The structure of cytomegalovirus immune modulator UL141 highlights structural Ig-fold versatility for receptor binding
Natural killer (NK) cells are critical components of the innate immune system as they rapidly detect and destroy infected cells. To avoid immune recognition and to allow long‐term persistence in the host, Human cytomegalovirus (HCMV) has evolved a number of genes to evade or inhibit immune effector...
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Veröffentlicht in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 2014-03, Vol.70 (3), p.851-862 |
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description | Natural killer (NK) cells are critical components of the innate immune system as they rapidly detect and destroy infected cells. To avoid immune recognition and to allow long‐term persistence in the host, Human cytomegalovirus (HCMV) has evolved a number of genes to evade or inhibit immune effector pathways. In particular, UL141 can inhibit cell‐surface expression of both the NK cell‐activating ligand CD155 as well as the TRAIL death receptors (TRAIL‐R1 and TRAIL‐R2). The crystal structure of unliganded HCMV UL141 refined to 3.25 Å resolution allowed analysis of its head‐to‐tail dimerization interface. A `dimerization‐deficient' mutant of UL141 (ddUL141) was further designed, which retained the ability to bind to TRAIL‐R2 or CD155 while losing the ability to cross‐link two receptor monomers. Structural comparison of unliganded UL141 with UL141 bound to TRAIL‐R2 further identified a mobile loop that makes intimate contacts with TRAIL‐R2 upon receptor engagement. Superposition of the Ig‐like domain of UL141 on the CD155 ligand T‐cell immunoreceptor with Ig and ITIM domains (TIGIT) revealed that UL141 can potentially engage CD155 similar to TIGIT by using the C′C′′ and GF loops. Further mutations in the TIGIT binding site of CD155 (Q63R and F128R) abrogated UL141 binding, suggesting that the Ig‐like domain of UL141 is a viral mimic of TIGIT, as it targets the same binding site on CD155 using similar `lock‐and‐key' interactions. Sequence alignment of the UL141 gene and its orthologues also showed conservation in this highly hydrophobic (L/A)X6G `lock' motif for CD155 binding as well as conservation of the TRAIL‐R2 binding patches, suggesting that these host–receptor interactions are evolutionary conserved. |
doi_str_mv | 10.1107/S1399004713033750 |
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To avoid immune recognition and to allow long‐term persistence in the host, Human cytomegalovirus (HCMV) has evolved a number of genes to evade or inhibit immune effector pathways. In particular, UL141 can inhibit cell‐surface expression of both the NK cell‐activating ligand CD155 as well as the TRAIL death receptors (TRAIL‐R1 and TRAIL‐R2). The crystal structure of unliganded HCMV UL141 refined to 3.25 Å resolution allowed analysis of its head‐to‐tail dimerization interface. A `dimerization‐deficient' mutant of UL141 (ddUL141) was further designed, which retained the ability to bind to TRAIL‐R2 or CD155 while losing the ability to cross‐link two receptor monomers. Structural comparison of unliganded UL141 with UL141 bound to TRAIL‐R2 further identified a mobile loop that makes intimate contacts with TRAIL‐R2 upon receptor engagement. Superposition of the Ig‐like domain of UL141 on the CD155 ligand T‐cell immunoreceptor with Ig and ITIM domains (TIGIT) revealed that UL141 can potentially engage CD155 similar to TIGIT by using the C′C′′ and GF loops. Further mutations in the TIGIT binding site of CD155 (Q63R and F128R) abrogated UL141 binding, suggesting that the Ig‐like domain of UL141 is a viral mimic of TIGIT, as it targets the same binding site on CD155 using similar `lock‐and‐key' interactions. Sequence alignment of the UL141 gene and its orthologues also showed conservation in this highly hydrophobic (L/A)X6G `lock' motif for CD155 binding as well as conservation of the TRAIL‐R2 binding patches, suggesting that these host–receptor interactions are evolutionary conserved.