The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism
The bacterial heat shock protein Hsp33 is a redox-regulated chaperone activated by oxidative stress. In response to oxidation, four cysteines within a Zn2+ binding C-terminal domain form two disulfide bonds with concomitant release of the metal. This leads to the formation of the biologically active...
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Veröffentlicht in: | Journal of applied physics 2004-10, Vol.12 (10), p.1901-1907 |
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creator | Janda, Izabela Devedjiev, Yancho Derewenda, Urszula Dauter, Zbigniew Bielnicki, Jakub Cooper, David R Graf, Paul C F Joachimiak, Andrzej Jakob, Ursula Derewenda, Zygmunt S |
description | The bacterial heat shock protein Hsp33 is a redox-regulated chaperone activated by oxidative stress. In response to oxidation, four cysteines within a Zn2+ binding C-terminal domain form two disulfide bonds with concomitant release of the metal. This leads to the formation of the biologically active Hsp33 dimer. The crystal structure of the N-terminal domain of the E. coli protein has been reported, but neither the structure of the Zn2+ binding motif nor the nature of its regulatory interaction with the rest of the protein are known. Here we report the crystal structure of the full-length B. subtilis Hsp33 in the reduced form. The structure of the N-terminal, dimerization domain is similar to that of the E. coli protein, although there is no domain swapping. The Zn2+ binding domain is clearly resolved showing the details of the tetrahedral coordination of Zn2+ by four thiolates. We propose a structure-based activation pathway for Hsp33. |
doi_str_mv | 10.1016/j.str.2004.08.003 |
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In response to oxidation, four cysteines within a Zn2+ binding C-terminal domain form two disulfide bonds with concomitant release of the metal. This leads to the formation of the biologically active Hsp33 dimer. The crystal structure of the N-terminal domain of the E. coli protein has been reported, but neither the structure of the Zn2+ binding motif nor the nature of its regulatory interaction with the rest of the protein are known. Here we report the crystal structure of the full-length B. subtilis Hsp33 in the reduced form. The structure of the N-terminal, dimerization domain is similar to that of the E. coli protein, although there is no domain swapping. The Zn2+ binding domain is clearly resolved showing the details of the tetrahedral coordination of Zn2+ by four thiolates. We propose a structure-based activation pathway for Hsp33.</description><identifier>ISSN: 0969-2126</identifier><identifier>ISSN: 0021-8979</identifier><identifier>EISSN: 1089-7550</identifier><identifier>EISSN: 1878-4186</identifier><identifier>DOI: 10.1016/j.str.2004.08.003</identifier><identifier>PMID: 15458638</identifier><language>eng</language><publisher>United States</publisher><subject>Amino Acid Sequence ; Bacillus subtilis - metabolism ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; Binding Sites ; BNL ; CRYSTAL STRUCTURE ; Crystallography ; Dimerization ; Entropy ; Escherichia coli Proteins - chemistry ; Heat-Shock Proteins - chemistry ; Heat-Shock Proteins - genetics ; Heat-Shock Proteins - metabolism ; MATERIALS SCIENCE ; Models, Molecular ; Molecular Chaperones - chemistry ; Molecular Chaperones - genetics ; Molecular Chaperones - metabolism ; Molecular Sequence Data ; Mutagenesis ; national synchrotron light source ; Oxidation-Reduction ; PHYSICS ; Protein Structure, Tertiary - genetics ; Sequence Homology, Amino Acid ; Zinc - chemistry ; Zinc - metabolism</subject><ispartof>Journal of applied physics, 2004-10, Vol.12 (10), p.1901-1907</ispartof><rights>Copyright 2004 Elsevier Ltd.