Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases

Many studies have implicated a role for conformational motions during the catalytic cycle, acting to optimize the binding pocket or facilitate product release, but a more intimate role in the chemical reaction has not been described. We address this by monitoring active-site loop motion in two prote...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Science (American Association for the Advancement of Science) 2013-08, Vol.341 (6148), p.899-903
Hauptverfasser: Whittier, Sean K., Hengge, Alvan C., Loria, J. Patrick
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 903
container_issue 6148
container_start_page 899
container_title Science (American Association for the Advancement of Science)
container_volume 341
creator Whittier, Sean K.
Hengge, Alvan C.
Loria, J. Patrick
description Many studies have implicated a role for conformational motions during the catalytic cycle, acting to optimize the binding pocket or facilitate product release, but a more intimate role in the chemical reaction has not been described. We address this by monitoring active-site loop motion in two protein tyrosine phosphatases (PTPs) using nuclear magnetic resonance spectroscopy. The PTPs, YopH and PTP1B, have very different catalytic rates; however, we find in both that the active-site loop closes to its catalytically competent position at rates that mirror the phosphotyrosine cleavage kinetics. This loop contains the catalytic acid, suggesting that loop closure occurs concomitantly with the protonation of the leaving group tyrosine and explains the different kinetics of two otherwise chemically and mechanistically indistinguishable enzymes.
doi_str_mv 10.1126/science.1241735
format Article
fullrecord <record><control><sourceid>jstor_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4078984</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><jstor_id>23491261</jstor_id><sourcerecordid>23491261</sourcerecordid><originalsourceid>FETCH-LOGICAL-c542t-80986c4c0a02ca63c7daca7f4df4b1c433b95439311b9be720cbb7a5d634057c3</originalsourceid><addsrcrecordid>eNqFkc1rGzEQxUVoiF0355wSFnLpxc7oY6XVpRBM-gEJMcW5BYRWq43XrCVX2g34v6_MOsHNpSeNeL95zMxD6ALDDGPCb6JprDN2hgnDguYnaIxB5lNJgH5CYwDKpwWIfIQ-x7gGSJqkZ2hEqBTAZTFGz3Pvah82umu802324PdFzH7bl77Vnc0WKx-3Kx92bbYM2sXahqxxSd-rVbYIvrPpv9wFHxv3xutORxu_oNNat9GeH94Jevp-t5z_nN4__vg1v72fmpyRLk0oC26YAQ3EaE6NqLTRomZVzUpsGKWlzBmVFONSllYQMGUpdF5xyiAXhk7Qt8F325cbWxnruqBbtQ3NRoed8rpR_yquWakX_6oYiEIWLBl8PRgE_6e3sVObJhrbttpZ30eFCyggJ0SI_6MsUYxwzBN6_QFd-z6kKw8U5rxIOU3QzUCZdMEYbP0-Nwa1D1kdQlaHkFPH1fG67_xbqgm4HIB17Hw40plMfpj-BUVCr0M</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1427166820</pqid></control><display><type>article</type><title>Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases</title><source>MEDLINE</source><source>JSTOR Archive Collection A-Z Listing</source><source>American Association for the Advancement of Science</source><creator>Whittier, Sean K. ; Hengge, Alvan C. ; Loria, J. Patrick</creator><creatorcontrib>Whittier, Sean K. ; Hengge, Alvan C. ; Loria, J. Patrick</creatorcontrib><description>Many studies have implicated a role for conformational motions during the catalytic cycle, acting to optimize the binding pocket or facilitate product release, but a more intimate role in the chemical reaction has not been described. We address this by monitoring active-site loop motion in two protein tyrosine phosphatases (PTPs) using nuclear magnetic resonance spectroscopy. The PTPs, YopH and PTP1B, have very different catalytic rates; however, we find in both that the active-site loop closes to its catalytically competent position at rates that mirror the phosphotyrosine cleavage kinetics. This loop contains the catalytic acid, suggesting that loop closure occurs concomitantly with the protonation of the leaving group tyrosine and explains the different kinetics of two otherwise chemically and mechanistically indistinguishable enzymes.</description><identifier>ISSN: 0036-8075</identifier><identifier>EISSN: 1095-9203</identifier><identifier>DOI: 10.1126/science.1241735</identifier><identifier>PMID: 23970698</identifier><identifier>CODEN: SCIEAS</identifier><language>eng</language><publisher>United States: American Association for the Advancement of Science</publisher><subject>Bacterial Outer Membrane Proteins - chemistry ; Biochemistry ; Catalysis ; Catalysts ; Catalytic Domain ; Chemical equilibrium ; Chemistry ; Cleavage ; Closures ; DNA ; Enzymes ; HIV ; Humans ; Hydrolysis ; Interferons ; Kinetics ; Motion ; Nuclear Magnetic Resonance, Biomolecular ; Phosphates ; Phosphates - chemistry ; Phosphorus content ; Protein Conformation ; Protein Tyrosine Phosphatase, Non-Receptor Type 1 - chemistry ; Protein Tyrosine Phosphatases - chemistry ; Proteins ; Retroviridae ; Tuning ; Tyrosine ; Vanadates - chemistry</subject><ispartof>Science (American Association for the Advancement of Science), 2013-08, Vol.341 (6148), p.899-903</ispartof><rights>Copyright © 2013 American Association for the Advancement of Science</rights><rights>Copyright © 2013, American Association for the Advancement of Science</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c542t-80986c4c0a02ca63c7daca7f4df4b1c433b95439311b9be720cbb7a5d634057c3</citedby><cites>FETCH-LOGICAL-c542t-80986c4c0a02ca63c7daca7f4df4b1c433b95439311b9be720cbb7a5d634057c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23491261$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23491261$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,780,784,803,885,2884,2885,27924,27925,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23970698$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Whittier, Sean K.</creatorcontrib><creatorcontrib>Hengge, Alvan C.</creatorcontrib><creatorcontrib>Loria, J. Patrick</creatorcontrib><title>Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases</title><title>Science (American Association for the Advancement of Science)</title><addtitle>Science</addtitle><description>Many studies have implicated a role for conformational motions during the catalytic cycle, acting to optimize the binding pocket or facilitate product release, but a more intimate role in the chemical reaction has not been described. We address this by monitoring active-site loop motion in two protein tyrosine phosphatases (PTPs) using nuclear magnetic resonance spectroscopy. The PTPs, YopH and PTP1B, have very different catalytic rates; however, we find in both that the active-site loop closes to its catalytically competent position at rates that mirror the phosphotyrosine cleavage kinetics. This loop contains the catalytic acid, suggesting that loop closure occurs concomitantly with the protonation of the leaving group tyrosine and explains the different kinetics of two otherwise chemically and mechanistically indistinguishable enzymes.</description><subject>Bacterial Outer Membrane Proteins - chemistry</subject><subject>Biochemistry</subject><subject>Catalysis</subject><subject>Catalysts</subject><subject>Catalytic Domain</subject><subject>Chemical equilibrium</subject><subject>Chemistry</subject><subject>Cleavage</subject><subject>Closures</subject><subject>DNA</subject><subject>Enzymes</subject><subject>HIV</subject><subject>Humans</subject><subject>Hydrolysis</subject><subject>Interferons</subject><subject>Kinetics</subject><subject>Motion</subject><subject>Nuclear Magnetic Resonance, Biomolecular</subject><subject>Phosphates</subject><subject>Phosphates - chemistry</subject><subject>Phosphorus content</subject><subject>Protein Conformation</subject><subject>Protein Tyrosine Phosphatase, Non-Receptor Type 1 - chemistry</subject><subject>Protein Tyrosine Phosphatases - chemistry</subject><subject>Proteins</subject><subject>Retroviridae</subject><subject>Tuning</subject><subject>Tyrosine</subject><subject>Vanadates - chemistry</subject><issn>0036-8075</issn><issn>1095-9203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1rGzEQxUVoiF0355wSFnLpxc7oY6XVpRBM-gEJMcW5BYRWq43XrCVX2g34v6_MOsHNpSeNeL95zMxD6ALDDGPCb6JprDN2hgnDguYnaIxB5lNJgH5CYwDKpwWIfIQ-x7gGSJqkZ2hEqBTAZTFGz3Pvah82umu802324PdFzH7bl77Vnc0WKx-3Kx92bbYM2sXahqxxSd-rVbYIvrPpv9wFHxv3xutORxu_oNNat9GeH94Jevp-t5z_nN4__vg1v72fmpyRLk0oC26YAQ3EaE6NqLTRomZVzUpsGKWlzBmVFONSllYQMGUpdF5xyiAXhk7Qt8F325cbWxnruqBbtQ3NRoed8rpR_yquWakX_6oYiEIWLBl8PRgE_6e3sVObJhrbttpZ30eFCyggJ0SI_6MsUYxwzBN6_QFd-z6kKw8U5rxIOU3QzUCZdMEYbP0-Nwa1D1kdQlaHkFPH1fG67_xbqgm4HIB17Hw40plMfpj-BUVCr0M</recordid><startdate>20130823</startdate><enddate>20130823</enddate><creator>Whittier, Sean K.</creator><creator>Hengge, Alvan C.</creator><creator>Loria, J. Patrick</creator><general>American Association for the Advancement of Science</general><general>The American Association for the Advancement of Science</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QQ</scope><scope>7QR</scope><scope>7SC</scope><scope>7SE</scope><scope>7SN</scope><scope>7SP</scope><scope>7SR</scope><scope>7SS</scope><scope>7T7</scope><scope>7TA</scope><scope>7TB</scope><scope>7TK</scope><scope>7TM</scope><scope>7U5</scope><scope>7U9</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>H94</scope><scope>JG9</scope><scope>JQ2</scope><scope>K9.