Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site

Vertebrate 4.1 proteins have a spectrin-actin-binding (SAB) domain, which is lacking in all the invertebrate 4.1 proteins indentified so far and it was therefore proposed that the SAB domain emerged with the advent of vertebrates during evolution. Here we demonstrated for the first time that amphiox...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Scientific reports 2013-10, Vol.3 (1), p.2873-2873, Article 2873
Hauptverfasser: Wang, Lixia, Wang, Yuan, Li, Zhaohe, Gao, Zhan, Zhang, Shicui
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 2873
container_issue 1
container_start_page 2873
container_title Scientific reports
container_volume 3
creator Wang, Lixia
Wang, Yuan
Li, Zhaohe
Gao, Zhan
Zhang, Shicui
description Vertebrate 4.1 proteins have a spectrin-actin-binding (SAB) domain, which is lacking in all the invertebrate 4.1 proteins indentified so far and it was therefore proposed that the SAB domain emerged with the advent of vertebrates during evolution. Here we demonstrated for the first time that amphioxus (an invertebrate chordate) protein 4.1, though lacking a recognizable SAB, was able to bind both spectrin and actin, with a binding capacity comparable to that of human protein 4.1. Detailed structure-activity analyses revealed that the unique domain U2/3 was a newly identified SAB-like domain capable of interacting with spectrin and actin, suggesting the presence of a “cryptic” SAB domain in amphioxus 4.1 protein. We also showed that amphioxus 4.1 protein gene was the common ancestor of vertebrate 4.1 protein genes, from which 4.1R, 4.1N, 4.1G and 4.1B genes originated. This work will encourage further study on the structure-activity of invertebrate 4.1 protein and its interacting proteins.
doi_str_mv 10.1038/srep02873
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3791450</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1898174058</sourcerecordid><originalsourceid>FETCH-LOGICAL-c438t-2cfb9526ea889a8cf18130b4aa4a744f85e691854fbffb971bfe3de01b3393023</originalsourceid><addsrcrecordid>eNplkV1rFDEUhoMottRe-Ack4I0Wps3XzCReCFJbWyh4o9chkz3ZTZlJxiQj1l9vlq3LWnORr_Pw5JAXodeUnFPC5UVOMBMme_4MHTMi2oZxxp4f7I_Qac73pI6WKUHVS3TEBFFdx_pjFK-XYIuPwYzYbkwytkDyv832CkeH5xQL-IDFOcWbOMUxrnE9mmne-PhryR_wZ3A--LDGBtv0MBdvcZ7BluRDU211HnxYbYHsC7xCL5wZM5w-rifo-_XVt8ub5u7rl9vLT3eNFVyWhlk3qJZ1YKRURlpHJeVkEMYI0wvhZAudorIVbnCV7OnggK-A0IFzxQnjJ-jjzjsvwwQrC6EkM-o5-cmkBx2N1_9Wgt_odfypea-oaEkVvHsUpPhjgVz05LOFcTQB4pI1FYIL2nWtqOjbJ-h9XFL90UpJJWkvSCsr9X5H2RRzDc3tm6FEb5PU-yQr--aw-z35N7cKnO2AXEthDengyf9sfwB2eKmA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1898174058</pqid></control><display><type>article</type><title>Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>Springer Nature OA Free Journals</source><source>Nature Free</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Wang, Lixia ; Wang, Yuan ; Li, Zhaohe ; Gao, Zhan ; Zhang, Shicui</creator><creatorcontrib>Wang, Lixia ; Wang, Yuan ; Li, Zhaohe ; Gao, Zhan ; Zhang, Shicui</creatorcontrib><description>Vertebrate 4.1 proteins have a spectrin-actin-binding (SAB) domain, which is lacking in all the invertebrate 4.1 proteins indentified so far and it was therefore proposed that the SAB domain emerged with the advent of vertebrates during evolution. Here we demonstrated for the first time that amphioxus (an invertebrate chordate) protein 4.1, though lacking a recognizable SAB, was able to bind both spectrin and actin, with a binding capacity comparable to that of human protein 4.1. Detailed structure-activity analyses revealed that the unique domain U2/3 was a newly identified SAB-like domain capable of interacting with spectrin and actin, suggesting the presence of a “cryptic” SAB domain in amphioxus 4.1 protein. We also showed that amphioxus 4.1 protein gene was the common ancestor of vertebrate 4.1 protein genes, from which 4.1R, 4.1N, 4.1G and 4.1B genes originated. This work will encourage further study on the structure-activity of invertebrate 4.1 protein and its interacting proteins.