The forensiX Evidence Collection Tube and Its Impact on DNA Preservation and Recovery
Biological samples are vulnerable to degradation from the time they are collected until they are analysed at the laboratory. Biological contaminants, such as bacteria, fungi, and enzymes, as well as environmental factors, such as sunlight, heat, and humidity, can increase the rate of DNA degradation...
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creator | Stamm, Christoph Quartermaine, Roy Lardi, Elges Hostettler, Bernhard Krebs, Walter Berner, Florian Holzinger, Ralf Garvin, Alex M. Hertli, Christian |
description | Biological samples are vulnerable to degradation from the time they are collected until they are analysed at the laboratory. Biological contaminants, such as bacteria, fungi, and enzymes, as well as environmental factors, such as sunlight, heat, and humidity, can increase the rate of DNA degradation. Currently, DNA samples are normally dried or frozen to limit their degradation prior to their arrival at the laboratory. In this study, the effect of the sample drying rate on DNA preservation was investigated, as well as a comparison between drying and freezing methods. The drying performances of two commercially available DNA collection tools (swab and drying tube) with different drying rates were evaluated. The swabs were used to collect human saliva, placed into the drying tubes, and stored in a controlled environment at 25°C and 60% relative humidity, or frozen at −20°C, for 2 weeks. Swabs that were stored in fast sample drying tubes yielded 95% recoverable DNA, whereas swabs stored in tubes with slower sample drying rates yielded only 12% recoverable DNA; saliva stored in a microtube at −20°C was used as a control. Thus, DNA sampling tools that offer rapid drying can significantly improve the preservation of DNA collected on a swab, increasing the quantity of DNA available for subsequent analysis. |
doi_str_mv | 10.1155/2013/105797 |
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Biological contaminants, such as bacteria, fungi, and enzymes, as well as environmental factors, such as sunlight, heat, and humidity, can increase the rate of DNA degradation. Currently, DNA samples are normally dried or frozen to limit their degradation prior to their arrival at the laboratory. In this study, the effect of the sample drying rate on DNA preservation was investigated, as well as a comparison between drying and freezing methods. The drying performances of two commercially available DNA collection tools (swab and drying tube) with different drying rates were evaluated. The swabs were used to collect human saliva, placed into the drying tubes, and stored in a controlled environment at 25°C and 60% relative humidity, or frozen at −20°C, for 2 weeks. Swabs that were stored in fast sample drying tubes yielded 95% recoverable DNA, whereas swabs stored in tubes with slower sample drying rates yielded only 12% recoverable DNA; saliva stored in a microtube at −20°C was used as a control. Thus, DNA sampling tools that offer rapid drying can significantly improve the preservation of DNA collected on a swab, increasing the quantity of DNA available for subsequent analysis.</description><identifier>ISSN: 2314-6133</identifier><identifier>EISSN: 2314-6141</identifier><identifier>DOI: 10.1155/2013/105797</identifier><identifier>PMID: 24288659</identifier><language>eng</language><publisher>Cairo, Egypt: Hindawi Publishing Corporation</publisher><subject>Adenosine Triphosphate - metabolism ; Analysis ; Bacteria - growth & development ; Desiccation ; DNA ; DNA - isolation & purification ; Enzymes ; Forensic Sciences - instrumentation ; Forensic Sciences - methods ; Humans ; Physiological aspects ; Preservation of materials ; Preservation, Biological - instrumentation ; Preservation, Biological - methods ; Saliva - metabolism ; Saliva - microbiology ; Specimen Handling - instrumentation ; Specimen Handling - methods ; Time Factors</subject><ispartof>BioMed research international, 2013-01, Vol.2013 (2013), p.1-7</ispartof><rights>Copyright © 2013 Alex M. Garvin et al.