</rights><rights>2004 Elsevier Ltd. All rights reserved 2004</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-ad87b9167db93af21d39366d9965100ad2a589c0cc40f36094a6e4defc32a7513</citedby><cites>FETCH-LOGICAL-c353t-ad87b9167db93af21d39366d9965100ad2a589c0cc40f36094a6e4defc32a7513</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15458638$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/884546$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Janda, Izabela</creatorcontrib><creatorcontrib>Devedjiev, Yancho</creatorcontrib><creatorcontrib>Derewenda, Urszula</creatorcontrib><creatorcontrib>Dauter, Zbigniew</creatorcontrib><creatorcontrib>Bielnicki, Jakub</creatorcontrib><creatorcontrib>Cooper, David R</creatorcontrib><creatorcontrib>Graf, Paul C F</creatorcontrib><creatorcontrib>Joachimiak, Andrzej</creatorcontrib><creatorcontrib>Jakob, Ursula</creatorcontrib><creatorcontrib>Derewenda, Zygmunt S</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source (NSLS)</creatorcontrib><title>The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism</title><title>Journal of applied physics</title><addtitle>Structure</addtitle><description>The bacterial heat shock protein Hsp33 is a redox-regulated chaperone activated by oxidative stress. In response to oxidation, four cysteines within a Zn2+ binding C-terminal domain form two disulfide bonds with concomitant release of the metal. This leads to the formation of the biologically active Hsp33 dimer. The crystal structure of the N-terminal domain of the E. coli protein has been reported, but neither the structure of the Zn2+ binding motif nor the nature of its regulatory interaction with the rest of the protein are known. Here we report the crystal structure of the full-length B. subtilis Hsp33 in the reduced form. The structure of the N-terminal, dimerization domain is similar to that of the E. coli protein, although there is no domain swapping. The Zn2+ binding domain is clearly resolved showing the details of the tetrahedral coordination of Zn2+ by four thiolates. We propose a structure-based activation pathway for Hsp33.</description><subject>Amino Acid Sequence</subject><subject>Bacillus subtilis - metabolism</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>Binding Sites</subject><subject>BNL</subject><subject>CRYSTAL STRUCTURE</subject><subject>Crystallography</subject><subject>Dimerization</subject><subject>Entropy</subject><subject>Escherichia coli Proteins - chemistry</subject><subject>Heat-Shock Proteins - chemistry</subject><subject>Heat-Shock Proteins - genetics</subject><subject>Heat-Shock Proteins - metabolism</subject><subject>MATERIALS SCIENCE</subject><subject>Models, Molecular</subject><subject>Molecular Chaperones - chemistry</subject><subject>Molecular Chaperones - genetics</subject><subject>Molecular Chaperones - metabolism</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis</subject><subject>national synchrotron light source</subject><subject>Oxidation-Reduction</subject><subject>PHYSICS</subject><subject>Protein Structure, Tertiary - genetics</subject><subject>Sequence Homology, Amino Acid</subject><subject>Zinc - chemistry</subject><subject>Zinc - metabolism</subject><issn>0969-2126</issn><issn>0021-8979</issn><issn>1089-7550</issn><issn>1878-4186</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkUFvFSEUhYmxsc_qD3BjcK0zXmDgDRuT2qht0sRN3bghDDA-XmZgAkyT_gV_tby-qu3qJpxzvtzLQegNgZYAER_3bS6ppQBdC30LwJ6hDYFeNlvO4TnagBSyoYSKU_Qy5z0AUA7wAp0S3vFesH6Dft_sHDbpLhc94UpbTVmTw3HEpQrJ2dU4-wH_DPR9M8Q1WDzGNP_VP7c4r0Pxk8_4Mi-MYbPTi0sxOKyr15eM_bxM3ujiY8iH8H1Qm-Jv79_w7Gom-Dy_QiejnrJ7_TDP0I-vX24uLpvr79-uLs6vG8M4K422_XaQRGztIJkeKbFMMiGslIITAG2p5r00YEwHIxMgOy1cZ91oGNVbTtgZ-nTkLuswO2tcKElPakl-1ulORe3VUyX4nfoVbxUTkgA9AN4dATEXr7LxpZ5gYgjOFNX3He9E9ZCjx6SYc3LjPz4BdShP7VX9bnUoT0Gvank18_bxYv8TD22xP2KVmNo</recordid><startdate>20041001</startdate><enddate>20041001</enddate><creator>Janda, Izabela</creator><creator>Devedjiev, Yancho</creator><creator>Derewenda, Urszula</creator><creator>Dauter, Zbigniew</creator><creator>Bielnicki, Jakub</creator><creator>Cooper, David R</creator><creator>Graf, Paul C F</creator><creator>Joachimiak, Andrzej</creator><creator>Jakob, Ursula</creator><creator>Derewenda, Zygmunt S</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>20041001</creationdate><title>The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism</title><author>Janda, Izabela ; Devedjiev, Yancho ; Derewenda, Urszula ; Dauter, Zbigniew ; Bielnicki, Jakub ; Cooper, David R ; Graf, Paul C F ; Joachimiak, Andrzej ; Jakob, Ursula ; Derewenda, Zygmunt S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-ad87b9167db93af21d39366d9965100ad2a589c0cc40f36094a6e4defc32a7513</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Amino Acid