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/srep02873</identifier><identifier>PMID: 24096627</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/337 ; 631/45/612/1228 ; 631/601 ; 631/80/128 ; Actin ; Actins - metabolism ; Animals ; Binding Sites ; Cytoskeletal Proteins - chemistry ; Cytoskeletal Proteins - genetics ; Cytoskeletal Proteins - metabolism ; Gene Expression ; Gene Order ; Humanities and Social Sciences ; Invertebrates ; Lancelets - genetics ; Lancelets - metabolism ; multidisciplinary ; Organ Specificity ; Phylogeny ; Protein 4.1 ; Protein Binding ; Protein structure ; Proteins ; Science ; Sequence Analysis, DNA ; Spectrin ; Spectrin - metabolism ; Vertebrates</subject><ispartof>Scientific reports, 2013-10, Vol.3 (1), p.2873-2873, Article 2873</ispartof><rights>The Author(s) 2013</rights><rights>Copyright Nature Publishing Group Oct 2013</rights><rights>Copyright © 2013, Macmillan Publishers Limited. All rights reserved 2013 Macmillan Publishers Limited. All rights reserved</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-2cfb9526ea889a8cf18130b4aa4a744f85e691854fbffb971bfe3de01b3393023</citedby><cites>FETCH-LOGICAL-c438t-2cfb9526ea889a8cf18130b4aa4a744f85e691854fbffb971bfe3de01b3393023</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3791450/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3791450/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27924,27925,41120,42189,51576,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24096627$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Lixia</creatorcontrib><creatorcontrib>Wang, Yuan</creatorcontrib><creatorcontrib>Li, Zhaohe</creatorcontrib><creatorcontrib>Gao, Zhan</creatorcontrib><creatorcontrib>Zhang, Shicui</creatorcontrib><title>Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Vertebrate 4.1 proteins have a spectrin-actin-binding (SAB) domain, which is lacking in all the invertebrate 4.1 proteins indentified so far and it was therefore proposed that the SAB domain emerged with the advent of vertebrates during evolution. Here we demonstrated for the first time that amphioxus (an invertebrate chordate) protein 4.1, though lacking a recognizable SAB, was able to bind both spectrin and actin, with a binding capacity comparable to that of human protein 4.1. Detailed structure-activity analyses revealed that the unique domain U2/3 was a newly identified SAB-like domain capable of interacting with spectrin and actin, suggesting the presence of a “cryptic” SAB domain in amphioxus 4.1 protein. We also showed that amphioxus 4.1 protein gene was the common ancestor of vertebrate 4.1 protein genes, from which 4.1R, 4.1N, 4.1G and 4.1B genes originated. This work will encourage further study on the structure-activity of invertebrate 4.1 protein and its interacting proteins.</description><subject>631/337</subject><subject>631/45/612/1228</subject><subject>631/601</subject><subject>631/80/128</subject><subject>Actin</subject><subject>Actins - metabolism</subject><subject>Animals</subject><subject>Binding Sites</subject><subject>Cytoskeletal Proteins - chemistry</subject><subject>Cytoskeletal Proteins - genetics</subject><subject>Cytoskeletal Proteins - metabolism</subject><subject>Gene Expression</subject><subject>Gene Order</subject><subject>Humanities and Social Sciences</subject><subject>Invertebrates</subject><subject>Lancelets - genetics</subject><subject>Lancelets - metabolism</subject><subject>multidisciplinary</subject><subject>Organ Specificity</subject><subject>Phylogeny</subject><subject>Protein 4.1</subject><subject>Protein Binding</subject><subject>Protein structure</subject><subject>Proteins</subject><subject>Science</subject><subject>Sequence Analysis, DNA</subject><subject>Spectrin</subject><subject>Spectrin - metabolism</subject><subject>Vertebrates</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNplkV1rFDEUhoMottRe-Ack4I0Wps3XzCReCFJbWyh4o9chkz3ZTZlJxiQj1l9vlq3LWnORr_Pw5JAXodeUnFPC5UVOMBMme_4MHTMi2oZxxp4f7I_Qac73pI6WKUHVS3TEBFFdx_pjFK-XYIuPwYzYbkwytkDyv832CkeH5xQL-IDFOcWbOMUxrnE9mmne-PhryR_wZ3A--LDGBtv0MBdvcZ7BluRDU211HnxYbYHsC7xCL5wZM5w-rifo-_XVt8ub5u7rl9vLT3eNFVyWhlk3qJZ1YKRURlpHJeVkEMYI0wvhZAudorIVbnCV7OnggK-A0IFzxQnjJ-jjzjsvwwQrC6EkM-o5-cmkBx2N1_9Wgt_odfypea-oaEkVvHsUpPhjgVz05LOFcTQB4pI1FYIL2nWtqOjbJ-h9XFL90UpJJWkvSCsr9X5H2RRzDc3tm6FEb5PU-yQr--aw-z35N7cKnO2AXEthDengyf9sfwB2eKmA</recordid><startdate>20131007</startdate><enddate>20131007</enddate><creator>Wang, Lixia</creator><creator>Wang, Yuan</creator><creator>Li, Zhaohe</creator><creator>Gao, Zhan</creator><creator>Zhang, Shicui</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20131007</creationdate><title>Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site</title><author>Wang, Lixia ; Wang, Yuan ; Li, Zhaohe ; Gao, Zhan ; Zhang, Shicui</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c438t-2cfb9526ea889a8cf18130b4aa4a744f85e691854fbffb971bfe3de01b3393023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>631/337</topic><topic>631/45/612/1228</topic><topic>631/601</topic><topic>631/80/128</topic><topic>Actin</topic><topic>Actins - metabolism</topic><topic>Animals</topic><topic>Binding Sites</topic><topic>Cytoskeletal Proteins - chemistry</topic><topic>Cytoskeletal Proteins - genetics</topic><topic>Cytoskeletal Proteins - metabolism</topic><topic>Gene Expression</topic><topic>Gene Order</topic><topic>Humanities and Social Sciences</topic><topic>Invertebrates</topic><topic>Lancelets - genetics</topic><topic>Lancelets - metabolism</topic><topic>multidisciplinary</topic><topic>Organ Specificity</topic><topic>Phylogeny</topic><topic>Protein 4.1</topic><topic>Protein Binding</topic><topic>Protein structure</topic><topic>Proteins</topic><topic>Science</topic><topic>Sequence Analysis, DNA</topic><topic>Spectrin</topic><topic>Spectrin - metabolism</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Lixia</creatorcontrib><creatorcontrib>Wang, Yuan</creatorcontrib><creatorcontrib>Li, Zhaohe</creatorcontrib><creatorcontrib>Gao, Zhan</creatorcontrib><creatorcontrib>Zhang, Shicui</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Scientific reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Lixia</au><au>Wang, Yuan</au><au>Li, Zhaohe</au><au>Gao, Zhan</au><au>Zhang, Shicui</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2013-10-07</date><risdate>2013</risdate><volume>3</volume><issue>1</issue><spage>2873</spage><epage>2873</epage><pages>2873-2873</pages><artnum>2873</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>Vertebrate 4.1 proteins have a spectrin-actin-binding (SAB) domain, which is lacking in all the invertebrate 4.1 proteins indentified so far and it was therefore proposed that the SAB domain emerged with the advent of vertebrates during evolution. Here we demonstrated for the first time that amphioxus (an invertebrate chordate) protein 4.1, though lacking a recognizable SAB, was able to bind both spectrin and actin, with a binding capacity comparable to that of human protein 4.1. Detailed structure-activity analyses revealed that the unique domain U2/3 was a newly identified SAB-like domain capable of interacting with spectrin and actin, suggesting the presence of a “cryptic” SAB domain in amphioxus 4.1 protein. We also showed that amphioxus 4.1 protein gene was the common ancestor of vertebrate 4.1 protein genes, from which 4.1R, 4.1N, 4.1G and 4.1B genes originated. This work will encourage further study on the structure-activity of invertebrate 4.1 protein and its interacting proteins.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>24096627</pmid><doi>10.1038/srep02873</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2045-2322
ispartof Scientific reports, 2013-10, Vol.3 (1), p.2873-2873, Article 2873
issn 2045-2322
2045-2322
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3791450
source MEDLINE; DOAJ Directory of Open Access Journals; Springer Nature OA Free Journals; Nature Free; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry
subjects 631/337
631/45/612/1228
631/601
631/80/128
Actin
Actins - metabolism
Animals
Binding Sites
Cytoskeletal Proteins - chemistry
Cytoskeletal Proteins - genetics
Cytoskeletal Proteins - metabolism
Gene Expression
Gene Order
Humanities and Social Sciences
Invertebrates
Lancelets - genetics
Lancelets - metabolism
multidisciplinary
Organ Specificity
Phylogeny
Protein 4.1
Protein Binding
Protein structure
Proteins
Science
Sequence Analysis, DNA
Spectrin
Spectrin - metabolism
Vertebrates
title Functional characterization of protein 4.1 homolog in amphioxus: Defining a cryptic spectrin-actin-binding site
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-18T18%3A04%3A02IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Functional%20characterization%20of%20protein%204.1%20homolog%20in%20amphioxus:%20Defining%20a%20cryptic%20spectrin-actin-binding%20site&rft.jtitle=Scientific%20reports&rft.au=Wang,%20Lixia&rft.date=2013-10-07&rft.volume=3&rft.issue=1&rft.spage=2873&rft.epage=2873&rft.pages=2873-2873&rft.artnum=2873&rft.issn=2045-2322&rft.eissn=2045-2322&rft_id=info:doi/10.1038/srep02873&rft_dat=%3Cproquest_pubme%3E1898174058%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1898174058&rft_id=info:pmid/24096627&rfr_iscdi=true