A stem cell-like gene expression signature associates with inferior outcomes and a distinct microRNA expression profile in adults with primary cytogenetically normal acute myeloid leukemia

Acute myeloid leukemia (AML) is hypothesized to be sustained by self-renewing leukemia stem cells (LSCs). Recently, gene expression signatures (GES) from functionally defined AML LSC populations were reported, and expression of a ‘core enriched’ (CE) GES, representing 44 genes activated in LCSs, con...

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Veröffentlicht in:Leukemia 2013-10, Vol.27 (10), p.2023-2031
Hauptverfasser: Metzeler, K H, Maharry, K, Kohlschmidt, J, Volinia, S, Mrózek, K, Becker, H, Nicolet, D, Whitman, S P, Mendler, J H, Schwind, S, Eisfeld, A-K, Wu, Y-Z, Powell, B L, Carter, T H, Wetzler, M, Kolitz, J E, Baer, M R, Carroll, A J, Stone, R M, Caligiuri, M A, Marcucci, G, Bloomfield, C D
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container_issue 10
container_start_page 2023
container_title Leukemia
container_volume 27
creator Metzeler, K H
Maharry, K
Kohlschmidt, J
Volinia, S
Mrózek, K
Becker, H
Nicolet, D
Whitman, S P
Mendler, J H
Schwind, S
Eisfeld, A-K
Wu, Y-Z
Powell, B L
Carter, T H
Wetzler, M
Kolitz, J E
Baer, M R
Carroll, A J
Stone, R M
Caligiuri, M A
Marcucci, G
Bloomfield, C D
description Acute myeloid leukemia (AML) is hypothesized to be sustained by self-renewing leukemia stem cells (LSCs). Recently, gene expression signatures (GES) from functionally defined AML LSC populations were reported, and expression of a ‘core enriched’ (CE) GES, representing 44 genes activated in LCSs, conferred shorter survival in cytogenetically normal (CN) AML. The prognostic impact of the CE GES in the context of other molecular markers, including gene mutations and microRNA (miR) expression alterations, is unknown and its clinical utility is unclear. We studied associations of the CE GES with known molecular prognosticators, miR expression profiles, and outcomes in 364 well-characterized CN-AML patients. A high CE score (CE high ) associated with FLT3 -internal tandem duplication, WT1 and RUNX1 mutations, wild-type CEBPA and TET2 , and high ERG , BAALC and miR-155 expression. CE high patients had a lower complete remission (CR) rate ( P =0.003) and shorter disease-free (DFS, P
doi_str_mv 10.1038/leu.2013.181
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Recently, gene expression signatures (GES) from functionally defined AML LSC populations were reported, and expression of a ‘core enriched’ (CE) GES, representing 44 genes activated in LCSs, conferred shorter survival in cytogenetically normal (CN) AML. The prognostic impact of the CE GES in the context of other molecular markers, including gene mutations and microRNA (miR) expression alterations, is unknown and its clinical utility is unclear. We studied associations of the CE GES with known molecular prognosticators, miR expression profiles, and outcomes in 364 well-characterized CN-AML patients. A high CE score (CE high ) associated with FLT3 -internal tandem duplication, WT1 and RUNX1 mutations, wild-type CEBPA and TET2 , and high ERG , BAALC and miR-155 expression. CE high patients had a lower complete remission (CR) rate ( P =0.003) and shorter disease-free (DFS, P &lt;0.001) and overall survival (OS, P &lt;0.001) than CE low patients. These associations persisted in multivariable analyses adjusting for other prognosticators (CR, P =0.02; DFS, P &lt;0.001; and OS, P &lt;0.001). CE high status was accompanied by a characteristic miR expression signature. Fifteen miRs were upregulated in both younger and older CE high patients, including miRs relevant for stem cell function. Our results support the clinical relevance of LSCs and improve risk stratification in AML.