</description><identifier>ISSN: 1399-0047</identifier><identifier>ISSN: 0907-4449</identifier><identifier>EISSN: 1399-0047</identifier><identifier>DOI: 10.1107/S1399004713033750</identifier><identifier>PMID: 24598754</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>ALIGNMENT ; Animals ; CD155 ; CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY ; CRYSTAL STRUCTURE ; Crystallography, X-Ray ; cytomegalovirus ; Cytomegalovirus - chemistry ; Cytomegalovirus - genetics ; Cytomegalovirus - immunology ; DIMERIZATION ; Evolution, Molecular ; Humans ; immune modulators ; Immunoglobulins - chemistry ; Immunoglobulins - genetics ; Immunologic Factors - chemistry ; Immunologic Factors - genetics ; INTERACTIONS ; INTERFACES ; Killer Cells, Natural - chemistry ; Killer Cells, Natural - immunology ; Killer Cells, Natural - metabolism ; LIGANDS ; Membrane Glycoproteins - chemistry ; Membrane Glycoproteins - genetics ; Membrane Glycoproteins - immunology ; Mutation ; Protein Binding - genetics ; Protein Binding - immunology ; Protein Folding ; RECEPTORS ; Receptors, TNF-Related Apoptosis-Inducing Ligand - chemistry ; Receptors, TNF-Related Apoptosis-Inducing Ligand - genetics ; Receptors, Virus - chemistry ; Receptors, Virus - genetics ; Research Papers ; RESOLUTION ; Sf9 Cells ; Signal Transduction - genetics ; Signal Transduction - immunology ; Spodoptera - genetics ; SURFACES ; TRAIL-R2 ; UL141 ; Viral Proteins - chemistry ; Viral Proteins - genetics ; Viral Proteins - immunology</subject><ispartof>Acta crystallographica. 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Section D, Biological crystallography.</title><addtitle>Acta Crystallographica D</addtitle><description>Natural killer (NK) cells are critical components of the innate immune system as they rapidly detect and destroy infected cells. To avoid immune recognition and to allow long‐term persistence in the host, Human cytomegalovirus (HCMV) has evolved a number of genes to evade or inhibit immune effector pathways. In particular, UL141 can inhibit cell‐surface expression of both the NK cell‐activating ligand CD155 as well as the TRAIL death receptors (TRAIL‐R1 and TRAIL‐R2). The crystal structure of unliganded HCMV UL141 refined to 3.25 Å resolution allowed analysis of its head‐to‐tail dimerization interface. A `dimerization‐deficient' mutant of UL141 (ddUL141) was further designed, which retained the ability to bind to TRAIL‐R2 or CD155 while losing the ability to cross‐link two receptor monomers. Structural comparison of unliganded UL141 with UL141 bound to TRAIL‐R2 further identified a mobile loop that makes intimate contacts with TRAIL‐R2 upon receptor engagement. Superposition of the Ig‐like domain of UL141 on the CD155 ligand T‐cell immunoreceptor with Ig and ITIM domains (TIGIT) revealed that UL141 can potentially engage CD155 similar to TIGIT by using the C′C′′ and GF loops. Further mutations in the TIGIT binding site of CD155 (Q63R and F128R) abrogated UL141 binding, suggesting that the Ig‐like domain of UL141 is a viral mimic of TIGIT, as it targets the same binding site on CD155 using similar `lock‐and‐key' interactions. Sequence alignment of the UL141 gene and its orthologues also showed conservation in this highly hydrophobic (L/A)X6G `lock' motif for CD155 binding as well as conservation of the TRAIL‐R2 binding patches, suggesting that these host–receptor interactions are evolutionary conserved.</description><subject>ALIGNMENT</subject><subject>Animals</subject><subject>CD155</subject><subject>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</subject><subject>CRYSTAL STRUCTURE</subject><subject>Crystallography, X-Ray</subject><subject>cytomegalovirus</subject><subject>Cytomegalovirus - chemistry</subject><subject>Cytomegalovirus - genetics</subject><subject>Cytomegalovirus - immunology</subject><subject>DIMERIZATION</subject><subject>Evolution, Molecular</subject><subject>Humans</subject><subject>immune modulators</subject><subject>Immunoglobulins - chemistry</subject><subject>Immunoglobulins - genetics</subject><subject>Immunologic Factors - chemistry</subject><subject>Immunologic Factors - genetics</subject><subject>INTERACTIONS</subject><subject>INTERFACES</subject><subject>Killer Cells, Natural - chemistry</subject><subject>Killer