</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20130823</creationdate><title>Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases</title><author>Whittier, Sean K. ; Hengge, Alvan C. ; Loria, J. Patrick</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c542t-80986c4c0a02ca63c7daca7f4df4b1c433b95439311b9be720cbb7a5d634057c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Bacterial Outer Membrane Proteins - chemistry</topic><topic>Biochemistry</topic><topic>Catalysis</topic><topic>Catalysts</topic><topic>Catalytic Domain</topic><topic>Chemical equilibrium</topic><topic>Chemistry</topic><topic>Cleavage</topic><topic>Closures</topic><topic>DNA</topic><topic>Enzymes</topic><topic>HIV</topic><topic>Humans</topic><topic>Hydrolysis</topic><topic>Interferons</topic><topic>Kinetics</topic><topic>Motion</topic><topic>Nuclear Magnetic Resonance, Biomolecular</topic><topic>Phosphates</topic><topic>Phosphates - chemistry</topic><topic>Phosphorus content</topic><topic>Protein Conformation</topic><topic>Protein Tyrosine Phosphatase, Non-Receptor Type 1 - chemistry</topic><topic>Protein Tyrosine Phosphatases - chemistry</topic><topic>Proteins</topic><topic>Retroviridae</topic><topic>Tuning</topic><topic>Tyrosine</topic><topic>Vanadates - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Whittier, Sean K.</creatorcontrib><creatorcontrib>Hengge, Alvan C.</creatorcontrib><creatorcontrib>Loria, J. Patrick</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Ecology Abstracts</collection><collection>Electronics &amp; Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Materials Business File</collection><collection>Mechanical &amp; Transportation Engineering Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ANTE: Abstracts in New Technology &amp; Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts – Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Science (American Association for the Advancement of Science)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Whittier, Sean K.</au><au>Hengge, Alvan C.</au><au>Loria, J. Patrick</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases</atitle><jtitle>Science (American Association for the Advancement of Science)</jtitle><addtitle>Science</addtitle><date>2013-08-23</date><risdate>2013</risdate><volume>341</volume><issue>6148</issue><spage>899</spage><epage>903</epage><pages>899-903</pages><issn>0036-8075</issn><eissn>1095-9203</eissn><coden>SCIEAS</coden><abstract>Many studies have implicated a role for conformational motions during the catalytic cycle, acting to optimize the binding pocket or facilitate product release, but a more intimate role in the chemical reaction has not been described. We address this by monitoring active-site loop motion in two protein tyrosine phosphatases (PTPs) using nuclear magnetic resonance spectroscopy. The PTPs, YopH and PTP1B, have very different catalytic rates; however, we find in both that the active-site loop closes to its catalytically competent position at rates that mirror the phosphotyrosine cleavage kinetics. This loop contains the catalytic acid, suggesting that loop closure occurs concomitantly with the protonation of the leaving group tyrosine and explains the different kinetics of two otherwise chemically and mechanistically indistinguishable enzymes.</abstract><cop>United States</cop><pub>American Association for the Advancement of Science</pub><pmid>23970698</pmid><doi>10.1126/science.1241735</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0036-8075
ispartof Science (American Association for the Advancement of Science), 2013-08, Vol.341 (6148), p.899-903
issn 0036-8075
1095-9203
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_4078984
source MEDLINE; JSTOR Archive Collection A-Z Listing; American Association for the Advancement of Science
subjects Bacterial Outer Membrane Proteins - chemistry
Biochemistry
Catalysis
Catalysts
Catalytic Domain
Chemical equilibrium
Chemistry
Cleavage
Closures
DNA
Enzymes
HIV
Humans
Hydrolysis
Interferons
Kinetics
Motion
Nuclear Magnetic Resonance, Biomolecular
Phosphates
Phosphates - chemistry
Phosphorus content
Protein Conformation
Protein Tyrosine Phosphatase, Non-Receptor Type 1 - chemistry
Protein Tyrosine Phosphatases - chemistry
Proteins
Retroviridae
Tuning
Tyrosine
Vanadates - chemistry
title Conformational Motions Regulate Phosphoryl Transfer in Related Protein Tyrosine Phosphatases
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-25T01%3A49%3A00IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-jstor_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Conformational%20Motions%20Regulate%20Phosphoryl%20Transfer%20in%20Related%20Protein%20Tyrosine%20Phosphatases&rft.jtitle=Science%20(American%20Association%20for%20the%20Advancement%20of%20Science)&rft.au=Whittier,%20Sean%20K.&rft.date=2013-08-23&rft.volume=341&rft.issue=6148&rft.spage=899&rft.epage=903&rft.pages=899-903&rft.issn=0036-8075&rft.eissn=1095-9203&rft.coden=SCIEAS&rft_id=info:doi/10.1126/science.1241735&rft_dat=%3Cjstor_pubme%3E23491261%3C/jstor_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1427166820&rft_id=info:pmid/23970698&rft_jstor_id=23491261&rfr_iscdi=true