Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean
Rhodoliths are free-living coralline algae ( Rhodophyta , Corallinales ) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important sou...
Gespeichert in:
Veröffentlicht in: | The ISME Journal 2014-01, Vol.8 (1), p.52-62 |
---|---|
Hauptverfasser: | , , , , , , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 62 |
---|---|
container_issue | 1 |
container_start_page | 52 |
container_title | The ISME Journal |
container_volume | 8 |
creator | Cavalcanti, Giselle S Gregoracci, Gustavo B dos Santos, Eidy O Silveira, Cynthia B Meirelles, Pedro M Longo, Leila Gotoh, Kazuyoshi Nakamura, Shota Iida, Tetsuya Sawabe, Tomoo Rezende, Carlos E Francini-Filho, Ronaldo B Moura, Rodrigo L Amado-Filho, Gilberto M Thompson, Fabiano L |
description | Rhodoliths are free-living coralline algae (
Rhodophyta
,
Corallinales
) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important source of calcium carbonate. The Abrolhos Bank, off eastern Brazil, harbors the world’s largest continuous rhodolith bed (of ∼21 000 km
2
) and has one of the largest marine CaCO
3
deposits (producing 25 megatons of CaCO
3
per year). Nevertheless, there is a lack of information about the microbial diversity, photosynthetic potential and ecological interactions within the rhodolith holobiont. Herein, we performed an ecophysiologic and metagenomic analysis of the Abrolhos rhodoliths to understand their microbial composition and functional components. Rhodoliths contained a specific microbiome that displayed a significant enrichment in aerobic ammonia-oxidizing betaproteobacteria and dissimilative sulfate-reducing deltaproteobacteria. We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m
−2
s
−1
), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10
5
tons C per day. This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean. |
doi_str_mv | 10.1038/ismej.2013.133 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3869012</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3158200931</sourcerecordid><originalsourceid>FETCH-LOGICAL-c524t-f9914665e07cc68676fd531395524a30145044f5ca8c26998588357eb487b5423</originalsourceid><addsrcrecordid>eNptkc-L1DAcxYMo7rp69SgBL15mNmmaH70Iy-AvWBhBPYc0_bbN0CZrkgr735vOrMMqnvLjffKSl4fQa0q2lDB17dIMh21FKNtSxp6gSyo53UgmydPzXFQX6EVKB0K4FEI-RxcVaxSXdXOJ4tfxPrkwhcFZbHyHZ8hmAB_mdZ1zdO2SIeHQ4zwCjmPowuTymHAf4uz8cNyeTBwgZbwzuz3DLXTY-aPwLSx5xDd5Mj4Xw70F41-iZ72ZErx6GK_Qj48fvu8-b273n77sbm43lld13vRNQ2shOBBprVBCir7jjLKGF9kwQmtO6rrn1ihbiaYEUopxCW2tZMvril2h9yffu6WdobPgczSTvotuNvFeB-P034p3ox7CL82UaAhdDd49GMTwcyn59OyShamEgbAkXZ7XVFRxzgr69h_0EJboS7yVUmL9elmo7YmyMaQUoT8_hhK91qmPdeq1Tl3qLAfePI5wxv_0V4DrE5CK5AeIj-79v-Vvld2row</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1468600577</pqid></control><display><type>article</type><title>Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean</title><source>Oxford Journals Open Access Collection</source><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><creator>Cavalcanti, Giselle S ; Gregoracci, Gustavo B ; dos Santos, Eidy O ; Silveira, Cynthia B ; Meirelles, Pedro M ; Longo, Leila ; Gotoh, Kazuyoshi ; Nakamura, Shota ; Iida, Tetsuya ; Sawabe, Tomoo ; Rezende, Carlos E ; Francini-Filho, Ronaldo B ; Moura, Rodrigo L ; Amado-Filho, Gilberto M ; Thompson, Fabiano L</creator><creatorcontrib>Cavalcanti, Giselle S ; Gregoracci, Gustavo B ; dos Santos, Eidy O ; Silveira, Cynthia B ; Meirelles, Pedro M ; Longo, Leila ; Gotoh, Kazuyoshi ; Nakamura, Shota ; Iida, Tetsuya ; Sawabe, Tomoo ; Rezende, Carlos E ; Francini-Filho, Ronaldo B ; Moura, Rodrigo L ; Amado-Filho, Gilberto M ; Thompson, Fabiano L</creatorcontrib><description>Rhodoliths are free-living coralline algae (
Rhodophyta
,
Corallinales
) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important source of calcium carbonate. The Abrolhos Bank, off eastern Brazil, harbors the world’s largest continuous rhodolith bed (of ∼21 000 km
2
) and has one of the largest marine CaCO
3
deposits (producing 25 megatons of CaCO
3
per year). Nevertheless, there is a lack of information about the microbial diversity, photosynthetic potential and ecological interactions within the rhodolith holobiont. Herein, we performed an ecophysiologic and metagenomic analysis of the Abrolhos rhodoliths to understand their microbial composition and functional components. Rhodoliths contained a specific microbiome that displayed a significant enrichment in aerobic ammonia-oxidizing betaproteobacteria and dissimilative sulfate-reducing deltaproteobacteria. We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m
−2
s
−1
), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10
5
tons C per day. This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean.</description><identifier>ISSN: 1751-7362</identifier><identifier>EISSN: 1751-7370</identifier><identifier>DOI: 10.1038/ismej.2013.133</identifier><identifier>PMID: 23985749</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/158/2446 ; 631/326/2565/2142 ; 631/326/2565/855 ; 631/443 ; Algae ; Ammonia ; Animals ; Archaea - classification ; Archaea - genetics ; Archaea - metabolism ; Archaea - physiology ; Aromatic compounds ; Atlantic Ocean ; Bacteria - classification ; Bacteria - genetics ; Bacteria - metabolism ; Bacterial Physiological Phenomena ; Biodiversity ; Biomedical and Life Sciences ; Brazil ; Calcium carbonate ; Calcium Carbonate - metabolism ; Carbon ; Carbon - metabolism ; Ecology ; Ecosystem ; Evolutionary Biology ; Fatty acids ; Fisheries ; Harbors ; Invertebrates - physiology ; Life Sciences ; Marine environment ; Metagenome - genetics ; Microbial Ecology ; Microbial Genetics and Genomics ; Microbiology ; Mineralization ; Original ; original-article ; Photosynthesis ; Photosynthesis - genetics ; Rhodophyta - microbiology ; Sulfate reduction ; Sulfates ; Sulfides</subject><ispartof>The ISME Journal, 2014-01, Vol.8 (1), p.52-62</ispartof><rights>International Society for Microbial Ecology 2014</rights><rights>Copyright Nature Publishing Group Jan 2014</rights><rights>Copyright © 2014 International Society for Microbial Ecology 2014 International Society for Microbial Ecology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c524t-f9914665e07cc68676fd531395524a30145044f5ca8c26998588357eb487b5423</citedby><cites>FETCH-LOGICAL-c524t-f9914665e07cc68676fd531395524a30145044f5ca8c26998588357eb487b5423</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869012/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869012/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23985749$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cavalcanti, Giselle S</creatorcontrib><creatorcontrib>Gregoracci, Gustavo B</creatorcontrib><creatorcontrib>dos Santos, Eidy O</creatorcontrib><creatorcontrib>Silveira, Cynthia B</creatorcontrib><creatorcontrib>Meirelles, Pedro M</creatorcontrib><creatorcontrib>Longo, Leila</creatorcontrib><creatorcontrib>Gotoh, Kazuyoshi</creatorcontrib><creatorcontrib>Nakamura, Shota</creatorcontrib><creatorcontrib>Iida, Tetsuya</creatorcontrib><creatorcontrib>Sawabe, Tomoo</creatorcontrib><creatorcontrib>Rezende, Carlos E</creatorcontrib><creatorcontrib>Francini-Filho, Ronaldo B</creatorcontrib><creatorcontrib>Moura, Rodrigo L</creatorcontrib><creatorcontrib>Amado-Filho, Gilberto M</creatorcontrib><creatorcontrib>Thompson, Fabiano L</creatorcontrib><title>Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean</title><title>The ISME Journal</title><addtitle>ISME J</addtitle><addtitle>ISME J</addtitle><description>Rhodoliths are free-living coralline algae (
