Characterization of the spectrum of insecticidal activity of a double-stranded RNA with targeted activity against Western Corn Rootworm (Diabrotica virgifera virgifera LeConte)
The sequence specificity of the endogenous RNA interference pathway allows targeted suppression of genes essential for insect survival and enables the development of durable and efficacious insecticidal products having a low likelihood to adversely impact non-target organisms. The spectrum of insect...
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creator | Bachman, Pamela M. Bolognesi, Renata Moar, William J. Mueller, Geoffrey M. Paradise, Mark S. Ramaseshadri, Parthasarathy Tan, Jianguo Uffman, Joshua P. Warren, JoAnne Wiggins, B. Elizabeth Levine, Steven L. |
description | The sequence specificity of the endogenous RNA interference pathway allows targeted suppression of genes essential for insect survival and enables the development of durable and efficacious insecticidal products having a low likelihood to adversely impact non-target organisms. The spectrum of insecticidal activity of a 240 nucleotide (nt) dsRNA targeting the
Snf7
ortholog in Western Corn Rootworm (WCR;
Diabrotica virgifera virgifera
) was characterized by selecting and testing insects based upon their phylogenetic relatedness to WCR. Insect species, representing 10 families and 4 Orders, were evaluated in subchronic or chronic diet bioassays that measured potential lethal and sublethal effects. When a specific species could not be tested in diet bioassays, the ortholog to the WCR
Snf7
gene (DvSnf7) was cloned and corresponding dsRNAs were tested against WCR and Colorado potato beetle (
Leptinotarsa decemlineata
); model systems known to be sensitive to ingested dsRNA. Bioassay results demonstrate that the spectrum of activity for DvSnf7 is narrow and activity is only evident in a subset of beetles within the Galerucinae subfamily of Chrysomelidae (>90 % identity with WCR Snf7 240 nt). This approach allowed for evaluating the relationship between minimum shared nt sequence length and activity. A shared sequence length of ≥21 nt was required for efficacy against WCR (containing 221 potential 21-nt matches) and all active orthologs contained at least three 21 nt matches. These results also suggest that WCR resistance to DvSnf7 dsRNA due to single nucleotide polymorphisms in the target sequence of 240 nt is highly unlikely. |
doi_str_mv | 10.1007/s11248-013-9716-5 |
format | Article |
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Snf7
ortholog in Western Corn Rootworm (WCR;
Diabrotica virgifera virgifera
) was characterized by selecting and testing insects based upon their phylogenetic relatedness to WCR. Insect species, representing 10 families and 4 Orders, were evaluated in subchronic or chronic diet bioassays that measured potential lethal and sublethal effects. When a specific species could not be tested in diet bioassays, the ortholog to the WCR
Snf7
gene (DvSnf7) was cloned and corresponding dsRNAs were tested against WCR and Colorado potato beetle (
Leptinotarsa decemlineata
); model systems known to be sensitive to ingested dsRNA. Bioassay results demonstrate that the spectrum of activity for DvSnf7 is narrow and activity is only evident in a subset of beetles within the Galerucinae subfamily of Chrysomelidae (>90 % identity with WCR Snf7 240 nt). This approach allowed for evaluating the relationship between minimum shared nt sequence length and activity. A shared sequence length of ≥21 nt was required for efficacy against WCR (containing 221 potential 21-nt matches) and all active orthologs contained at least three 21 nt matches. These results also suggest that WCR resistance to DvSnf7 dsRNA due to single nucleotide polymorphisms in the target sequence of 240 nt is highly unlikely.</description><identifier>ISSN: 0962-8819</identifier><identifier>EISSN: 1573-9368</identifier><identifier>DOI: 10.1007/s11248-013-9716-5</identifier><identifier>PMID: 23748931</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Animal Genetics and Genomics ; Animals ; bioassays ; Biological and medical sciences ; Biomedical and Life Sciences ; Biomedical Engineering/Biotechnology ; Biotechnology ; Coleoptera - drug effects ; Coleoptera - genetics ; Coleoptera - pathogenicity ; Diabrotica virgifera virgifera ; diet ; double-stranded RNA ; Endotoxins - antagonists & inhibitors ; Endotoxins - genetics ; Fundamental and applied biological sciences. Psychology ; genes ; Genetic Engineering ; Genetic technics ; genetically modified organisms ; Insect Control - methods ; Insect Proteins - antagonists & inhibitors ; Insect Proteins - genetics ; insecticidal properties ; insects ; Larva - genetics ; Leptinotarsa decemlineata ; Life Sciences ; Methods. Procedures. Technologies ; Molecular Medicine ; Original Paper ; phylogeny ; Plant Genetics and Genomics ; Plants, Genetically Modified - genetics ; RNA Interference ; RNA, Double-Stranded - genetics ; RNA, Double-Stranded - pharmacology ; species ; subfamily ; Transgenic animals and transgenic plants ; Transgenics ; Zea mays - genetics</subject><ispartof>Transgenic research, 2013-12, Vol.22 (6), p.1207-1222</ispartof><rights>The Author(s) 2013</rights><rights>2015 INIST-CNRS</rights><rights>Springer Science+Business Media Dordrecht 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c533t-f07ef01dad7fb8a93e6df038ecbd97b6a2c4b660f581fafd207d5924cc1370b13</citedby><cites>FETCH-LOGICAL-c533t-f07ef01dad7fb8a93e6df038ecbd97b6a2c4b660f581fafd207d5924cc1370b13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11248-013-9716-5$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11248-013-9716-5$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=28010455$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23748931$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bachman, Pamela M.</creatorcontrib><creatorcontrib>Bolognesi, Renata</creatorcontrib><creatorcontrib>Moar, William J.</creatorcontrib><creatorcontrib>Mueller, Geoffrey M.</creatorcontrib><creatorcontrib>Paradise, Mark S.</creatorcontrib><creatorcontrib>Ramaseshadri, Parthasarathy</creatorcontrib><creatorcontrib>Tan, Jianguo</creatorcontrib><creatorcontrib>Uffman, Joshua P.</creatorcontrib><creatorcontrib>Warren, JoAnne</creatorcontrib><creatorcontrib>Wiggins, B. Elizabeth</creatorcontrib><creatorcontrib>Levine, Steven L.</creatorcontrib><title>Characterization of the spectrum of insecticidal activity of a double-stranded RNA with targeted activity against Western Corn Rootworm (Diabrotica virgifera virgifera LeConte)</title><title>Transgenic research</title><addtitle>Transgenic Res</addtitle><addtitle>Transgenic Res</addtitle><description>The sequence specificity of the endogenous RNA interference pathway allows targeted suppression of genes essential for insect survival and enables the development of durable and efficacious insecticidal products having a low likelihood to adversely impact non-target organisms. The spectrum of insecticidal activity of a 240 nucleotide (nt) dsRNA targeting the
Snf7
ortholog in Western Corn Rootworm (WCR;
Diabrotica virgifera virgifera
) was characterized by selecting and testing insects based upon their phylogenetic relatedness to WCR. Insect species, representing 10 families and 4 Orders, were evaluated in subchronic or chronic diet bioassays that measured potential lethal and sublethal effects. When a specific species could not be tested in diet bioassays, the ortholog to the WCR
Snf7
gene (DvSnf7) was cloned and corresponding dsRNAs were tested against WCR and Colorado potato beetle (
Leptinotarsa decemlineata
); model systems known to be sensitive to ingested dsRNA. Bioassay results demonstrate that the spectrum of activity for DvSnf7 is narrow and activity is only evident in a subset of beetles within the Galerucinae subfamily of Chrysomelidae (>90 % identity with WCR Snf7 240 nt). This approach allowed for evaluating the relationship between minimum shared nt sequence length and activity. A shared sequence length of ≥21 nt was required for efficacy against WCR (containing 221 potential 21-nt matches) and all active orthologs contained at least three 21 nt matches. These results also suggest that WCR resistance to DvSnf7 dsRNA due to single nucleotide polymorphisms in the target sequence of 240 nt is highly unlikely.