Jatropha curcas, a biofuel crop: Functional genomics for understanding metabolic pathways and genetic improvement
Jatropha curcas is currently attracting much attention as an oilseed crop for biofuel, as Jatropha can grow under climate and soil conditions that are unsuitable for food production. However, little is known about Jatropha, and there are a number of challenges to be overcome. In fact, Jatropha has n...
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Veröffentlicht in: | Biotechnology journal 2013-10, Vol.8 (10), p.1172-1182 |
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description | Jatropha curcas is currently attracting much attention as an oilseed crop for biofuel, as Jatropha can grow under climate and soil conditions that are unsuitable for food production. However, little is known about Jatropha, and there are a number of challenges to be overcome. In fact, Jatropha has not really been domesticated; most of the Jatropha accessions are toxic, which renders the seedcake unsuitable for use as animal feed. The seeds of Jatropha contain high levels of polyunsaturated fatty acids, which negatively impact the biofuel quality. Fruiting of Jatropha is fairly continuous, thus increasing costs of harvesting. Therefore, before starting any improvement program using conventional or molecular breeding techniques, understanding gene function and the genome scale of Jatropha are prerequisites. This review presents currently available and relevant information on the latest technologies (genomics, transcriptomics, proteomics and metabolomics) to decipher important metabolic pathways within Jatropha, such as oil and toxin synthesis. Further, it discusses future directions for biotechnological approaches in Jatropha breeding and improvement.
Jatropha curcas has great potential as an oilseed crop for biofuel. This review presents all currently available and relevant information on the latest omic technologies (genomics, transcriptomics, proteomics and metabolomics) applied to J. curcas to decipher important metabolic pathways, such as oil and toxin synthesis. Furthermore, the authors discuss future directions for biotechnological approaches in Jatropha breeding and improvement. |
doi_str_mv | 10.1002/biot.201300231 |
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Jatropha curcas has great potential as an oilseed crop for biofuel. This review presents all currently available and relevant information on the latest omic technologies (genomics, transcriptomics, proteomics and metabolomics) applied to J. curcas to decipher important metabolic pathways, such as oil and toxin synthesis. Furthermore, the authors discuss future directions for biotechnological approaches in Jatropha breeding and improvement.</description><identifier>ISSN: 1860-6768</identifier><identifier>EISSN: 1860-7314</identifier><identifier>DOI: 10.1002/biot.201300231</identifier><identifier>PMID: 24092674</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Biofuel ; Biofuels ; Biotechnology ; Breeding ; DNA Shuffling ; Domestication ; Genes, Plant ; Genome, Plant ; Genomics ; Jatropha - genetics ; Jatropha - growth & development ; Jatropha - metabolism ; Jatropha curcas ; Metabolic Networks and Pathways - genetics ; Plant Oils - metabolism ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Purging nut ; Reviews ; Seeds - genetics ; Seeds - metabolism ; Seeds - toxicity</subject><ispartof>Biotechnology journal, 2013-10, Vol.8 (10), p.1172-1182</ispartof><rights>2013 The Authors. Biotechnology Journal published by Wiley‐VCH Verlag GmbH & Co. KGaA, Weinheim. This is an open access article under the terms of the Creative Commons, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptions are made.</rights><rights>2013 The Authors. Biotechnology Journal published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><rights>2013 The Authors. Biotechnology Journal published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim. 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5771-7602db557399c2ccc5b3037ed9e7932f2436cfe42426902748dc5bb5195cd71e3</citedby><cites>FETCH-LOGICAL-c5771-7602db557399c2ccc5b3037ed9e7932f2436cfe42426902748dc5bb5195cd71e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fbiot.201300231$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fbiot.201300231$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24092674$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maghuly, Fatemeh</creatorcontrib><creatorcontrib>Laimer, Margit</creatorcontrib><title>Jatropha curcas, a biofuel crop: Functional genomics for understanding metabolic pathways and genetic improvement</title><title>Biotechnology journal</title><addtitle>Biotechnology Journal</addtitle><description>Jatropha curcas is currently attracting much attention as an oilseed crop for biofuel, as Jatropha can grow under climate and soil conditions that are unsuitable for food production. However, little is known about Jatropha, and there are a number of challenges to be overcome. In fact, Jatropha has not really been domesticated; most of the Jatropha accessions are toxic, which renders the seedcake unsuitable for use as animal feed. The seeds of Jatropha contain high levels of polyunsaturated fatty acids, which negatively impact the biofuel quality. Fruiting of Jatropha is fairly continuous, thus increasing costs of harvesting. Therefore, before starting any improvement program using conventional or molecular breeding techniques, understanding gene function and the genome scale of Jatropha are prerequisites. This review presents currently available and relevant information on the latest technologies (genomics, transcriptomics, proteomics and metabolomics) to decipher important metabolic pathways within Jatropha, such as oil and toxin synthesis. Further, it discusses future directions for biotechnological approaches in Jatropha breeding and improvement.