</rights><rights>COPYRIGHT 2013 John Wiley & Sons, Inc.</rights><rights>Copyright © 2013 Alex M. Garvin et al. 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c500t-2a2c6ec3e6a3a660304bd9c44eeaa9ff77cc32b2d45956c149cace272d56f493</citedby><cites>FETCH-LOGICAL-c500t-2a2c6ec3e6a3a660304bd9c44eeaa9ff77cc32b2d45956c149cace272d56f493</cites><orcidid>0000-0002-4753-243X ; 0000-0001-8360-2143 ; 0000-0002-7537-2429 ; 0000-0003-1841-9574 ; 0000-0001-8113-3654 ; 0000-0003-2937-3321 ; 0000-0003-1999-5178 ; 0000-0001-8537-4033</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3830855/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3830855/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24288659$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Byrne, Barry J.</contributor><creatorcontrib>Stamm, Christoph</creatorcontrib><creatorcontrib>Quartermaine, Roy</creatorcontrib><creatorcontrib>Lardi, Elges</creatorcontrib><creatorcontrib>Hostettler, Bernhard</creatorcontrib><creatorcontrib>Krebs, Walter</creatorcontrib><creatorcontrib>Berner, Florian</creatorcontrib><creatorcontrib>Holzinger, Ralf</creatorcontrib><creatorcontrib>Garvin, Alex M.</creatorcontrib><creatorcontrib>Hertli, Christian</creatorcontrib><title>The forensiX Evidence Collection Tube and Its Impact on DNA Preservation and Recovery</title><title>BioMed research international</title><addtitle>Biomed Res Int</addtitle><description>Biological samples are vulnerable to degradation from the time they are collected until they are analysed at the laboratory. Biological contaminants, such as bacteria, fungi, and enzymes, as well as environmental factors, such as sunlight, heat, and humidity, can increase the rate of DNA degradation. Currently, DNA samples are normally dried or frozen to limit their degradation prior to their arrival at the laboratory. In this study, the effect of the sample drying rate on DNA preservation was investigated, as well as a comparison between drying and freezing methods. The drying performances of two commercially available DNA collection tools (swab and drying tube) with different drying rates were evaluated. The swabs were used to collect human saliva, placed into the drying tubes, and stored in a controlled environment at 25°C and 60% relative humidity, or frozen at −20°C, for 2 weeks. Swabs that were stored in fast sample drying tubes yielded 95% recoverable DNA, whereas swabs stored in tubes with slower sample drying rates yielded only 12% recoverable DNA; saliva stored in a microtube at −20°C was used as a control. Thus, DNA sampling tools that offer rapid drying can significantly improve the preservation of DNA collected on a swab, increasing the quantity of DNA available for subsequent analysis.</description><subject>Adenosine Triphosphate - metabolism</subject><subject>Analysis</subject><subject>Bacteria - growth & development</subject><subject>Desiccation</subject><subject>DNA</subject><subject>DNA - isolation & purification</subject><subject>Enzymes</subject><subject>Forensic Sciences - instrumentation</subject><subject>Forensic Sciences - methods</subject><subject>Humans</subject><subject>Physiological aspects</subject><subject>Preservation of materials</subject><subject>Preservation, Biological - instrumentation</subject><subject>Preservation, Biological - methods</subject><subject>Saliva - metabolism</subject><subject>Saliva - microbiology</subject><subject>Specimen Handling - instrumentation</subject><subject>Specimen Handling - methods</subject><subject>Time