</description><identifier>ISSN: 0887-6924</identifier><identifier>EISSN: 1476-5551</identifier><identifier>DOI: 10.1038/leu.2013.181</identifier><identifier>PMID: 23765227</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/208/191/2018 ; 631/337/384/331 ; 692/699/67/1990/283/1897 ; 692/699/67/71 ; Acute myeloid leukemia ; Adolescent ; Adult ; Aged ; Aged, 80 and over ; Biomarkers, Tumor - genetics ; Cancer ; Cancer Research ; Clinical trials ; Critical Care Medicine ; Cytogenetic Analysis ; Female ; Gene expression ; Genetic aspects ; Health aspects ; Hematology ; Humans ; Intensive ; Internal Medicine ; Kinases ; Leukemia ; Leukemia, Myeloid, Acute - genetics ; Leukemia, Myeloid, Acute - mortality ; Leukemia, Myeloid, Acute - therapy ; Male ; Medicine ; Medicine &amp; Public Health ; MicroRNA ; MicroRNAs ; MicroRNAs - genetics ; Middle Aged ; miRNA ; Mutation ; Oligonucleotide Array Sequence Analysis ; Oncology ; original-article ; Patients ; Physiological aspects ; Prognosis ; Remission ; Remission (Medicine) ; Remission Induction ; Ribonucleic acid ; RNA ; RNA sequencing ; Runx1 protein ; Stem cells ; Stem Cells - metabolism ; Stem Cells - pathology ; Survival ; Survival Rate ; Transcriptome ; Young Adult</subject><ispartof>Leukemia, 2013-10, Vol.27 (10), p.2023-2031</ispartof><rights>Macmillan Publishers Limited 2013</rights><rights>COPYRIGHT 2013 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Oct 2013</rights><rights>Macmillan Publishers Limited 2013.</rights><rights>2013 Macmillan Publishers Limited All rights reserved 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c609t-e51e98690524a4d819f44317d349cece7dbbf873d1e62a1c82f6101b5b36f6123</citedby><cites>FETCH-LOGICAL-c609t-e51e98690524a4d819f44317d349cece7dbbf873d1e62a1c82f6101b5b36f6123</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/leu.2013.181$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/leu.2013.181$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23765227$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Metzeler, K H</creatorcontrib><creatorcontrib>Maharry, K</creatorcontrib><creatorcontrib>Kohlschmidt, J</creatorcontrib><creatorcontrib>Volinia, S</creatorcontrib><creatorcontrib>Mrózek, K</creatorcontrib><creatorcontrib>Becker, H</creatorcontrib><creatorcontrib>Nicolet, D</creatorcontrib><creatorcontrib>Whitman, S P</creatorcontrib><creatorcontrib>Mendler, J H</creatorcontrib><creatorcontrib>Schwind, S</creatorcontrib><creatorcontrib>Eisfeld, A-K</creatorcontrib><creatorcontrib>Wu, Y-Z</creatorcontrib><creatorcontrib>Powell, B L</creatorcontrib><creatorcontrib>Carter, T H</creatorcontrib><creatorcontrib>Wetzler, M</creatorcontrib><creatorcontrib>Kolitz, J E</creatorcontrib><creatorcontrib>Baer, M R</creatorcontrib><creatorcontrib>Carroll, A J</creatorcontrib><creatorcontrib>Stone, R M</creatorcontrib><creatorcontrib>Caligiuri, M A</creatorcontrib><creatorcontrib>Marcucci, G</creatorcontrib><creatorcontrib>Bloomfield, C D</creatorcontrib><title>A stem cell-like gene expression signature associates with inferior outcomes and a distinct microRNA expression profile in adults with primary cytogenetically normal acute myeloid leukemia</title><title>Leukemia</title><addtitle>Leukemia</addtitle><addtitle>Leukemia</addtitle><description>Acute myeloid leukemia (AML) is hypothesized to be sustained by self-renewing leukemia stem cells (LSCs). Recently, gene expression signatures (GES) from functionally defined AML LSC populations were reported, and expression of a ‘core enriched’ (CE) GES, representing 44 genes activated in LCSs, conferred shorter survival in cytogenetically normal (CN) AML. The prognostic impact of the CE GES in the context of other molecular markers, including gene mutations and microRNA (miR) expression alterations, is unknown and its clinical utility is unclear. We studied associations of the CE GES with known molecular prognosticators, miR expression profiles, and outcomes in 364 well-characterized CN-AML patients. A high CE score (CE high ) associated with FLT3 -internal tandem duplication, WT1 and RUNX1 mutations, wild-type CEBPA and TET2 , and high ERG , BAALC and miR-155 expression. CE high patients had a lower complete remission (CR) rate ( P =0.003) and shorter disease-free (DFS, P &lt;0.001) and overall survival (OS, P &lt;0.001) than CE low patients. These associations persisted in multivariable analyses adjusting for other prognosticators (CR, P =0.02; DFS, P &lt;0.001; and OS, P &lt;0.001). CE high status was accompanied by a characteristic miR expression signature. Fifteen miRs were upregulated in both younger and older CE high patients, including miRs relevant for stem cell function. Our results support the clinical relevance of LSCs and improve risk stratification in AML.