The locust genome provides insight into swarm formation and long-distance flight
Locusts are one of the world’s most destructive agricultural pests and represent a useful model system in entomology. Here we present a draft 6.5 Gb genome sequence of Locusta migratoria , which is the largest animal genome sequenced so far. Our findings indicate that the large genome size of L. mig...
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Veröffentlicht in: | Nature communications 2014-01, Vol.5 (1), p.2957-2957, Article 2957 |
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creator | Wang, Xianhui Fang, Xiaodong Yang, Pengcheng Jiang, Xuanting Jiang, Feng Zhao, Dejian Li, Bolei Cui, Feng Wei, Jianing Ma, Chuan Wang, Yundan He, Jing Luo, Yuan Wang, Zhifeng Guo, Xiaojiao Guo, Wei Wang, Xuesong Zhang, Yi Yang, Meiling Hao, Shuguang Chen, Bing Ma, Zongyuan Yu, Dan Xiong, Zhiqiang Zhu, Yabing Fan, Dingding Han, Lijuan Wang, Bo Chen, Yuanxin Wang, Junwen Yang, Lan Zhao, Wei Feng, Yue Chen, Guanxing Lian, Jinmin Li, Qiye Huang, Zhiyong Yao, Xiaoming Lv, Na Zhang, Guojie Li, Yingrui Wang, Jian Wang, Jun Zhu, Baoli Kang, Le |
description | Locusts are one of the world’s most destructive agricultural pests and represent a useful model system in entomology. Here we present a draft 6.5 Gb genome sequence of
Locusta migratoria
, which is the largest animal genome sequenced so far. Our findings indicate that the large genome size of
L. migratoria
is likely to be because of transposable element proliferation combined with slow rates of loss for these elements. Methylome and transcriptome analyses reveal complex regulatory mechanisms involved in microtubule dynamic-mediated synapse plasticity during phase change. We find significant expansion of gene families associated with energy consumption and detoxification, consistent with long-distance flight capacity and phytophagy. We report hundreds of potential insecticide target genes, including cys-loop ligand-gated ion channels, G-protein-coupled receptors and lethal genes. The
L. migratoria
genome sequence offers new insights into the biology and sustainable management of this pest species, and will promote its wide use as a model system.
Locusts are destructive agricultural pests and serve as a model organism for studies of insects. Here, the authors report a draft genome sequence of the migratory locust,
Locusta migratoria
, and provide insight into genes associated with key survival traits such as phase-change, long-distance migration and feeding. |
doi_str_mv | 10.1038/ncomms3957 |
format | Article |
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Locusta migratoria
, which is the largest animal genome sequenced so far. Our findings indicate that the large genome size of
L. migratoria
is likely to be because of transposable element proliferation combined with slow rates of loss for these elements. Methylome and transcriptome analyses reveal complex regulatory mechanisms involved in microtubule dynamic-mediated synapse plasticity during phase change. We find significant expansion of gene families associated with energy consumption and detoxification, consistent with long-distance flight capacity and phytophagy. We report hundreds of potential insecticide target genes, including cys-loop ligand-gated ion channels, G-protein-coupled receptors and lethal genes. The
L. migratoria
genome sequence offers new insights into the biology and sustainable management of this pest species, and will promote its wide use as a model system.