Cells, Natural - immunology</subject><subject>Killer Cells, Natural - metabolism</subject><subject>LIGANDS</subject><subject>Membrane Glycoproteins - chemistry</subject><subject>Membrane Glycoproteins - genetics</subject><subject>Membrane Glycoproteins - immunology</subject><subject>Mutation</subject><subject>Protein Binding - genetics</subject><subject>Protein Binding - immunology</subject><subject>Protein Folding</subject><subject>RECEPTORS</subject><subject>Receptors, TNF-Related Apoptosis-Inducing Ligand - chemistry</subject><subject>Receptors, TNF-Related Apoptosis-Inducing Ligand - genetics</subject><subject>Receptors, Virus - chemistry</subject><subject>Receptors, Virus - genetics</subject><subject>Research Papers</subject><subject>RESOLUTION</subject><subject>Sf9 Cells</subject><subject>Signal Transduction - genetics</subject><subject>Signal Transduction - immunology</subject><subject>Spodoptera - genetics</subject><subject>SURFACES</subject><subject>TRAIL-R2</subject><subject>UL141</subject><subject>Viral Proteins - chemistry</subject><subject>Viral Proteins - genetics</subject><subject>Viral Proteins - immunology</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1u1DAURiMEoqXwAGxQJDZsAr6xHTsbpLZAqTQCobYwdGN5nJsZlyQebGdg3h5HU4YiFiwsW9fnfP65WfYUyEsAIl5dAK1rQpgASigVnNzLDqdSMdXu31kfZI9CuCGElCUVD7ODkvFaCs4Os83lCvMQ_Wji6DF3bW620fW41J3bWD-G3Pb9OGDeu2bsdHQ-v5oBg3xll6sujRj2uu7y82XRuq7JN-iDjrazcZu3yfFocD3JCzs0dlg-zh60ugv45HY-yq7evb08fV_MPp6dnx7PCsMZpUVT6VYwwPTAmtREcglUgkRosSKVFiANF9xUZVO3i7IxEklDmRSGML2ooKZH2etd7npc9NgYHGK6plp722u_VU5b9ffOYFdq6TaK1qzmIFPA812AC9GqYGxEszJuGNBElX6TAwVI1IvbY7z7PmKIqrfBYNfpAd0YFHDCSyZlWf0J3KM3bvRD-oSJYpwByImCHWW8C8Fju78yEDX1Xv3T--Q8u_vWvfG72Qmod8AP2-H2_4nq-Oubcn7CiaDJLXauDRF_7l3tv6lKJFh9-XCmrufza3bx6bMS9Bdfscox</recordid><startdate>201403</startdate><enddate>201403</enddate><creator>Nemčovičová, Ivana</creator><creator>Zajonc, Dirk M.</creator><general>International Union of Crystallography</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7SP</scope><scope>7SR</scope><scope>7TK</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>H8D</scope><scope>JG9</scope><scope>L7M</scope><scope>7X8</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>201403</creationdate><title>The structure of cytomegalovirus immune modulator UL141 highlights structural Ig-fold versatility for receptor binding</title><author>Nemčovičová, Ivana ; Zajonc, Dirk M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5433-d6af741e713909085813818e1fe606a718c575c62d9fb2dc8e0d3487c04ab6193</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>ALIGNMENT</topic><topic>Animals</topic><topic>CD155</topic><topic>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</topic><topic>CRYSTAL STRUCTURE</topic><topic>Crystallography, X-Ray</topic><topic>cytomegalovirus</topic><topic>Cytomegalovirus - chemistry</topic><topic>Cytomegalovirus - genetics</topic><topic>Cytomegalovirus - immunology</topic><topic>DIMERIZATION</topic><topic>Evolution, Molecular</topic><topic>Humans</topic><topic>immune modulators</topic><topic>Immunoglobulins - chemistry</topic><topic>Immunoglobulins - genetics</topic><topic>Immunologic Factors - chemistry</topic><topic>Immunologic Factors - genetics</topic><topic>INTERACTIONS</topic><topic>INTERFACES</topic><topic>Killer Cells, Natural - chemistry</topic><topic>Killer Cells, Natural - immunology</topic><topic>Killer Cells, Natural - metabolism</topic><topic>LIGANDS</topic><topic>Membrane Glycoproteins - chemistry</topic><topic>Membrane Glycoproteins - genetics</topic><topic>Membrane Glycoproteins - immunology</topic><topic>Mutation</topic><topic>Protein Binding - genetics</topic><topic>Protein Binding - immunology</topic><topic>Protein Folding</topic><topic>RECEPTORS</topic><topic>Receptors, TNF-Related Apoptosis-Inducing Ligand - chemistry</topic><topic>Receptors, TNF-Related Apoptosis-Inducing Ligand - genetics</topic><topic>Receptors, Virus - chemistry</topic><topic>Receptors, Virus - genetics</topic><topic>Research Papers</topic><topic>RESOLUTION</topic><topic>Sf9 Cells</topic><topic>Signal Transduction - genetics</topic><topic>Signal Transduction - immunology</topic><topic>Spodoptera - genetics</topic><topic>SURFACES</topic><topic>TRAIL-R2</topic><topic>UL141</topic><topic>Viral Proteins - chemistry</topic><topic>Viral Proteins - genetics</topic><topic>Viral Proteins - immunology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nemčovičová, Ivana</creatorcontrib><creatorcontrib>Zajonc, Dirk M.