Sequence</topic><topic>Bacillus subtilis - metabolism</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>Binding Sites</topic><topic>BNL</topic><topic>CRYSTAL STRUCTURE</topic><topic>Crystallography</topic><topic>Dimerization</topic><topic>Entropy</topic><topic>Escherichia coli Proteins - chemistry</topic><topic>Heat-Shock Proteins - chemistry</topic><topic>Heat-Shock Proteins - genetics</topic><topic>Heat-Shock Proteins - metabolism</topic><topic>MATERIALS SCIENCE</topic><topic>Models, Molecular</topic><topic>Molecular Chaperones - chemistry</topic><topic>Molecular Chaperones - genetics</topic><topic>Molecular Chaperones - metabolism</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis</topic><topic>national synchrotron light source</topic><topic>Oxidation-Reduction</topic><topic>PHYSICS</topic><topic>Protein Structure, Tertiary - genetics</topic><topic>Sequence Homology, Amino Acid</topic><topic>Zinc - chemistry</topic><topic>Zinc - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Janda, Izabela</creatorcontrib><creatorcontrib>Devedjiev, Yancho</creatorcontrib><creatorcontrib>Derewenda, Urszula</creatorcontrib><creatorcontrib>Dauter, Zbigniew</creatorcontrib><creatorcontrib>Bielnicki, Jakub</creatorcontrib><creatorcontrib>Cooper, David R</creatorcontrib><creatorcontrib>Graf, Paul C F</creatorcontrib><creatorcontrib>Joachimiak, Andrzej</creatorcontrib><creatorcontrib>Jakob, Ursula</creatorcontrib><creatorcontrib>Derewenda, Zygmunt S</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source (NSLS)</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of applied physics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Janda, Izabela</au><au>Devedjiev, Yancho</au><au>Derewenda, Urszula</au><au>Dauter, Zbigniew</au><au>Bielnicki, Jakub</au><au>Cooper, David R</au><au>Graf, Paul C F</au><au>Joachimiak, Andrzej</au><au>Jakob, Ursula</au><au>Derewenda, Zygmunt S</au><aucorp>Brookhaven National Laboratory (BNL) National Synchrotron Light Source (NSLS)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism</atitle><jtitle>Journal of applied physics</jtitle><addtitle>Structure</addtitle><date>2004-10-01</date><risdate>2004</risdate><volume>12</volume><issue>10</issue><spage>1901</spage><epage>1907</epage><pages>1901-1907</pages><issn>0969-2126</issn><issn>0021-8979</issn><eissn>1089-7550</eissn><eissn>1878-4186</eissn><abstract>The bacterial heat shock protein Hsp33 is a redox-regulated chaperone activated by oxidative stress. In response to oxidation, four cysteines within a Zn2+ binding C-terminal domain form two disulfide bonds with concomitant release of the metal. This leads to the formation of the biologically active Hsp33 dimer. The crystal structure of the N-terminal domain of the E. coli protein has been reported, but neither the structure of the Zn2+ binding motif nor the nature of its regulatory interaction with the rest of the protein are known. Here we report the crystal structure of the full-length B. subtilis Hsp33 in the reduced form. The structure of the N-terminal, dimerization domain is similar to that of the E. coli protein, although there is no domain swapping. The Zn2+ binding domain is clearly resolved showing the details of the tetrahedral coordination of Zn2+ by four thiolates. We propose a structure-based activation pathway for Hsp33.</abstract><cop>United States</cop><pmid>15458638</pmid><doi>10.1016/j.str.2004.08.003</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Bacillus subtilis - metabolism Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - metabolism Binding Sites BNL CRYSTAL STRUCTURE Crystallography Dimerization Entropy Escherichia coli Proteins - chemistry Heat-Shock Proteins - chemistry Heat-Shock Proteins - genetics Heat-Shock Proteins - metabolism MATERIALS SCIENCE Models, Molecular Molecular Chaperones - chemistry Molecular Chaperones - genetics Molecular Chaperones - metabolism Molecular Sequence Data Mutagenesis national synchrotron light source Oxidation-Reduction PHYSICS Protein Structure, Tertiary - genetics Sequence Homology, Amino Acid Zinc - chemistry Zinc - metabolism |
title | The crystal structure of the reduced, Zn2+-bound form of the B. subtilis Hsp33 chaperone and its implications for the activation mechanism |
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