</description><subject>631/208/191/2018</subject><subject>631/337/384/331</subject><subject>692/699/67/1990/283/1897</subject><subject>692/699/67/71</subject><subject>Acute myeloid leukemia</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Biomarkers, Tumor - genetics</subject><subject>Cancer</subject><subject>Cancer Research</subject><subject>Clinical trials</subject><subject>Critical Care Medicine</subject><subject>Cytogenetic Analysis</subject><subject>Female</subject><subject>Gene expression</subject><subject>Genetic aspects</subject><subject>Health aspects</subject><subject>Hematology</subject><subject>Humans</subject><subject>Intensive</subject><subject>Internal Medicine</subject><subject>Kinases</subject><subject>Leukemia</subject><subject>Leukemia, Myeloid, Acute - genetics</subject><subject>Leukemia, Myeloid, Acute - mortality</subject><subject>Leukemia, Myeloid, Acute - therapy</subject><subject>Male</subject><subject>Medicine</subject><subject>Medicine &amp; Public Health</subject><subject>MicroRNA</subject><subject>MicroRNAs</subject><subject>MicroRNAs - genetics</subject><subject>Middle Aged</subject><subject>miRNA</subject><subject>Mutation</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Oncology</subject><subject>original-article</subject><subject>Patients</subject><subject>Physiological aspects</subject><subject>Prognosis</subject><subject>Remission</subject><subject>Remission (Medicine)</subject><subject>Remission Induction</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA sequencing</subject><subject>Runx1 protein</subject><subject>Stem cells</subject><subject>Stem Cells - metabolism</subject><subject>Stem Cells - pathology</subject><subject>Survival</subject><subject>Survival Rate</subject><subject>Transcriptome</subject><subject>Young Adult</subject><issn>0887-6924</issn><issn>1476-5551</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkl-L1DAUxYso7rr65rMEBPHBjkmTJumLMCz-g0VB9Dlk0tuZ7KbJmKTqfDc_nCkzrrOyiPShpfeXk3vvOVX1mOAFwVS-dDAtGkzogkhypzolTPC6bVtytzrFUoqadw07qR6kdInxXOT3q5OGCt42jTitfi5RyjAiA87Vzl4BWoMHBD-2EVKywaNk117nKQLSKQVjdYaEvtu8QdYPEG2IKEzZhLH81r5HGvU2ZetNRqM1MXz6sDyW28YwWAflMNL95PJBaxvtqOMOmV0OcwfZGu3cDvkQR-2QNlMGNO7ABdujMvIVjFY_rO4N2iV4dHifVV_evP58_q6--Pj2_fnyojYcd7mGlkAneYfbhmnWS9INjFEieso6AwZEv1oNUtCeAG80MbIZOMFk1a4oL18NPate7XW302qE3oDPUTt16FkFbdXNircbtQ7fFJUdFkwUgecHgRi-TpCyGm2aV649hCkpUvphhGPJ_wst7mFBC_r0L_QyTNGXTaiGs1ZQ3uJ_UkULNx2WlP2h1tqBKs6GMoiZr1bLsiZCGBayUItbqPL0xQ4TPMzW3jzw7OjABrTLmxTclEsU0k3wxR4siUkpwnC9XYLVnHNVTFdzzlXJecGfHDtyDf8OdgHqPZBKya8hHk19m-Avb80Jxg</recordid><startdate>20131001</startdate><enddate>20131001</enddate><creator>Metzeler, K H</creator><creator>Maharry, K</creator><creator>Kohlschmidt, J</creator><creator>Volinia, S</creator><creator>Mrózek, K</creator><creator>Becker, H</creator><creator>Nicolet, D</creator><creator>Whitman, S P</creator><creator>Mendler, J H</creator><creator>Schwind, S</creator><creator>Eisfeld, A-K</creator><creator>Wu, Y-Z</creator><creator>Powell, B L</creator><creator>Carter, T H</creator><creator>Wetzler, M</creator><creator>Kolitz, J E</creator><creator>Baer, M R</creator><creator>Carroll, A J</creator><creator>Stone, R M</creator><creator>Caligiuri, M A</creator><creator>Marcucci, G</creator><creator>Bloomfield, C D</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7RV</scope><scope>7T5</scope><scope>7T7</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20131001</creationdate><title>A stem cell-like gene expression signature associates with inferior outcomes and a distinct microRNA expression profile in adults with primary cytogenetically normal acute myeloid leukemia</title><author>Metzeler, K H ; 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Medical Complete (Alumni)</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Biological