Jatropha curcas has great potential as an oilseed crop for biofuel. This review presents all currently available and relevant information on the latest omic technologies (genomics, transcriptomics, proteomics and metabolomics) applied to J. curcas to decipher important metabolic pathways, such as oil and toxin synthesis. Furthermore, the authors discuss future directions for biotechnological approaches in Jatropha breeding and improvement.</description><subject>Biofuel</subject><subject>Biofuels</subject><subject>Biotechnology</subject><subject>Breeding</subject><subject>DNA Shuffling</subject><subject>Domestication</subject><subject>Genes, Plant</subject><subject>Genome, Plant</subject><subject>Genomics</subject><subject>Jatropha - genetics</subject><subject>Jatropha - growth & development</subject><subject>Jatropha - metabolism</subject><subject>Jatropha curcas</subject><subject>Metabolic Networks and Pathways - genetics</subject><subject>Plant Oils - metabolism</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Purging nut</subject><subject>Reviews</subject><subject>Seeds - genetics</subject><subject>Seeds - metabolism</subject><subject>Seeds - toxicity</subject><issn>1860-6768</issn><issn>1860-7314</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>EIF</sourceid><recordid>eNqFkc1vEzEQxS0EoiVw5Yh85MAGfzvLAQkq-gEVFVDE0fJ6ZxPD7jq1vS3573GUEJUTp7Fn3vuN5YfQc0rmlBD2uvEhzxmhvFw4fYCO6UKRSnMqHu7PSqvFEXqS0k9ChOREPEZHTJCaKS2O0c1Hm2NYryx2U3Q2vcIWF2Y3QY9dGbzBp9Posg-j7fESxjB4l3AXIp7GFmLKdmz9uMQDZNuE3ju8tnl1ZzcJl8nWAbk0_bCO4RYGGPNT9KizfYJn-zpD308_XJ-cV5dXZxcn7y4rJ7WmlVaEtY2Umte1Y8452XDCNbQ16JqzjgmuXAeCCaZqwrRYtEXSSFpL12oKfIbe7rjrqRmgdWV1tL1ZRz_YuDHBevPvZPQrswy3RhAluWAF8HIPiOFmgpTN4JODvrcjhCkZKgTneiFLmaH5Tlq-LKUI3WENJWabk9nmZA45FcOL-487yP8GUwT1TnDne9j8B2feX1xd34dXO69PGX4fvDb-MkpzLc2Pz2fmG_uk6Ln6ar7wPyIFsS0</recordid><startdate>201310</startdate><enddate>201310</enddate><creator>Maghuly, Fatemeh</creator><creator>Laimer, Margit</creator><general>WILEY-VCH Verlag</general><general>WILEY‐VCH Verlag</general><scope>BSCLL</scope><scope>24P</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>201310</creationdate><title>Jatropha curcas, a biofuel crop: Functional genomics for understanding metabolic pathways and genetic improvement</title><author>Maghuly, Fatemeh ; Laimer, Margit</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5771-7602db557399c2ccc5b3037ed9e7932f2436cfe42426902748dc5bb5195cd71e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Biofuel</topic><topic>Biofuels</topic><topic>Biotechnology</topic><topic>Breeding</topic><topic>DNA Shuffling</topic><topic>Domestication</topic><topic>Genes, Plant</topic><topic>Genome, Plant</topic><topic>Genomics</topic><topic>Jatropha - genetics</topic><topic>Jatropha - growth & development</topic><topic>Jatropha - metabolism</topic><topic>Jatropha curcas</topic><topic>Metabolic Networks and Pathways - genetics</topic><topic>Plant Oils - metabolism</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Purging nut</topic><topic>Reviews</topic><topic>Seeds - genetics</topic><topic>Seeds - metabolism</topic><topic>Seeds - toxicity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maghuly, Fatemeh</creatorcontrib><creatorcontrib>Laimer, Margit</creatorcontrib><collection>Istex</collection><collection>Wiley Online Library Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biotechnology journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maghuly, Fatemeh</au><au>Laimer, Margit</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Jatropha curcas, a biofuel crop: Functional genomics for understanding metabolic pathways and genetic improvement</atitle><jtitle>Biotechnology journal</jtitle><addtitle>Biotechnology Journal</addtitle><date>2013-10</date><risdate>2013</risdate><volume>8</volume><issue>10</issue><spage>1172</spage><epage>1182</epage><pages>1172-1182</pages><issn>1860-6768</issn><eissn>1860-7314</eissn><abstract>Jatropha curcas is currently attracting much attention as an oilseed crop for biofuel, as Jatropha can grow under climate and soil conditions that are unsuitable for food production. However, little is known about Jatropha, and there are a number of challenges to be overcome. In fact, Jatropha has not really been domesticated; most of the Jatropha accessions are toxic, which renders the seedcake unsuitable for use as animal feed. The seeds of Jatropha contain high levels of polyunsaturated fatty acids, which negatively impact the biofuel quality. Fruiting of Jatropha is fairly continuous, thus increasing costs of harvesting. Therefore, before starting any improvement program using conventional or molecular breeding techniques, understanding gene function and the genome scale of Jatropha are prerequisites. This review presents currently available and relevant information on the latest technologies (genomics, transcriptomics, proteomics and metabolomics) to decipher important metabolic pathways within Jatropha, such as oil and toxin synthesis. Further, it discusses future directions for biotechnological approaches in Jatropha breeding and improvement.
Jatropha curcas has great potential as an oilseed crop for biofuel. This review presents all currently available and relevant information on the latest omic technologies (genomics, transcriptomics, proteomics and metabolomics) applied to J. curcas to decipher important metabolic pathways, such as oil and toxin synthesis. Furthermore, the authors discuss future directions for biotechnological approaches in Jatropha breeding and improvement.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>24092674</pmid><doi>10.1002/biot.201300231</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biofuel Biofuels Biotechnology Breeding DNA Shuffling Domestication Genes, Plant Genome, Plant Genomics Jatropha - genetics Jatropha - growth & development Jatropha - metabolism Jatropha curcas Metabolic Networks and Pathways - genetics Plant Oils - metabolism Plant Proteins - genetics Plant Proteins - metabolism Purging nut Reviews Seeds - genetics Seeds - metabolism Seeds - toxicity |
title | Jatropha curcas, a biofuel crop: Functional genomics for understanding metabolic pathways and genetic improvement |
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