Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus
Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second...
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description | Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus.
The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced.
We found a common nonsynonymous variant m.15218A > G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A > G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A > G is damaging in effect.
We suggest that the m.15218A > G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus. |
doi_str_mv | 10.1186/1471-2350-14-73 |
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The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced.
We found a common nonsynonymous variant m.15218A > G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A > G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A > G is damaging in effect.
We suggest that the m.15218A > G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</description><identifier>ISSN: 1471-2350</identifier><identifier>ISSN: 1471-2156</identifier><identifier>EISSN: 1471-2350</identifier><identifier>EISSN: 1471-2156</identifier><identifier>DOI: 10.1186/1471-2350-14-73</identifier><identifier>PMID: 23870133</identifier><language>eng</language><publisher>England: BioMed Central</publisher><subject>Base Sequence ; Diabetes ; Diabetes Mellitus - genetics ; DNA, Mitochondrial - genetics ; Epilepsy ; Epilepsy - genetics ; Female ; Finland ; Genetic Variation ; Hearing loss ; Hearing Loss, Sensorineural - genetics ; Humans ; Male ; Mitochondria - genetics ; Mitochondrial Diseases - genetics ; Mitochondrial DNA ; Mutation ; Pedigree ; Phylogeny ; Polymorphism, Single Nucleotide ; Sequence Analysis, DNA</subject><ispartof>BMC genetics, 2013-07, Vol.14 (1), p.73-73, Article 73</ispartof><rights>2013 Soini et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</rights><rights>Copyright © 2013 Soini et al.; licensee BioMed Central Ltd. 2013 Soini et al.; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b513t-1100925d46c003d058a2ee7eff0e1707f0a23323991d8b8899c24d259d9562fd3</citedby><cites>FETCH-LOGICAL-b513t-1100925d46c003d058a2ee7eff0e1707f0a23323991d8b8899c24d259d9562fd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726289/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726289/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23870133$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Soini, Heidi K</creatorcontrib><creatorcontrib>Moilanen, Jukka S</creatorcontrib><creatorcontrib>Vilmi-Kerälä, Tiina</creatorcontrib><creatorcontrib>Finnilä, Saara</creatorcontrib><creatorcontrib>Majamaa, Kari</creatorcontrib><title>Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus</title><title>BMC genetics</title><addtitle>BMC Med Genet</addtitle><description>Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus.
The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced.
We found a common nonsynonymous variant m.15218A > G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A > G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A > G is damaging in effect.
We suggest that the m.15218A > G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</description><subject>Base Sequence</subject><subject>Diabetes</subject><subject>Diabetes Mellitus - genetics</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Epilepsy</subject><subject>Epilepsy - genetics</subject><subject>Female</subject><subject>Finland</subject><subject>Genetic Variation</subject><subject>Hearing loss</subject><subject>Hearing Loss, Sensorineural - genetics</subject><subject>Humans</subject><subject>Male</subject><subject>Mitochondria - genetics</subject><subject>Mitochondrial Diseases - genetics</subject><subject>Mitochondrial DNA</subject><subject>Mutation</subject><subject>Pedigree</subject><subject>Phylogeny</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Sequence Analysis, DNA</subject><issn>1471-2350</issn><issn>1471-2156</issn><issn>1471-2350</issn><issn>1471-2156</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNks9u1DAQxiMEoqVw5oYsceFAWv9JYudSaSm0IBW4wDlykknjKraD7SzqjStvwnPxJMyyZWkRSBwsjzy_-fxpZrLsMaOHjKnqiBWS5VyUNGdFLsWdbH_3cvdGvJc9iPGSUiaVEPezPS6UpEyI_ezbW5N8N3rXB6Mn8vLdiqw1hi4Re8hKztTq-5evx3jOiHHk1Dhn4khgNhPM8YrMOhlwKZLPoyejXgOxOkFwqBVgwuQaMGfS75LnJIKLPhgHS0BsBPzPXRBjZ22CRTHiA-mNbiFhrYVpMmmJD7N7g54iPLq-D7KPp68-nLzOz9-fvTlZnedtyUTKGaO05mVfVB2loqel0hxAwjBQYJLKgWouBBd1zXrVKlXXHS96XtZ9XVZ86MVBdrzVnZfWQt-hH3TZzMFYHa4ar01zO-PM2Fz4dSMkr7iqUeDFVqA1_h8CtzOdt81mUs1mUhg1UqDIs2sXwX9aIKbGmthhK7QDv0SkWC0qISj_H7SiRVFRhejTP9BLv2xm9ZOSnEpVSKSOtlQXfIwBhp13hvZw6_7i9snNnu34X2smfgB_uNZN</recordid><startdate>20130719</startdate><enddate>20130719</enddate><creator>Soini, Heidi K</creator><creator>Moilanen, Jukka S</creator><creator>Vilmi-Kerälä, Tiina</creator><creator>Finnilä, Saara</creator><creator>Majamaa, Kari</creator><general>BioMed Central</general><general>BioMed Central Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>7TK</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>20130719</creationdate><title>Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus</title><author>Soini, Heidi K ; Moilanen, Jukka S ; Vilmi-Kerälä, Tiina ; Finnilä, Saara ; Majamaa, Kari</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b513t-1100925d46c003d058a2ee7eff0e1707f0a23323991d8b8899c24d259d9562fd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Base Sequence</topic><topic>Diabetes</topic><topic>Diabetes Mellitus - genetics</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Epilepsy</topic><topic>Epilepsy - genetics</topic><topic>Female</topic><topic>Finland</topic><topic>Genetic Variation</topic><topic>Hearing loss</topic><topic>Hearing Loss, Sensorineural - genetics</topic><topic>Humans</topic><topic>Male</topic><topic>Mitochondria - genetics</topic><topic>Mitochondrial Diseases - genetics</topic><topic>Mitochondrial DNA</topic><topic>Mutation</topic><topic>Pedigree</topic><topic>Phylogeny</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Soini, Heidi K</creatorcontrib><creatorcontrib>Moilanen, Jukka S</creatorcontrib><creatorcontrib>Vilmi-Kerälä, Tiina</creatorcontrib><creatorcontrib>Finnilä, Saara</creatorcontrib><creatorcontrib>Majamaa, Kari</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>BMC genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Soini, Heidi K</au><au>Moilanen, Jukka S</au><au>Vilmi-Kerälä, Tiina</au><au>Finnilä, Saara</au><au>Majamaa, Kari</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus</atitle><jtitle>BMC genetics</jtitle><addtitle>BMC Med Genet</addtitle><date>2013-07-19</date><risdate>2013</risdate><volume>14</volume><issue>1</issue><spage>73</spage><epage>73</epage><pages>73-73</pages><artnum>73</artnum><issn>1471-2350</issn><issn>1471-2156</issn><eissn>1471-2350</eissn><eissn>1471-2156</eissn><abstract>Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus.
The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced.
We found a common nonsynonymous variant m.15218A > G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A > G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A > G is damaging in effect.
We suggest that the m.15218A > G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</abstract><cop>England</cop><pub>BioMed Central</pub><pmid>23870133</pmid><doi>10.1186/1471-2350-14-73</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Base Sequence Diabetes Diabetes Mellitus - genetics DNA, Mitochondrial - genetics Epilepsy Epilepsy - genetics Female Finland Genetic Variation Hearing loss Hearing Loss, Sensorineural - genetics Humans Male Mitochondria - genetics Mitochondrial Diseases - genetics Mitochondrial DNA Mutation Pedigree Phylogeny Polymorphism, Single Nucleotide Sequence Analysis, DNA |
title | Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus |
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