</description><subject>Animal Genetics and Genomics</subject><subject>Animals</subject><subject>bioassays</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedical Engineering/Biotechnology</subject><subject>Biotechnology</subject><subject>Coleoptera - drug effects</subject><subject>Coleoptera - genetics</subject><subject>Coleoptera - pathogenicity</subject><subject>Diabrotica virgifera virgifera</subject><subject>diet</subject><subject>double-stranded RNA</subject><subject>Endotoxins - antagonists & inhibitors</subject><subject>Endotoxins - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Genetic Engineering</subject><subject>Genetic technics</subject><subject>genetically modified organisms</subject><subject>Insect Control - methods</subject><subject>Insect Proteins - antagonists & inhibitors</subject><subject>Insect Proteins - genetics</subject><subject>insecticidal properties</subject><subject>insects</subject><subject>Larva - genetics</subject><subject>Leptinotarsa decemlineata</subject><subject>Life Sciences</subject><subject>Methods. Procedures. Technologies</subject><subject>Molecular Medicine</subject><subject>Original Paper</subject><subject>phylogeny</subject><subject>Plant Genetics and Genomics</subject><subject>Plants, Genetically Modified - genetics</subject><subject>RNA Interference</subject><subject>RNA, Double-Stranded - genetics</subject><subject>RNA, Double-Stranded - pharmacology</subject><subject>species</subject><subject>subfamily</subject><subject>Transgenic animals and transgenic plants</subject><subject>Transgenics</subject><subject>Zea mays - genetics</subject><issn>0962-8819</issn><issn>1573-9368</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqFkl2L1DAUhoso7rj6A7yRgAjrRTVpmia5EZbxEwaFRfEypPmYydJpxiSdZf1V_kTPMOM4CuJNmtPznPec075V9ZjgFwRj_jIT0rSixoTWkpOuZneqGWEcItqJu9UMy66phSDyrHqQ8zXGUCXo_eqsobwVkpJZ9WO-0kmb4lL4rkuII4oelZVDeeNMSdN6F4cxQxBMsHpAAIdtKLe7hEY2Tv3g6lySHq2z6OrjJboJZYWKTktX4M2R10sNQgV9dRnajWge4biKsdzEtEYXr4PuU4QuGm1DWgbv0ult4eZxLO75w-qe10N2jw7P8-rL2zef5-_rxad3H-aXi9owSkvtMXceE6st973QkrrOekyFM72VvO90Y9q-67BngnjtbYO5ZbJpjSGU457Q8-rVXncz9WtnjRthxUFtUljrdKuiDurPzBhWahm3igrKJGtB4OIgkOK3CXZW65CNGwY9ujhlRQmjnEjKyH9R0naEtoRhDOjTv9DrOKURvgRQTErGMZdAkT1lUsw5OX-cm2C1s47aW0eBddTOOopBzZPThY8Vv7wCwLMDoLPRg4c_bkL-zQmwV8t2Qs2ey5Aaly6djPjP7j8Bhx3gYA</recordid><startdate>20131201</startdate><enddate>20131201</enddate><creator>Bachman, Pamela M.</creator><creator>Bolognesi, Renata</creator><creator>Moar, William J.</creator><creator>Mueller, Geoffrey M.</creator><creator>Paradise, Mark S.</creator><creator>Ramaseshadri, Parthasarathy</creator><creator>Tan, Jianguo</creator><creator>Uffman, Joshua P.</creator><creator>Warren, JoAnne</creator><creator>Wiggins, B. Elizabeth</creator><creator>Levine, Steven L.</creator><general>Springer Netherlands</general><general>Springer</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20131201</creationdate><title>Characterization of the spectrum of insecticidal activity of a double-stranded RNA with targeted activity against Western Corn Rootworm (Diabrotica virgifera virgifera LeConte)</title><author>Bachman, Pamela M. ; Bolognesi, Renata ; Moar, William J. ; Mueller, Geoffrey M. ; Paradise, Mark S. ; Ramaseshadri, Parthasarathy ; Tan, Jianguo ; Uffman, Joshua P. ; Warren, JoAnne ; Wiggins, B. Elizabeth ; Levine, Steven L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c533t-f07ef01dad7fb8a93e6df038ecbd97b6a2c4b660f581fafd207d5924cc1370b13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animal Genetics and Genomics</topic><topic>Animals</topic><topic>bioassays</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedical Engineering/Biotechnology</topic><topic>Biotechnology</topic><topic>Coleoptera - drug effects</topic><topic>Coleoptera - genetics</topic><topic>Coleoptera - pathogenicity</topic><topic>Diabrotica virgifera virgifera</topic><topic>diet</topic><topic>double-stranded RNA</topic><topic>Endotoxins - antagonists & inhibitors</topic><topic>Endotoxins - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>Genetic Engineering</topic><topic>Genetic technics</topic><topic>genetically modified organisms</topic><topic>Insect Control - methods</topic><topic>Insect Proteins - antagonists & inhibitors</topic><topic>Insect Proteins - genetics</topic><topic>insecticidal properties</topic><topic>insects</topic><topic>Larva - genetics</topic><topic>Leptinotarsa decemlineata</topic><topic>Life Sciences</topic><topic>Methods. Procedures. Technologies</topic><topic>Molecular Medicine</topic><topic>Original Paper</topic><topic>phylogeny</topic><topic>Plant Genetics and Genomics</topic><topic>Plants, Genetically Modified - genetics</topic><topic>RNA Interference</topic><topic>RNA, Double-Stranded - genetics</topic><topic>RNA, Double-Stranded - pharmacology</topic><topic>species</topic><topic>subfamily</topic><topic>Transgenic animals and transgenic plants</topic><topic>Transgenics</topic><topic>Zea mays - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bachman, Pamela M.</creatorcontrib><creatorcontrib>Bolognesi, Renata</creatorcontrib><creatorcontrib>Moar, William J.</creatorcontrib><creatorcontrib>Mueller, Geoffrey M.