A detailed error analysis of 13 kernel methods for protein-protein interaction extraction

Kernel-based classification is the current state-of-the-art for extracting pairs of interacting proteins (PPIs) from free text. Various proposals have been put forward, which diverge especially in the specific kernel function, the type of input representation, and the feature sets. These proposals a...

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Veröffentlicht in:	BMC bioinformatics 2013-01, Vol.14 (1), p.12-12, Article 12
Hauptverfasser:	Tikk, Domonkos, Solt, Illés, Thomas, Philippe, Leser, Ulf
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Kernel functions Methods Protein Interaction Mapping - methods Protein research Protein-protein interactions Studies Syntax Trees (Graph theory)
Online-Zugang:	Volltext
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