The MetaboLights repository: curation challenges in metabolomics
MetaboLights is the first general-purpose open-access curated repository for metabolomic studies, their raw experimental data and associated metadata, maintained by one of the major open-access data providers in molecular biology. Increases in the number of depositions, number of samples per study a...
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| Veröffentlicht in: | Database : the journal of biological databases and curation 2013, Vol.2013, p.bat029-bat029 |
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| container_title | Database : the journal of biological databases and curation |
| container_volume | 2013 |
| creator | Salek, Reza M Haug, Kenneth Conesa, Pablo Hastings, Janna Williams, Mark Mahendraker, Tejasvi Maguire, Eamonn González-Beltrán, Alejandra N Rocca-Serra, Philippe Sansone, Susanna-Assunta Steinbeck, Christoph |
| description | MetaboLights is the first general-purpose open-access curated repository for metabolomic studies, their raw experimental data and associated metadata, maintained by one of the major open-access data providers in molecular biology. Increases in the number of depositions, number of samples per study and the file size of data submitted to MetaboLights present a challenge for the objective of ensuring high-quality and standardized data in the context of diverse metabolomic workflows and data representations. Here, we describe the MetaboLights curation pipeline, its challenges and its practical application in quality control of complex data depositions. Database URL: http://www.ebi.ac.uk/metabolights. |
| doi_str_mv | 10.1093/database/bat029 |
| format | Article |
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| identifier | ISSN: 1758-0463 |
| ispartof | Database : the journal of biological databases and curation, 2013, Vol.2013, p.bat029-bat029 |
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| source | Oxford Journals Open Access Collection; MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
| subjects | Animals Data Collection Data Mining Databases as Topic Humans Metabolome Metabolomics - standards Original Research Design Statistics as Topic |
| title | The MetaboLights repository: curation challenges in metabolomics |
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