</creatorcontrib><creatorcontrib>Paradise, Mark S.</creatorcontrib><creatorcontrib>Ramaseshadri, Parthasarathy</creatorcontrib><creatorcontrib>Tan, Jianguo</creatorcontrib><creatorcontrib>Uffman, Joshua P.</creatorcontrib><creatorcontrib>Warren, JoAnne</creatorcontrib><creatorcontrib>Wiggins, B. Elizabeth</creatorcontrib><creatorcontrib>Levine, Steven L.</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>ProQuest Health & Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health & Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied & Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Transgenic research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bachman, Pamela M.</au><au>Bolognesi, Renata</au><au>Moar, William J.</au><au>Mueller, Geoffrey M.</au><au>Paradise, Mark S.</au><au>Ramaseshadri, Parthasarathy</au><au>Tan, Jianguo</au><au>Uffman, Joshua P.</au><au>Warren, JoAnne</au><au>Wiggins, B. Elizabeth</au><au>Levine, Steven L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of the spectrum of insecticidal activity of a double-stranded RNA with targeted activity against Western Corn Rootworm (Diabrotica virgifera virgifera LeConte)</atitle><jtitle>Transgenic research</jtitle><stitle>Transgenic Res</stitle><addtitle>Transgenic Res</addtitle><date>2013-12-01</date><risdate>2013</risdate><volume>22</volume><issue>6</issue><spage>1207</spage><epage>1222</epage><pages>1207-1222</pages><issn>0962-8819</issn><eissn>1573-9368</eissn><abstract>The sequence specificity of the endogenous RNA interference pathway allows targeted suppression of genes essential for insect survival and enables the development of durable and efficacious insecticidal products having a low likelihood to adversely impact non-target organisms. The spectrum of insecticidal activity of a 240 nucleotide (nt) dsRNA targeting the
Snf7
ortholog in Western Corn Rootworm (WCR;
Diabrotica virgifera virgifera
) was characterized by selecting and testing insects based upon their phylogenetic relatedness to WCR. Insect species, representing 10 families and 4 Orders, were evaluated in subchronic or chronic diet bioassays that measured potential lethal and sublethal effects. When a specific species could not be tested in diet bioassays, the ortholog to the WCR
Snf7
gene (DvSnf7) was cloned and corresponding dsRNAs were tested against WCR and Colorado potato beetle (
Leptinotarsa decemlineata
); model systems known to be sensitive to ingested dsRNA. Bioassay results demonstrate that the spectrum of activity for DvSnf7 is narrow and activity is only evident in a subset of beetles within the Galerucinae subfamily of Chrysomelidae (>90 % identity with WCR Snf7 240 nt). This approach allowed for evaluating the relationship between minimum shared nt sequence length and activity. A shared sequence length of ≥21 nt was required for efficacy against WCR (containing 221 potential 21-nt matches) and all active orthologs contained at least three 21 nt matches. These results also suggest that WCR resistance to DvSnf7 dsRNA due to single nucleotide polymorphisms in the target sequence of 240 nt is highly unlikely.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>23748931</pmid><doi>10.1007/s11248-013-9716-5</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal Genetics and Genomics Animals bioassays Biological and medical sciences Biomedical and Life Sciences Biomedical Engineering/Biotechnology Biotechnology Coleoptera - drug effects Coleoptera - genetics Coleoptera - pathogenicity Diabrotica virgifera virgifera diet double-stranded RNA Endotoxins - antagonists & inhibitors Endotoxins - genetics Fundamental and applied biological sciences. Psychology genes Genetic Engineering Genetic technics genetically modified organisms Insect Control - methods Insect Proteins - antagonists & inhibitors Insect Proteins - genetics insecticidal properties insects Larva - genetics Leptinotarsa decemlineata Life Sciences Methods. Procedures. Technologies Molecular Medicine Original Paper phylogeny Plant Genetics and Genomics Plants, Genetically Modified - genetics RNA Interference RNA, Double-Stranded - genetics RNA, Double-Stranded - pharmacology species subfamily Transgenic animals and transgenic plants Transgenics Zea mays - genetics |
title | Characterization of the spectrum of insecticidal activity of a double-stranded RNA with targeted activity against Western Corn Rootworm (Diabrotica virgifera virgifera LeConte) |
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