Rhodophyta
,
Corallinales
) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important source of calcium carbonate. The Abrolhos Bank, off eastern Brazil, harbors the world’s largest continuous rhodolith bed (of ∼21 000 km
2
) and has one of the largest marine CaCO
3
deposits (producing 25 megatons of CaCO
3
per year). Nevertheless, there is a lack of information about the microbial diversity, photosynthetic potential and ecological interactions within the rhodolith holobiont. Herein, we performed an ecophysiologic and metagenomic analysis of the Abrolhos rhodoliths to understand their microbial composition and functional components. Rhodoliths contained a specific microbiome that displayed a significant enrichment in aerobic ammonia-oxidizing betaproteobacteria and dissimilative sulfate-reducing deltaproteobacteria. We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m
−2
s
−1
), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10
5
tons C per day. This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean.</description><subject>631/158/2446</subject><subject>631/326/2565/2142</subject><subject>631/326/2565/855</subject><subject>631/443</subject><subject>Algae</subject><subject>Ammonia</subject><subject>Animals</subject><subject>Archaea - classification</subject><subject>Archaea - genetics</subject><subject>Archaea - metabolism</subject><subject>Archaea - physiology</subject><subject>Aromatic compounds</subject><subject>Atlantic Ocean</subject><subject>Bacteria - classification</subject><subject>Bacteria - genetics</subject><subject>Bacteria - metabolism</subject><subject>Bacterial Physiological Phenomena</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Brazil</subject><subject>Calcium carbonate</subject><subject>Calcium Carbonate - metabolism</subject><subject>Carbon</subject><subject>Carbon - metabolism</subject><subject>Ecology</subject><subject>Ecosystem</subject><subject>Evolutionary Biology</subject><subject>Fatty acids</subject><subject>Fisheries</subject><subject>Harbors</subject><subject>Invertebrates - physiology</subject><subject>Life Sciences</subject><subject>Marine environment</subject><subject>Metagenome - genetics</subject><subject>Microbial Ecology</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Mineralization</subject><subject>Original</subject><subject>original-article</subject><subject>Photosynthesis</subject><subject>Photosynthesis - genetics</subject><subject>Rhodophyta - microbiology</subject><subject>Sulfate reduction</subject><subject>Sulfates</subject><subject>Sulfides</subject><issn>1751-7362</issn><issn>1751-7370</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNptkc-L1DAcxYMo7rp69SgBL15mNmmaH70Iy-AvWBhBPYc0_bbN0CZrkgr735vOrMMqnvLjffKSl4fQa0q2lDB17dIMh21FKNtSxp6gSyo53UgmydPzXFQX6EVKB0K4FEI-RxcVaxSXdXOJ4tfxPrkwhcFZbHyHZ8hmAB_mdZ1zdO2SIeHQ4zwCjmPowuTymHAf4uz8cNyeTBwgZbwzuz3DLXTY-aPwLSx5xDd5Mj4Xw70F41-iZ72ZErx6GK_Qj48fvu8-b273n77sbm43lld13vRNQ2shOBBprVBCir7jjLKGF9kwQmtO6rrn1ihbiaYEUopxCW2tZMvril2h9yffu6WdobPgczSTvotuNvFeB-P034p3ox7CL82UaAhdDd49GMTwcyn59OyShamEgbAkXZ7XVFRxzgr69h_0EJboS7yVUmL9elmo7YmyMaQUoT8_hhK91qmPdeq1Tl3qLAfePI5wxv_0V4DrE5CK5AeIj-79v-Vvld2row</recordid><startdate>20140101</startdate><enddate>20140101</enddate><creator>Cavalcanti, Giselle S</creator><creator>Gregoracci, Gustavo B</creator><creator>dos Santos, Eidy O</creator><creator>Silveira, Cynthia B</creator><creator>Meirelles, Pedro M</creator><creator>Longo, Leila</creator><creator>Gotoh, Kazuyoshi</creator><creator>Nakamura, Shota</creator><creator>Iida, Tetsuya</creator><creator>Sawabe, Tomoo</creator><creator>Rezende, Carlos E</creator><creator>Francini-Filho, Ronaldo