Statistical platform to discern spatial and temporal coordination of endothelial sprouting
Many biological processes, including angiogenesis, involve intercellular feedback and temporal coordination, but inference of these relations is often drowned in low sample sizes or noisy population data. To address this issue, a methodology was developed to statistically study spatial lateral inhib...
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Veröffentlicht in: | Integrative biology (Cambridge) 2012-03, Vol.4 (3), p.292-300 |
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creator | Yuen, William W Du, Nan R Shvartsman, Dima Arany, Praveen R Lam, Henry Mooney, David J |
description | Many biological processes, including angiogenesis, involve intercellular feedback and temporal coordination, but inference of these relations is often drowned in low sample sizes or noisy population data. To address this issue, a methodology was developed to statistically study spatial lateral inhibition and temporal synchronization in one specific biological process, endothelial sprouting mediated by Notch signaling. Notch plays an essential role in the development of organized vasculature, but the effects of Notch on the temporal characteristics of angiogenesis are not well understood. Results from this study showed that Notch lateral inhibition operates at distances less than 31 μm. Furthermore, combining time lapse microscopy with an intraclass correlation model typically used to analyze family data showed intrinsic temporal synchronization among endothelial sprouts originating from the same microcarrier. Such synchronization was reduced with Notch inhibitors, but was enhanced with the addition of Notch ligands. These results indicate that Notch plays a critical role in the temporal regulation of angiogenesis, as well as spatial control, and this method of analysis will be of significant utility in studies of a variety of other biological processes. |
doi_str_mv | 10.1039/c2ib00057a |
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These results indicate that Notch plays a critical role in the temporal regulation of angiogenesis, as well as spatial control, and this method of analysis will be of significant utility in studies of a variety of other biological processes.</description><subject>angiogenesis</subject><subject>Endothelial Cells - cytology</subject><subject>Endothelial Cells - physiology</subject><subject>Human Umbilical Vein Endothelial Cells</subject><subject>Humans</subject><subject>Ligands</subject><subject>microscopy</subject><subject>Models, Biological</subject><subject>Models, Statistical</subject><subject>Neovascularization, Physiologic - drug effects</subject><subject>Receptors, Notch - antagonists & inhibitors</subject><subject>Receptors, Notch - physiology</subject><subject>Signal Transduction</subject><subject>Systems Biology</subject><issn>1757-9694</issn><issn>1757-9708</issn><issn>1757-9708</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kUlLBDEUhIMo7hd_gPRNEUbTWTsXQcQNBA_qxUvIZNFId9ImGcF_b4YZt4unvFDfK15RAOy18LiFWJxo5KcQQsrVCthsOeUTwWG3-jUzQTbAVs6vEDICIVkHGwjhtsOIboKn-6KKz8Vr1Tdjr4qLaWhKbIzP2qbQ5LHqVVPBNMUOY0z1o2NMxoeqxNBE19hgYnmx_RzMY4qz4sPzDlhzqs92d_lug8fLi4fz68nt3dXN-dntRJMWlolVosMUCUGdsEzhjhksEBOOUY4MdMa1WGlusNFGIWKIcVa4ti5ZJ6ac4m1wuvAdZ9PBGm1DqTfKMflBpQ8ZlZd_leBf5HN8l5hRQimsBgdLgxTfZjYXOczD970KNs6yFIgIRjqOKnn4L4lqEEIYF6yiRwtUp5hzsu77oBbKeW3yp7YK7_-O8I1-9YQ_AbMQlj0</recordid><startdate>201203</startdate><enddate>201203</enddate><creator>Yuen, William W</creator><creator>Du, Nan R</creator><creator>Shvartsman, Dima</creator><creator>Arany, Praveen R</creator><creator>Lam, Henry</creator><creator>Mooney, David J</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201203</creationdate><title>Statistical platform to discern spatial and temporal coordination of endothelial sprouting</title><author>Yuen, William W ; Du, Nan R ; Shvartsman, Dima ; Arany, Praveen R ; Lam, Henry ; Mooney, David J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c410t-ea98352995f9e6a386d39269f6572d0fdf13ac7d3dcda24d4dfe9f1983ef9b753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>angiogenesis</topic><topic>Endothelial Cells - cytology</topic><topic>Endothelial Cells - physiology</topic><topic>Human Umbilical Vein Endothelial Cells</topic><topic>Humans</topic><topic>Ligands</topic><topic>microscopy</topic><topic>Models, Biological</topic><topic>Models, Statistical</topic><topic>Neovascularization, Physiologic - drug effects</topic><topic>Receptors, Notch - antagonists & inhibitors</topic><topic>Receptors, Notch - physiology</topic><topic>Signal Transduction</topic><topic>Systems Biology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yuen, William W</creatorcontrib><creatorcontrib>Du, Nan R</creatorcontrib><creatorcontrib>Shvartsman, Dima</creatorcontrib><creatorcontrib>Arany, Praveen R</creatorcontrib><creatorcontrib>Lam, Henry</creatorcontrib><creatorcontrib>Mooney, David J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Integrative biology (Cambridge)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yuen, William W</au><au>Du, Nan R</au><au>Shvartsman, Dima</au><au>Arany, Praveen R</au><au>Lam, Henry</au><au>Mooney, David J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Statistical platform to discern spatial and temporal coordination of endothelial sprouting</atitle><jtitle>Integrative biology (Cambridge)</jtitle><addtitle>Integr Biol (Camb)</addtitle><date>2012-03</date><risdate>2012</risdate><volume>4</volume><issue>3</issue><spage>292</spage><epage>300</epage><pages>292-300</pages><issn>1757-9694</issn><issn>1757-9708</issn><eissn>1757-9708</eissn><abstract>Many biological processes, including angiogenesis, involve intercellular feedback and temporal coordination, but inference of these relations is often drowned in low sample sizes or noisy population data. To address this issue, a methodology was developed to statistically study spatial lateral inhibition and temporal synchronization in one specific biological process, endothelial sprouting mediated by Notch signaling. Notch plays an essential role in the development of organized vasculature, but the effects of Notch on the temporal characteristics of angiogenesis are not well understood. Results from this study showed that Notch lateral inhibition operates at distances less than 31 μm. Furthermore, combining time lapse microscopy with an intraclass correlation model typically used to analyze family data showed intrinsic temporal synchronization among endothelial sprouts originating from the same microcarrier. Such synchronization was reduced with Notch inhibitors, but was enhanced with the addition of Notch ligands. These results indicate that Notch plays a critical role in the temporal regulation of angiogenesis, as well as spatial control, and this method of analysis will be of significant utility in studies of a variety of other biological processes.</abstract><cop>England</cop><pmid>22318325</pmid><doi>10.1039/c2ib00057a</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | Oxford University Press Journals All Titles (1996-Current); MEDLINE; Royal Society Of Chemistry Journals 2008- |
subjects | angiogenesis Endothelial Cells - cytology Endothelial Cells - physiology Human Umbilical Vein Endothelial Cells Humans Ligands microscopy Models, Biological Models, Statistical Neovascularization, Physiologic - drug effects Receptors, Notch - antagonists & inhibitors Receptors, Notch - physiology Signal Transduction Systems Biology |
title | Statistical platform to discern spatial and temporal coordination of endothelial sprouting |
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