Locusts are destructive agricultural pests and serve as a model organism for studies of insects. Here, the authors report a draft genome sequence of the migratory locust,
Locusta migratoria
, and provide insight into genes associated with key survival traits such as phase-change, long-distance migration and feeding.</description><identifier>ISSN: 2041-1723</identifier><identifier>EISSN: 2041-1723</identifier><identifier>DOI: 10.1038/ncomms3957</identifier><identifier>PMID: 24423660</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>38 ; 38/39 ; 45 ; 45/23 ; 45/91 ; 631/181 ; 631/208/212 ; 631/601/1466 ; Animals ; DNA Transposable Elements ; Energy consumption ; Energy Metabolism ; Flight, Animal ; Gene Expression Profiling ; Gene Expression Regulation ; Genes ; Genome, Insect - genetics ; Genomes ; Humanities and Social Sciences ; Locusta migratoria - genetics ; Morphology ; multidisciplinary ; Science ; Science (multidisciplinary)</subject><ispartof>Nature communications, 2014-01, Vol.5 (1), p.2957-2957, Article 2957</ispartof><rights>The Author(s) 2014</rights><rights>Copyright Nature Publishing Group Jan 2014</rights><rights>Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2014 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-7b7cacd98ed6f3b189abaed45cb5f22384cd76eece0194315c182096d026106a3</citedby><cites>FETCH-LOGICAL-c442t-7b7cacd98ed6f3b189abaed45cb5f22384cd76eece0194315c182096d026106a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3896762/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3896762/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,887,27931,27932,41127,42196,51583,53798,53800</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24423660$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Xianhui</creatorcontrib><creatorcontrib>Fang, Xiaodong</creatorcontrib><creatorcontrib>Yang, Pengcheng</creatorcontrib><creatorcontrib>Jiang, Xuanting</creatorcontrib><creatorcontrib>Jiang, Feng</creatorcontrib><creatorcontrib>Zhao, Dejian</creatorcontrib><creatorcontrib>Li, Bolei</creatorcontrib><creatorcontrib>Cui, Feng</creatorcontrib><creatorcontrib>Wei, Jianing</creatorcontrib><creatorcontrib>Ma, Chuan</creatorcontrib><creatorcontrib>Wang, Yundan</creatorcontrib><creatorcontrib>He, Jing</creatorcontrib><creatorcontrib>Luo, Yuan</creatorcontrib><creatorcontrib>Wang, Zhifeng</creatorcontrib><creatorcontrib>Guo, Xiaojiao</creatorcontrib><creatorcontrib>Guo, Wei</creatorcontrib><creatorcontrib>Wang, Xuesong</creatorcontrib><creatorcontrib>Zhang, Yi</creatorcontrib><creatorcontrib>Yang, Meiling</creatorcontrib><creatorcontrib>Hao, Shuguang</creatorcontrib><creatorcontrib>Chen, Bing</creatorcontrib><creatorcontrib>Ma, Zongyuan</creatorcontrib><creatorcontrib>Yu, Dan</creatorcontrib><creatorcontrib>Xiong, Zhiqiang</creatorcontrib><creatorcontrib>Zhu, Yabing</creatorcontrib><creatorcontrib>Fan, Dingding</creatorcontrib><creatorcontrib>Han, Lijuan</creatorcontrib><creatorcontrib>Wang, Bo</creatorcontrib><creatorcontrib>Chen, Yuanxin</creatorcontrib><creatorcontrib>Wang, Junwen</creatorcontrib><creatorcontrib>Yang, Lan</creatorcontrib><creatorcontrib>Zhao, Wei</creatorcontrib><creatorcontrib>Feng, Yue</creatorcontrib><creatorcontrib>Chen, Guanxing</creatorcontrib><creatorcontrib>Lian, Jinmin</creatorcontrib><creatorcontrib>Li, Qiye</creatorcontrib><creatorcontrib>Huang, Zhiyong</creatorcontrib><creatorcontrib>Yao, Xiaoming</creatorcontrib><creatorcontrib>Lv, Na</creatorcontrib><creatorcontrib>Zhang, Guojie</creatorcontrib><creatorcontrib>Li, Yingrui</creatorcontrib><creatorcontrib>Wang, Jian</creatorcontrib><creatorcontrib>Wang, Jun</creatorcontrib><creatorcontrib>Zhu, Baoli</creatorcontrib><creatorcontrib>Kang, Le</creatorcontrib><title>The locust genome provides insight into swarm formation and long-distance flight</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><addtitle>Nat Commun</addtitle><description>Locusts are one of the world’s most destructive agricultural pests and represent a useful model system in entomology. Here we present a draft 6.5 Gb genome sequence of
Locusta migratoria
, which is the largest animal genome sequenced so far. Our findings indicate that the large genome size of
L. migratoria
is likely to be because of transposable element proliferation combined with slow rates of loss for these elements. Methylome and transcriptome analyses reveal complex regulatory mechanisms involved in microtubule dynamic-mediated synapse plasticity during phase change. We find significant expansion of gene families associated with energy consumption and detoxification, consistent with long-distance flight capacity and phytophagy. We report hundreds of potential insecticide target genes, including cys-loop ligand-gated ion channels, G-protein-coupled receptors and lethal genes. The
L. migratoria
genome sequence offers new insights into the biology and sustainable management of this pest species, and will promote its wide use as a model system.
