Parallel Proteomic and Phosphoproteomic Analyses of Successive Stages of Maize Leaf Development

We performed large-scale, quantitative analyses of the maize (Zea mays) leaf proteome and phosphoproteome at four developmental stages. Exploiting the developmental gradient of maize leaves, we analyzed protein and phosphoprotein abundance as maize leaves transition from proliferative cell division...

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Veröffentlicht in:The Plant cell 2013-08, Vol.25 (8), p.2798-2812
Hauptverfasser: Facette, Michelle R., Shen, Zhouxin, Björnsdóttir, Fjola R., Briggs, Steven P., Smith, Laurie G.
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container_end_page 2812
container_issue 8
container_start_page 2798
container_title The Plant cell
container_volume 25
creator Facette, Michelle R.
Shen, Zhouxin
Björnsdóttir, Fjola R.
Briggs, Steven P.
Smith, Laurie G.
description We performed large-scale, quantitative analyses of the maize (Zea mays) leaf proteome and phosphoproteome at four developmental stages. Exploiting the developmental gradient of maize leaves, we analyzed protein and phosphoprotein abundance as maize leaves transition from proliferative cell division to differentiation to cell expansion and compared these developing zones to one another and the mature leaf blade. Comparison of the proteomes and phosphoproteomes suggests a key role for posttranslational regulation in developmental transitions. Analysis of proteins with cell walk- and hormone-related functions illustrates the utility of the data set and provides further insight into maize leaf development. We compare phosphorylation sites identified here to those previously identified in Arabidopsis thaliana. We also discuss instances where comparison of phosphorylated and unmodified peptides from a particular protein indicates tissue-specific phosphorylation. For example, comparison of unmodified and phosphorylated forms of PINFORMED1 (PIN1) suggests a tissue-specific difference in phosphorylation, which correlates with changes in PIN1 polarization in epidermal cells during development. Together, our data provide insights into regulatory processes underlying maize leaf development and provide a community resource cataloging the abundance and phosphorylation status of thousands of maize proteins at four leaf developmental stages.
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Exploiting the developmental gradient of maize leaves, we analyzed protein and phosphoprotein abundance as maize leaves transition from proliferative cell division to differentiation to cell expansion and compared these developing zones to one another and the mature leaf blade. Comparison of the proteomes and phosphoproteomes suggests a key role for posttranslational regulation in developmental transitions. Analysis of proteins with cell walk- and hormone-related functions illustrates the utility of the data set and provides further insight into maize leaf development. We compare phosphorylation sites identified here to those previously identified in Arabidopsis thaliana. We also discuss instances where comparison of phosphorylated and unmodified peptides from a particular protein indicates tissue-specific phosphorylation. For example, comparison of unmodified and phosphorylated forms of PINFORMED1 (PIN1) suggests a tissue-specific difference in phosphorylation, which correlates with changes in PIN1 polarization in epidermal cells during development. 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subjects Amino Acid Motifs
Amino Acid Sequence
Arabidopsis - metabolism
Cell Differentiation
Cell Division
Cell Proliferation
Cell Wall - metabolism
Cell walls
Chromatography, High Pressure Liquid
Corn
Datasets
Developmental biology
Indoleacetic Acids - metabolism
Large-Scale Biology
LARGE-SCALE BIOLOGY ARTICLE
Mass Spectrometry
Molecular Sequence Data
Phosphoproteins
Phosphoproteins - chemistry
Phosphoproteins - metabolism
Phosphorylation
Plant cells
Plant Leaves - cytology
Plant Leaves - growth & development
Plant Leaves - metabolism
Plant Proteins - chemistry
Plant Proteins - metabolism
Protein Kinases
Proteomes
Proteomics
Proteomics - methods
Zea mays - cytology
Zea mays - growth & development
Zea mays - metabolism
title Parallel Proteomic and Phosphoproteomic Analyses of Successive Stages of Maize Leaf Development
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