B</creator><creator>Moura, Rodrigo L</creator><creator>Amado-Filho, Gilberto M</creator><creator>Thompson, Fabiano L</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20140101</creationdate><title>Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean</title><author>Cavalcanti, Giselle S ; Gregoracci, Gustavo B ; dos Santos, Eidy O ; Silveira, Cynthia B ; Meirelles, Pedro M ; Longo, Leila ; Gotoh, Kazuyoshi ; Nakamura, Shota ; Iida, Tetsuya ; Sawabe, Tomoo ; Rezende, Carlos E ; Francini-Filho, Ronaldo B ; Moura, Rodrigo L ; Amado-Filho, Gilberto M ; Thompson, Fabiano L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c524t-f9914665e07cc68676fd531395524a30145044f5ca8c26998588357eb487b5423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>631/158/2446</topic><topic>631/326/2565/2142</topic><topic>631/326/2565/855</topic><topic>631/443</topic><topic>Algae</topic><topic>Ammonia</topic><topic>Animals</topic><topic>Archaea - classification</topic><topic>Archaea - genetics</topic><topic>Archaea - metabolism</topic><topic>Archaea - physiology</topic><topic>Aromatic compounds</topic><topic>Atlantic Ocean</topic><topic>Bacteria - classification</topic><topic>Bacteria - genetics</topic><topic>Bacteria - metabolism</topic><topic>Bacterial Physiological Phenomena</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Brazil</topic><topic>Calcium carbonate</topic><topic>Calcium Carbonate - metabolism</topic><topic>Carbon</topic><topic>Carbon - metabolism</topic><topic>Ecology</topic><topic>Ecosystem</topic><topic>Evolutionary Biology</topic><topic>Fatty acids</topic><topic>Fisheries</topic><topic>Harbors</topic><topic>Invertebrates - physiology</topic><topic>Life Sciences</topic><topic>Marine environment</topic><topic>Metagenome - genetics</topic><topic>Microbial Ecology</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Mineralization</topic><topic>Original</topic><topic>original-article</topic><topic>Photosynthesis</topic><topic>Photosynthesis - genetics</topic><topic>Rhodophyta - microbiology</topic><topic>Sulfate reduction</topic><topic>Sulfates</topic><topic>Sulfides</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cavalcanti, Giselle S</creatorcontrib><creatorcontrib>Gregoracci, Gustavo B</creatorcontrib><creatorcontrib>dos Santos, Eidy O</creatorcontrib><creatorcontrib>Silveira, Cynthia B</creatorcontrib><creatorcontrib>Meirelles, Pedro M</creatorcontrib><creatorcontrib>Longo, Leila</creatorcontrib><creatorcontrib>Gotoh, Kazuyoshi</creatorcontrib><creatorcontrib>Nakamura, Shota</creatorcontrib><creatorcontrib>Iida, Tetsuya</creatorcontrib><creatorcontrib>Sawabe, Tomoo</creatorcontrib><creatorcontrib>Rezende, Carlos E</creatorcontrib><creatorcontrib>Francini-Filho, Ronaldo B</creatorcontrib><creatorcontrib>Moura, Rodrigo L</creatorcontrib><creatorcontrib>Amado-Filho, Gilberto M</creatorcontrib><creatorcontrib>Thompson, Fabiano L</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The ISME Journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cavalcanti, Giselle S</au><au>Gregoracci, Gustavo B</au><au>dos Santos, Eidy O</au><au>Silveira, Cynthia B</au><au>Meirelles, Pedro M</au><au>Longo, Leila</au><au>Gotoh, Kazuyoshi</au><au>Nakamura, Shota</au><au>Iida, Tetsuya</au><au>Sawabe, Tomoo</au><au>Rezende, Carlos E</au><au>Francini-Filho, Ronaldo B</au><au>Moura, Rodrigo L</au><au>Amado-Filho, Gilberto M</au><au>Thompson, Fabiano L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean</atitle><jtitle>The ISME Journal</jtitle><stitle>ISME J</stitle><addtitle>ISME J</addtitle><date>2014-01-01</date><risdate>2014</risdate><volume>8</volume><issue>1</issue><spage>52</spage><epage>62</epage><pages>52-62</pages><issn>1751-7362</issn><eissn>1751-7370</eissn><abstract>Rhodoliths are free-living coralline algae (