Locusts are destructive agricultural pests and serve as a model organism for studies of insects. Here, the authors report a draft genome sequence of the migratory locust,
Locusta migratoria
, and provide insight into genes associated with key survival traits such as phase-change, long-distance migration and feeding.</description><subject>38</subject><subject>38/39</subject><subject>45</subject><subject>45/23</subject><subject>45/91</subject><subject>631/181</subject><subject>631/208/212</subject><subject>631/601/1466</subject><subject>Animals</subject><subject>DNA Transposable Elements</subject><subject>Energy consumption</subject><subject>Energy Metabolism</subject><subject>Flight, Animal</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation</subject><subject>Genes</subject><subject>Genome, Insect - genetics</subject><subject>Genomes</subject><subject>Humanities and Social Sciences</subject><subject>Locusta migratoria - genetics</subject><subject>Morphology</subject><subject>multidisciplinary</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><issn>2041-1723</issn><issn>2041-1723</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNplkctO3DAUhq0K1EEwmz4AisQGUQV8ixNvKlWoNwkJFtO15dgnGY8Se7ATKt6-RgN0KN4cS-c7_7n8CH0i-JJg1lx5E8YxMVnVH9ARxZyUpKbsYO-_QMuUNjg_JknD-Ue0oJxTJgQ-QnerNRRDMHOaih58GKHYxvDgLKTC-eT69ZTjFIr0R8ex6EIc9eSCL7S3uc73pXVp0t5A0Q1P9Ak67PSQYPkcj9Hv799W1z_Lm9sfv66_3pQm957Kuq2NNlY2YEXHWtJI3WqwvDJt1VHKGm5sLQAMYCI5I5UhDcVSWEwFwUKzY_Rlp7ud2xGsAT9FPahtdKOOjypop95mvFurPjwo1khRC5oFzp8FYrifIU1qdMnAMGgPYU6KcIlrghtcZfTsP3QT5ujzepmq84kx5TJTFzvKxJBShO51GILVk1fqn1cZPt0f_xV9cSYDn3dAyinfQ9zr-V7uLyduoFU</recordid><startdate>20140101</startdate><enddate>20140101</enddate><creator>Wang, Xianhui</creator><creator>Fang, Xiaodong</creator><creator>Yang, Pengcheng</creator><creator>Jiang, Xuanting</creator><creator>Jiang, Feng</creator><creator>Zhao, Dejian</creator><creator>Li, Bolei</creator><creator>Cui, Feng</creator><creator>Wei, Jianing</creator><creator>Ma, Chuan</creator><creator>Wang, Yundan</creator><creator>He, Jing</creator><creator>Luo, Yuan</creator><creator>Wang, Zhifeng</creator><creator>Guo, Xiaojiao</creator><creator>Guo, Wei</creator><creator>Wang, Xuesong</creator><creator>Zhang, Yi</creator><creator>Yang, Meiling</creator><creator>Hao, Shuguang</creator><creator>Chen, Bing</creator><creator>Ma, Zongyuan</creator><creator>Yu, Dan</creator><creator>Xiong, Zhiqiang</creator><creator>Zhu, Yabing</creator><creator>Fan, Dingding</creator><creator>Han, Lijuan</creator><creator>Wang, Bo</creator><creator>Chen, Yuanxin</creator><creator>Wang, Junwen</creator><creator>Yang, Lan</creator><creator>Zhao, Wei</creator><creator>Feng, Yue</creator><creator>Chen, Guanxing</creator><creator>Lian, Jinmin</creator><creator>Li, Qiye</creator><creator>Huang, Zhiyong</creator><creator>Yao, Xiaoming</creator><creator>Lv, Na</creator><creator>Zhang, Guojie</creator><creator>Li, Yingrui</creator><creator>Wang, Jian</creator><creator>Wang, Jun</creator><creator>Zhu, Baoli</creator><creator>Kang, Le</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><general>Nature Pub. 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Le</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-7b7cacd98ed6f3b189abaed45cb5f22384cd76eece0194315c182096d026106a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>38</topic><topic>38/39</topic><topic>45</topic><topic>45/23</topic><topic>45/91</topic><topic>631/181</topic><topic>631/208/212</topic><topic>631/601/1466</topic><topic>Animals</topic><topic>DNA Transposable Elements</topic><topic>Energy consumption</topic><topic>Energy Metabolism</topic><topic>Flight, Animal</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation</topic><topic>Genes</topic><topic>Genome, Insect - genetics</topic><topic>Genomes</topic><topic>Humanities and Social Sciences</topic><topic>Locusta migratoria - genetics</topic><topic>Morphology</topic><topic>multidisciplinary</topic><topic>Science</topic><topic>Science 