Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus

Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second...

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Veröffentlicht in:BMC genetics 2013-07, Vol.14 (1), p.73-73, Article 73
Hauptverfasser: Soini, Heidi K, Moilanen, Jukka S, Vilmi-Kerälä, Tiina, Finnilä, Saara, Majamaa, Kari
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container_title BMC genetics
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creator Soini, Heidi K
Moilanen, Jukka S
Vilmi-Kerälä, Tiina
Finnilä, Saara
Majamaa, Kari
description Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus. The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced. We found a common nonsynonymous variant m.15218A > G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A > G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A > G is damaging in effect. We suggest that the m.15218A > G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.
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Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus. The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced. We found a common nonsynonymous variant m.15218A &gt; G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A &gt; G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A &gt; G is damaging in effect. We suggest that the m.15218A &gt; G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</description><identifier>ISSN: 1471-2350</identifier><identifier>ISSN: 1471-2156</identifier><identifier>EISSN: 1471-2350</identifier><identifier>EISSN: 1471-2156</identifier><identifier>DOI: 10.1186/1471-2350-14-73</identifier><identifier>PMID: 23870133</identifier><language>eng</language><publisher>England: BioMed Central</publisher><subject>Base Sequence ; Diabetes ; Diabetes Mellitus - genetics ; DNA, Mitochondrial - genetics ; Epilepsy ; Epilepsy - genetics ; Female ; Finland ; Genetic Variation ; Hearing loss ; Hearing Loss, Sensorineural - genetics ; Humans ; Male ; Mitochondria - genetics ; Mitochondrial Diseases - genetics ; Mitochondrial DNA ; Mutation ; Pedigree ; Phylogeny ; Polymorphism, Single Nucleotide ; Sequence Analysis, DNA</subject><ispartof>BMC genetics, 2013-07, Vol.14 (1), p.73-73, Article 73</ispartof><rights>2013 Soini et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</rights><rights>Copyright © 2013 Soini et al.; licensee BioMed Central Ltd. 2013 Soini et al.; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b513t-1100925d46c003d058a2ee7eff0e1707f0a23323991d8b8899c24d259d9562fd3</citedby><cites>FETCH-LOGICAL-b513t-1100925d46c003d058a2ee7eff0e1707f0a23323991d8b8899c24d259d9562fd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726289/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726289/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23870133$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Soini, Heidi K</creatorcontrib><creatorcontrib>Moilanen, Jukka S</creatorcontrib><creatorcontrib>Vilmi-Kerälä, Tiina</creatorcontrib><creatorcontrib>Finnilä, Saara</creatorcontrib><creatorcontrib>Majamaa, Kari</creatorcontrib><title>Mitochondrial DNA variant m.15218A &gt; G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus</title><title>BMC genetics</title><addtitle>BMC Med Genet</addtitle><description>Mitochondrial diseases caused by mutations in mitochondrial DNA (mtDNA) affect tissues with high energy demand. Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus. The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced. We found a common nonsynonymous variant m.15218A &gt; G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A &gt; G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A &gt; G is damaging in effect. We suggest that the m.15218A &gt; G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</description><subject>Base Sequence</subject><subject>Diabetes</subject><subject>Diabetes Mellitus - genetics</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Epilepsy</subject><subject>Epilepsy - genetics</subject><subject>Female</subject><subject>Finland</subject><subject>Genetic Variation</subject><subject>Hearing loss</subject><subject>Hearing Loss, Sensorineural - genetics</subject><subject>Humans</subject><subject>Male</subject><subject>Mitochondria - genetics</subject><subject>Mitochondrial Diseases - genetics</subject><subject>Mitochondrial DNA</subject><subject>Mutation</subject><subject>Pedigree</subject><subject>Phylogeny</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Sequence Analysis, DNA</subject><issn>1471-2350</issn><issn>1471-2156</issn><issn>1471-2350</issn><issn>1471-2156</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNks9u1DAQxiMEoqVw5oYsceFAWv9JYudSaSm0IBW4wDlykknjKraD7SzqjStvwnPxJMyyZWkRSBwsjzy_-fxpZrLsMaOHjKnqiBWS5VyUNGdFLsWdbH_3cvdGvJc9iPGSUiaVEPezPS6UpEyI_ezbW5N8N3rXB6Mn8vLdiqw1hi4Re8hKztTq-5evx3jOiHHk1Dhn4khgNhPM8YrMOhlwKZLPoyejXgOxOkFwqBVgwuQaMGfS75LnJIKLPhgHS0BsBPzPXRBjZ22CRTHiA-mNbiFhrYVpMmmJD7N7g54iPLq-D7KPp68-nLzOz9-fvTlZnedtyUTKGaO05mVfVB2loqel0hxAwjBQYJLKgWouBBd1zXrVKlXXHS96XtZ9XVZ86MVBdrzVnZfWQt-hH3TZzMFYHa4ar01zO-PM2Fz4dSMkr7iqUeDFVqA1_h8CtzOdt81mUs1mUhg1UqDIs2sXwX9aIKbGmthhK7QDv0SkWC0qISj_H7SiRVFRhejTP9BLv2xm9ZOSnEpVSKSOtlQXfIwBhp13hvZw6_7i9snNnu34X2smfgB_uNZN</recordid><startdate>20130719</startdate><enddate>20130719</enddate><creator>Soini, Heidi K</creator><creator>Moilanen, Jukka S</creator><creator>Vilmi-Kerälä, Tiina</creator><creator>Finnilä, Saara</creator><creator>Majamaa, Kari</creator><general>BioMed Central</general><general>BioMed Central Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>7TK</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>20130719</creationdate><title>Mitochondrial DNA variant m.15218A &gt; G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus</title><author>Soini, Heidi K ; 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Epilepsy is one of the manifestations of mitochondrial dysfunction when the brain is affected. We have studied here 79 Finnish patients with epilepsy and who have maternal first- or second-degree relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus. The entire mtDNA was studied by using conformation sensitive gel electrophoresis and PCR fragments that differed in mobility were directly sequenced. We found a common nonsynonymous variant m.15218A &gt; G (p.T158A, MTCYB) that occurs in haplogroup U5a1 to be more frequent in patients with epilepsy. The m.15218A &gt; G variant was present in five patients with epilepsy and in four out of 403 population controls (p = 0.0077). This variant was present in two branches in the phylogenetic network constructed on the basis of mtDNA variation among the patients. Three algorithms predicted that m.15218A &gt; G is damaging in effect. We suggest that the m.15218A &gt; G variant is mildly deleterious and that mtDNA involvement should be considered in patients with epilepsy and who have a maternal history of epilepsy, sensorineural hearing impairment or diabetes mellitus.</abstract><cop>England</cop><pub>BioMed Central</pub><pmid>23870133</pmid><doi>10.1186/1471-2350-14-73</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
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subjects Base Sequence
Diabetes
Diabetes Mellitus - genetics
DNA, Mitochondrial - genetics
Epilepsy
Epilepsy - genetics
Female
Finland
Genetic Variation
Hearing loss
Hearing Loss, Sensorineural - genetics
Humans
Male
Mitochondria - genetics
Mitochondrial Diseases - genetics
Mitochondrial DNA
Mutation
Pedigree
Phylogeny
Polymorphism, Single Nucleotide
Sequence Analysis, DNA
title Mitochondrial DNA variant m.15218A > G in Finnish epilepsy patients who have maternal relatives with epilepsy, sensorineural hearing impairment or diabetes mellitus
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