Rhodophyta
,
Corallinales
) that are ecologically important for the functioning of marine environments. They form extensive beds distributed worldwide, providing a habitat and nursery for benthic organisms and space for fisheries, and are an important source of calcium carbonate. The Abrolhos Bank, off eastern Brazil, harbors the world’s largest continuous rhodolith bed (of ∼21 000 km
2
) and has one of the largest marine CaCO
3
deposits (producing 25 megatons of CaCO
3
per year). Nevertheless, there is a lack of information about the microbial diversity, photosynthetic potential and ecological interactions within the rhodolith holobiont. Herein, we performed an ecophysiologic and metagenomic analysis of the Abrolhos rhodoliths to understand their microbial composition and functional components. Rhodoliths contained a specific microbiome that displayed a significant enrichment in aerobic ammonia-oxidizing betaproteobacteria and dissimilative sulfate-reducing deltaproteobacteria. We also observed a significant contribution of bacterial guilds (that is, photolithoautotrophs, anaerobic heterotrophs, sulfide oxidizers, anoxygenic phototrophs and methanogens) in the rhodolith metagenome, suggested to have important roles in biomineralization. The increased hits in aromatic compounds, fatty acid and secondary metabolism subsystems hint at an important chemically mediated interaction in which a functional job partition among eukaryal, archaeal and bacterial groups allows the rhodolith holobiont to thrive in the global ocean. High rates of photosynthesis were measured for Abrolhos rhodoliths (52.16 μmol carbon m
−2
s
−1
), allowing the entire Abrolhos rhodolith bed to produce 5.65 × 10
5
tons C per day. This estimate illustrates the great importance of the Abrolhos rhodolith beds for dissolved carbon production in the South Atlantic Ocean.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>23985749</pmid><doi>10.1038/ismej.2013.133</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1751-7362 |
ispartof | The ISME Journal, 2014-01, Vol.8 (1), p.52-62 |
issn | 1751-7362 1751-7370 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3869012 |
source | Oxford Journals Open Access Collection; MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
subjects | 631/158/2446 631/326/2565/2142 631/326/2565/855 631/443 Algae Ammonia Animals Archaea - classification Archaea - genetics Archaea - metabolism Archaea - physiology Aromatic compounds Atlantic Ocean Bacteria - classification Bacteria - genetics Bacteria - metabolism Bacterial Physiological Phenomena Biodiversity Biomedical and Life Sciences Brazil Calcium carbonate Calcium Carbonate - metabolism Carbon Carbon - metabolism Ecology Ecosystem Evolutionary Biology Fatty acids Fisheries Harbors Invertebrates - physiology Life Sciences Marine environment Metagenome - genetics Microbial Ecology Microbial Genetics and Genomics Microbiology Mineralization Original original-article Photosynthesis Photosynthesis - genetics Rhodophyta - microbiology Sulfate reduction Sulfates Sulfides |
title | Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-31T08%3A06%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Physiologic%20and%20metagenomic%20attributes%20of%20the%20rhodoliths%20forming%20the%20largest%20CaCO3%20bed%20in%20the%20South%20Atlantic%20Ocean&rft.jtitle=The%20ISME%20Journal&rft.au=Cavalcanti,%20Giselle%20S&rft.date=2014-01-01&rft.volume=8&rft.issue=1&rft.spage=52&rft.epage=62&rft.pages=52-62&rft.issn=1751-7362&rft.eissn=1751-7370&rft_id=info:doi/10.1038/ismej.2013.133&rft_dat=%3Cproquest_pubme%3E3158200931%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1468600577&rft_id=info:pmid/23985749&rfr_iscdi=true |