested with a heterologous promoter, while the second half is required to restrict the enhancer activity to the proper expression domain. These results suggest that stage‐ and tissue‐specific cooperation between regulatory elements is required to control properly the activity of the Hoxd‐11 promoter.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Conserved Sequence</subject><subject>Embryology: invertebrates and vertebrates. Teratology</subject><subject>Enhancer Elements, Genetic</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gastrula - cytology</subject><subject>Gastrula - physiology</subject><subject>Gene Expression Regulation</subject><subject>Genes, Homeobox</subject><subject>Introns</subject><subject>Mice</subject><subject>Mice, Transgenic</subject><subject>Molecular embryology</subject><subject>Molecular Sequence Data</subject><subject>Oligodeoxyribonucleotides</subject><subject>Recombinant Fusion Proteins - biosynthesis</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>Sequence Deletion</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Spinal Cord - embryology</subject><subject>Transcription, Genetic</subject><subject>Vertebrates - genetics</subject><issn>0261-4189</issn><issn>1460-2075</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqVkc1u1DAUhSMEKkPhEZAshNgl2E7iOEgsSlUoqIgFsLYc5zr1yBMX25nO7HgEnpEnwZmJRrBk5Z_znXuvfbLsBcEFwZi-XhekYjinuKkL0rZlETvMMOXF7kG2OkkPsxWmjOQV4e3j7EkIa4xxzRtylp01bcIJXmX3X6OfVJw8IDn2SKpotibukdPIwzBZGZ3fI7CwgTEGZMats1vo0wbFWzjyMho3zo755trt-t8_fxGCBhgB9ZM344BSHUCDDKmZPeBPs0da2gDPlvU8-_7-6tvldX7z5cPHy4ubXNUl53lHNK8oAVXyulQcc4k7lk6StrrrmCKNrBnTjHStlhIawJJqKnvaU9CE6vI8e3usezd1G-hVeoWXVtx5s5F-L5w04l9lNLdicFtRkZKVOPlfLX7vfkwQotiYoMBaOYKbgiCsbtPfNwl8cwSVdyF40KceBIs5NbEWczRijkbMqYklNbFL5ud_T3myLjEl_eWiy6Ck1V6OyoQTVnFWNgfs4ojdGwv7_xhAXH1-9-mwL_8A2QO6Jw</recordid><startdate>199309</startdate><enddate>199309</enddate><creator>Gérard, M.</creator><creator>Duboule, D.</creator><creator>Zákány, J.</creator><general>Nature Publishing Group</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>199309</creationdate><title>Structure and activity of regulatory elements involved in the activation of the Hoxd‐11 gene during late gastrulation</title><author>Gérard, M. ; Duboule, D. ; Zákány, J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5388-b1f8421ec3853c808a0b6ec3a29fbb6c17a566f61b9faae7e0a2f2ad2d2ef12f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Conserved Sequence</topic><topic>Embryology: invertebrates and vertebrates. Teratology</topic><topic>Enhancer Elements, Genetic</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gastrula - cytology</topic><topic>Gastrula - physiology</topic><topic>Gene Expression Regulation</topic><topic>Genes, Homeobox</topic><topic>Introns</topic><topic>Mice</topic><topic>Mice, Transgenic</topic><topic>Molecular embryology</topic><topic>Molecular Sequence Data</topic><topic>Oligodeoxyribonucleotides</topic><topic>Recombinant Fusion Proteins - biosynthesis</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>Sequence Deletion</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Spinal Cord - embryology</topic><topic>Transcription, Genetic</topic><topic>Vertebrates - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gérard, M.</creatorcontrib><creatorcontrib>Duboule, D.</creatorcontrib><creatorcontrib>Zákány, J.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The EMBO journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gérard, M.</au><au>Duboule, D.</au><au>Zákány, J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structure and activity of regulatory elements involved in the activation of the Hoxd‐11 gene during late gastrulation</atitle><jtitle>The EMBO journal</jtitle><addtitle>EMBO J</addtitle><date>1993-09</date><risdate>1993</risdate><volume>12</volume><issue>9</issue><spage>3539</spage><epage>3550</epage><pages>3539-3550</pages><issn>0261-4189</issn><eissn>1460-2075</eissn><coden>EMJODG</coden><abstract>We have used reporter gene constructs to study the cis regulation of the Hoxd‐11 gene (previously Hox‐4.6) in transgenic mice. We identified a 5 kb regulatory unit, which was able to reproduce important aspects of the initial activation of the gene along the major body axis. The comparison of the nucleotide sequence of this DNA fragment with the corresponding avian genomic region revealed the presence of seven highly homologous stretches of DNA outside the protein coding regions. In particular, the 3′ flanking region contained two such domains that are required to mediate the embryonic activation. A chimeric construct containing the two short homologous regions from the chicken gene could replace the complete murine fragment thus demonstrating that the conserved domains carry the main regulatory elements involved in this activation. The first half of this bipartite regulatory region has enhancer activity when tested with a heterologous promoter, while the second half is required to restrict the enhancer activity to the proper expression domain. 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subjects | Animals Base Sequence Biological and medical sciences Conserved Sequence Embryology: invertebrates and vertebrates. Teratology Enhancer Elements, Genetic Fundamental and applied biological sciences. Psychology Gastrula - cytology Gastrula - physiology Gene Expression Regulation Genes, Homeobox Introns Mice Mice, Transgenic Molecular embryology Molecular Sequence Data Oligodeoxyribonucleotides Recombinant Fusion Proteins - biosynthesis Regulatory Sequences, Nucleic Acid Sequence Deletion Sequence Homology, Nucleic Acid Spinal Cord - embryology Transcription, Genetic Vertebrates - genetics |
title | Structure and activity of regulatory elements involved in the activation of the Hoxd‐11 gene during late gastrulation |
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