Factors</subject><issn>2314-6133</issn><issn>2314-6141</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>RHX</sourceid><sourceid>EIF</sourceid><recordid>eNqN0U9LHDEcBuAgiop66l0CXqSyNf8zuQjL1rYL0payhd5CNvMbNzKbrMnsit--s45d7M1cEpKHNwkvQh8o-USplNeMUH5NidRG76FjxqkYKSro_m7N-RE6K-WB9KOiihh1iI6YYFWlpDlGv2cLwE3KEEv4g283oYboAU9S24LvQop4tp4DdrHG067g6XLlfIf77c_fx_hnhgJ5417clvwCnzaQn0_RQePaAmev8wmafbmdTb6N7n58nU7GdyMvCelGzDGvwHNQjjulCCdiXhsvBIBzpmm09p6zOauFNFJ5Kox3HphmtVSNMPwE3Qyxq_V8CbWH2GXX2lUOS5efbXLB_n8Sw8Lep43lFSeVlH3A5WtATo9rKJ1dhuKhbV2EtC6WCiUk0Ybod1FhtFKqpxcDvXct2BCb1F_ut9yOueZcM_Ly-KtB-ZxKydDs3k2J3XZrt93aodten7_96s7-a7IHHwewCLF2T-F9adATaNwbTDiTFf8Li_ez_A</recordid><startdate>20130101</startdate><enddate>20130101</enddate><creator>Stamm, Christoph</creator><creator>Quartermaine, Roy</creator><creator>Lardi, Elges</creator><creator>Hostettler, Bernhard</creator><creator>Krebs, Walter</creator><creator>Berner, Florian</creator><creator>Holzinger, Ralf</creator><creator>Garvin, Alex M.</creator><creator>Hertli, Christian</creator><general>Hindawi Publishing Corporation</general><general>John Wiley & Sons, Inc</general><scope>ADJCN</scope><scope>AHFXO</scope><scope>RHU</scope><scope>RHW</scope><scope>RHX</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-4753-243X</orcidid><orcidid>https://orcid.org/0000-0001-8360-2143</orcidid><orcidid>https://orcid.org/0000-0002-7537-2429</orcidid><orcidid>https://orcid.org/0000-0003-1841-9574</orcidid><orcidid>https://orcid.org/0000-0001-8113-3654</orcidid><orcidid>https://orcid.org/0000-0003-2937-3321</orcidid><orcidid>https://orcid.org/0000-0003-1999-5178</orcidid><orcidid>https://orcid.org/0000-0001-8537-4033</orcidid></search><sort><creationdate>20130101</creationdate><title>The forensiX Evidence Collection Tube and Its Impact on DNA Preservation and Recovery</title><author>Stamm, Christoph ; 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Biological contaminants, such as bacteria, fungi, and enzymes, as well as environmental factors, such as sunlight, heat, and humidity, can increase the rate of DNA degradation. Currently, DNA samples are normally dried or frozen to limit their degradation prior to their arrival at the laboratory. In this study, the effect of the sample drying rate on DNA preservation was investigated, as well as a comparison between drying and freezing methods. The drying performances of two commercially available DNA collection tools (swab and drying tube) with different drying rates were evaluated. The swabs were used to collect human saliva, placed into the drying tubes, and stored in a controlled environment at 25°C and 60% relative humidity, or frozen at −20°C, for 2 weeks. Swabs that were stored in fast sample drying tubes yielded 95% recoverable DNA, whereas swabs stored in tubes with slower sample drying rates yielded only 12% recoverable DNA; saliva stored in a microtube at −20°C was used as a control. Thus, DNA sampling tools that offer rapid drying can significantly improve the preservation of DNA collected on a swab, increasing the quantity of DNA available for subsequent analysis.</abstract><cop>Cairo, Egypt</cop><pub>Hindawi Publishing Corporation</pub><pmid>24288659</pmid><doi>10.1155/2013/105797</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-4753-243X</orcidid><orcidid>https://orcid.org/0000-0001-8360-2143</orcidid><orcidid>https://orcid.org/0000-0002-7537-2429</orcidid><orcidid>https://orcid.org/0000-0003-1841-9574</orcidid><orcidid>https://orcid.org/0000-0001-8113-3654</orcidid><orcidid>https://orcid.org/0000-0003-2937-3321</orcidid><orcidid>https://orcid.org/0000-0003-1999-5178</orcidid><orcidid>https://orcid.org/0000-0001-8537-4033</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adenosine Triphosphate - metabolism Analysis Bacteria - growth & development Desiccation DNA DNA - isolation & purification Enzymes Forensic Sciences - instrumentation Forensic Sciences - methods Humans Physiological aspects Preservation of materials Preservation, Biological - instrumentation Preservation, Biological - methods Saliva - metabolism Saliva - microbiology Specimen Handling - instrumentation Specimen Handling - methods Time Factors |
title | The forensiX Evidence Collection Tube and Its Impact on DNA Preservation and Recovery |
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