Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean

Rhodoliths are free-living coralline algae ( Rhodophyta , Corallinales ) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important sou...

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Veröffentlicht in:The ISME Journal 2014-01, Vol.8 (1), p.52-62
Hauptverfasser: Cavalcanti, Giselle S, Gregoracci, Gustavo B, dos Santos, Eidy O, Silveira, Cynthia B, Meirelles, Pedro M, Longo, Leila, Gotoh, Kazuyoshi, Nakamura, Shota, Iida, Tetsuya, Sawabe, Tomoo, Rezende, Carlos E, Francini-Filho, Ronaldo B, Moura, Rodrigo L, Amado-Filho, Gilberto M, Thompson, Fabiano L
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container_issue 1
container_start_page 52
container_title The ISME Journal
container_volume 8
creator Cavalcanti, Giselle S
Gregoracci, Gustavo B
dos Santos, Eidy O
Silveira, Cynthia B
Meirelles, Pedro M
Longo, Leila
Gotoh, Kazuyoshi
Nakamura, Shota
Iida, Tetsuya
Sawabe, Tomoo
Rezende, Carlos E
Francini-Filho, Ronaldo B
Moura, Rodrigo L
Amado-Filho, Gilberto M
Thompson, Fabiano L
description Rhodoliths are free-living coralline algae ( Rhodophyta , Corallinales ) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important source of calcium carbonate. The Abrolhos Bank, off eastern Brazil, harbors the world’s largest continuous rhodolith bed (of ∼21 000 km 2 ) and has one of the largest marine CaCO 3 deposits (producing 25 megatons of CaCO 3 per year). Nevertheless, there is a lack of information about the microbial diversity, photosynthetic potential and ecological interactions within the rhodolith holobiont. Herein, we performed an ecophysiologic and metagenomic analysis of the Abrolhos rhodoliths to understand their microbial composition and functional components. Rhodoliths contained a specific microbiome that displayed a significant enrichment in aerobic ammonia-oxidizing betaproteobacteria and dissimilative sulfate-reducing deltaproteobacteria. We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m −2 s −1 ), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10 5  tons C per day. This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean.
doi_str_mv 10.1038/ismej.2013.133
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We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m −2 s −1 ), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10 5  tons C per day. 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This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>23985749</pmid><doi>10.1038/ismej.2013.133</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record>
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subjects 631/158/2446
631/326/2565/2142
631/326/2565/855
631/443
Algae
Ammonia
Animals
Archaea - classification
Archaea - genetics
Archaea - metabolism
Archaea - physiology
Aromatic compounds
Atlantic Ocean
Bacteria - classification
Bacteria - genetics
Bacteria - metabolism
Bacterial Physiological Phenomena
Biodiversity
Biomedical and Life Sciences
Brazil
Calcium carbonate
Calcium Carbonate - metabolism
Carbon
Carbon - metabolism
Ecology
Ecosystem
Evolutionary Biology
Fatty acids
Fisheries
Harbors
Invertebrates - physiology
Life Sciences
Marine environment
Metagenome - genetics
Microbial Ecology
Microbial Genetics and Genomics
Microbiology
Mineralization
Original
original-article
Photosynthesis
Photosynthesis - genetics
Rhodophyta - microbiology
Sulfate reduction
Sulfates
Sulfides
title Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean
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