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Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Advanced Technologies & Aerospace Database</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Xianhui</au><au>Fang, Xiaodong</au><au>Yang, Pengcheng</au><au>Jiang, Xuanting</au><au>Jiang, Feng</au><au>Zhao, Dejian</au><au>Li, Bolei</au><au>Cui, Feng</au><au>Wei, Jianing</au><au>Ma, Chuan</au><au>Wang, Yundan</au><au>He, Jing</au><au>Luo, Yuan</au><au>Wang, Zhifeng</au><au>Guo, Xiaojiao</au><au>Guo, Wei</au><au>Wang, Xuesong</au><au>Zhang, Yi</au><au>Yang, Meiling</au><au>Hao, Shuguang</au><au>Chen, Bing</au><au>Ma, Zongyuan</au><au>Yu, Dan</au><au>Xiong, Zhiqiang</au><au>Zhu, Yabing</au><au>Fan, Dingding</au><au>Han, Lijuan</au><au>Wang, Bo</au><au>Chen, Yuanxin</au><au>Wang, Junwen</au><au>Yang, Lan</au><au>Zhao, Wei</au><au>Feng, Yue</au><au>Chen, Guanxing</au><au>Lian, Jinmin</au><au>Li, Qiye</au><au>Huang, Zhiyong</au><au>Yao, Xiaoming</au><au>Lv, Na</au><au>Zhang, Guojie</au><au>Li, Yingrui</au><au>Wang, Jian</au><au>Wang, Jun</au><au>Zhu, Baoli</au><au>Kang, Le</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The locust genome provides insight into swarm formation and long-distance flight</atitle><jtitle>Nature communications</jtitle><stitle>Nat Commun</stitle><addtitle>Nat Commun</addtitle><date>2014-01-01</date><risdate>2014</risdate><volume>5</volume><issue>1</issue><spage>2957</spage><epage>2957</epage><pages>2957-2957</pages><artnum>2957</artnum><issn>2041-1723</issn><eissn>2041-1723</eissn><abstract>Locusts are one of the world’s most destructive agricultural pests and represent a useful model system in entomology. Here we present a draft 6.5 Gb genome sequence of
Locusta migratoria
, which is the largest animal genome sequenced so far. Our findings indicate that the large genome size of
L. migratoria
is likely to be because of transposable element proliferation combined with slow rates of loss for these elements. Methylome and transcriptome analyses reveal complex regulatory mechanisms involved in microtubule dynamic-mediated synapse plasticity during phase change. We find significant expansion of gene families associated with energy consumption and detoxification, consistent with long-distance flight capacity and phytophagy. We report hundreds of potential insecticide target genes, including cys-loop ligand-gated ion channels, G-protein-coupled receptors and lethal genes. The
L. migratoria
genome sequence offers new insights into the biology and sustainable management of this pest species, and will promote its wide use as a model system.
Locusts are destructive agricultural pests and serve as a model organism for studies of insects. Here, the authors report a draft genome sequence of the migratory locust,
Locusta migratoria
, and provide insight into genes associated with key survival traits such as phase-change, long-distance migration and feeding.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>24423660</pmid><doi>10.1038/ncomms3957</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2041-1723 |
ispartof | Nature communications, 2014-01, Vol.5 (1), p.2957-2957, Article 2957 |
issn | 2041-1723 2041-1723 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3896762 |
source | Nature Open Access; MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Alma/SFX Local Collection; Springer Nature OA/Free Journals |
subjects | 38 38/39 45 45/23 45/91 631/181 631/208/212 631/601/1466 Animals DNA Transposable Elements Energy consumption Energy Metabolism Flight, Animal Gene Expression Profiling Gene Expression Regulation Genes Genome, Insect - genetics Genomes Humanities and Social Sciences Locusta migratoria - genetics Morphology multidisciplinary Science Science (multidisciplinary) |
title | The locust genome provides insight into swarm formation and long-distance flight |
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