Sciences</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Leukemia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Metzeler, K H</au><au>Maharry, K</au><au>Kohlschmidt, J</au><au>Volinia, S</au><au>Mrózek, K</au><au>Becker, H</au><au>Nicolet, D</au><au>Whitman, S P</au><au>Mendler, J H</au><au>Schwind, S</au><au>Eisfeld, A-K</au><au>Wu, Y-Z</au><au>Powell, B L</au><au>Carter, T H</au><au>Wetzler, M</au><au>Kolitz, J E</au><au>Baer, M R</au><au>Carroll, A J</au><au>Stone, R M</au><au>Caligiuri, M A</au><au>Marcucci, G</au><au>Bloomfield, C D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A stem cell-like gene expression signature associates with inferior outcomes and a distinct microRNA expression profile in adults with primary cytogenetically normal acute myeloid leukemia</atitle><jtitle>Leukemia</jtitle><stitle>Leukemia</stitle><addtitle>Leukemia</addtitle><date>2013-10-01</date><risdate>2013</risdate><volume>27</volume><issue>10</issue><spage>2023</spage><epage>2031</epage><pages>2023-2031</pages><issn>0887-6924</issn><eissn>1476-5551</eissn><abstract>Acute myeloid leukemia (AML) is hypothesized to be sustained by self-renewing leukemia stem cells (LSCs). Recently, gene expression signatures (GES) from functionally defined AML LSC populations were reported, and expression of a ‘core enriched’ (CE) GES, representing 44 genes activated in LCSs, conferred shorter survival in cytogenetically normal (CN) AML. The prognostic impact of the CE GES in the context of other molecular markers, including gene mutations and microRNA (miR) expression alterations, is unknown and its clinical utility is unclear. We studied associations of the CE GES with known molecular prognosticators, miR expression profiles, and outcomes in 364 well-characterized CN-AML patients. A high CE score (CE high ) associated with FLT3 -internal tandem duplication, WT1 and RUNX1 mutations, wild-type CEBPA and TET2 , and high ERG , BAALC and miR-155 expression. CE high patients had a lower complete remission (CR) rate ( P =0.003) and shorter disease-free (DFS, P &lt;0.001) and overall survival (OS, P &lt;0.001) than CE low patients. These associations persisted in multivariable analyses adjusting for other prognosticators (CR, P =0.02; DFS, P &lt;0.001; and OS, P &lt;0.001). CE high status was accompanied by a characteristic miR expression signature. Fifteen miRs were upregulated in both younger and older CE high patients, including miRs relevant for stem cell function. Our results support the clinical relevance of LSCs and improve risk stratification in AML.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>23765227</pmid><doi>10.1038/leu.2013.181</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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identifier ISSN: 0887-6924
ispartof Leukemia, 2013-10, Vol.27 (10), p.2023-2031
issn 0887-6924
1476-5551
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3890747
source MEDLINE; SpringerLink Journals; Nature; EZB Electronic Journals Library
subjects 631/208/191/2018
631/337/384/331
692/699/67/1990/283/1897
692/699/67/71
Acute myeloid leukemia
Adolescent
Adult
Aged
Aged, 80 and over
Biomarkers, Tumor - genetics
Cancer
Cancer Research
Clinical trials
Critical Care Medicine
Cytogenetic Analysis
Female
Gene expression
Genetic aspects
Health aspects
Hematology
Humans
Intensive
Internal Medicine
Kinases
Leukemia
Leukemia, Myeloid, Acute - genetics
Leukemia, Myeloid, Acute - mortality
Leukemia, Myeloid, Acute - therapy
Male
Medicine
Medicine & Public Health
MicroRNA
MicroRNAs
MicroRNAs - genetics
Middle Aged
miRNA
Mutation
Oligonucleotide Array Sequence Analysis
Oncology
original-article
Patients
Physiological aspects
Prognosis
Remission
Remission (Medicine)
Remission Induction
Ribonucleic acid
RNA
RNA sequencing
Runx1 protein
Stem cells
Stem Cells - metabolism
Stem Cells - pathology
Survival
Survival Rate
Transcriptome
Young Adult
title A stem cell-like gene expression signature associates with inferior outcomes and a distinct microRNA expression profile in adults with primary cytogenetically normal acute myeloid leukemia
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