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Aerospace Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nemčovičová, Ivana</au><au>Zajonc, Dirk M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The structure of cytomegalovirus immune modulator UL141 highlights structural Ig-fold versatility for receptor binding</atitle><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle><addtitle>Acta Crystallographica D</addtitle><date>2014-03</date><risdate>2014</risdate><volume>70</volume><issue>3</issue><spage>851</spage><epage>862</epage><pages>851-862</pages><issn>1399-0047</issn><issn>0907-4449</issn><eissn>1399-0047</eissn><abstract>Natural killer (NK) cells are critical components of the innate immune system as they rapidly detect and destroy infected cells. To avoid immune recognition and to allow long‐term persistence in the host, Human cytomegalovirus (HCMV) has evolved a number of genes to evade or inhibit immune effector pathways. In particular, UL141 can inhibit cell‐surface expression of both the NK cell‐activating ligand CD155 as well as the TRAIL death receptors (TRAIL‐R1 and TRAIL‐R2). The crystal structure of unliganded HCMV UL141 refined to 3.25 Å resolution allowed analysis of its head‐to‐tail dimerization interface. A `dimerization‐deficient' mutant of UL141 (ddUL141) was further designed, which retained the ability to bind to TRAIL‐R2 or CD155 while losing the ability to cross‐link two receptor monomers. Structural comparison of unliganded UL141 with UL141 bound to TRAIL‐R2 further identified a mobile loop that makes intimate contacts with TRAIL‐R2 upon receptor engagement. Superposition of the Ig‐like domain of UL141 on the CD155 ligand T‐cell immunoreceptor with Ig and ITIM domains (TIGIT) revealed that UL141 can potentially engage CD155 similar to TIGIT by using the C′C′′ and GF loops. Further mutations in the TIGIT binding site of CD155 (Q63R and F128R) abrogated UL141 binding, suggesting that the Ig‐like domain of UL141 is a viral mimic of TIGIT, as it targets the same binding site on CD155 using similar `lock‐and‐key' interactions. Sequence alignment of the UL141 gene and its orthologues also showed conservation in this highly hydrophobic (L/A)X6G `lock' motif for CD155 binding as well as conservation of the TRAIL‐R2 binding patches, suggesting that these host–receptor interactions are evolutionary conserved.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>24598754</pmid><doi>10.1107/S1399004713033750</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | ALIGNMENT Animals CD155 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY CRYSTAL STRUCTURE Crystallography, X-Ray cytomegalovirus Cytomegalovirus - chemistry Cytomegalovirus - genetics Cytomegalovirus - immunology DIMERIZATION Evolution, Molecular Humans immune modulators Immunoglobulins - chemistry Immunoglobulins - genetics Immunologic Factors - chemistry Immunologic Factors - genetics INTERACTIONS INTERFACES Killer Cells, Natural - chemistry Killer Cells, Natural - immunology Killer Cells, Natural - metabolism LIGANDS Membrane Glycoproteins - chemistry Membrane Glycoproteins - genetics Membrane Glycoproteins - immunology Mutation Protein Binding - genetics Protein Binding - immunology Protein Folding RECEPTORS Receptors, TNF-Related Apoptosis-Inducing Ligand - chemistry Receptors, TNF-Related Apoptosis-Inducing Ligand - genetics Receptors, Virus - chemistry Receptors, Virus - genetics Research Papers RESOLUTION Sf9 Cells Signal Transduction - genetics Signal Transduction - immunology Spodoptera - genetics SURFACES TRAIL-R2 UL141 Viral Proteins - chemistry Viral Proteins - genetics Viral Proteins - immunology |
title | The structure of cytomegalovirus immune modulator UL141 highlights structural Ig-fold versatility for receptor binding |
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