Towards a Comprehensive Catalog of Zebrafish Behavior 1.0 and Beyond
Zebrafish ( Danio rerio ) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screeni...
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creator | Kalueff, Allan V. Gebhardt, Michael Stewart, Adam Michael Cachat, Jonathan M. Brimmer, Mallorie Chawla, Jonathan S. Craddock, Cassandra Kyzar, Evan J. Roth, Andrew Landsman, Samuel Gaikwad, Siddharth Robinson, Kyle Baatrup, Erik Tierney, Keith Shamchuk, Angela Norton, William Miller, Noam Nicolson, Teresa Braubach, Oliver Gilman, Charles P. Pittman, Julian Rosemberg, Denis B. Gerlai, Robert Echevarria, David Lamb, Elisabeth Neuhauss, Stephan C.F. Weng, Wei Bally-Cuif, Laure Schneider, and the Zebrafish Neuroscience Research Consortium (ZNRC), Henning |
description | Zebrafish (
Danio rerio
) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish ‘
do
’, and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species. |
doi_str_mv | 10.1089/zeb.2012.0861 |
format | Article |
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Danio rerio
) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish ‘
do
’, and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.</description><identifier>ISSN: 1545-8547</identifier><identifier>EISSN: 1557-8542</identifier><identifier>DOI: 10.1089/zeb.2012.0861</identifier><identifier>PMID: 23590400</identifier><language>eng</language><publisher>United States: Mary Ann Liebert, Inc</publisher><subject>Animals ; Behavior, Animal ; Danio rerio ; Female ; Freshwater ; Larva - growth & development ; Larva - physiology ; Life Sciences ; Male ; Nervous System Physiological Phenomena ; Neurons and Cognition ; Reviews ; Sex Characteristics ; Terminology as Topic ; Zebrafish - growth & development ; Zebrafish - physiology</subject><ispartof>Zebrafish, 2013-03, Vol.10 (1), p.7-86</ispartof><rights>2013, Mary Ann Liebert, Inc.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright 2013, Mary Ann Liebert, Inc. 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c608t-59707e46c6216a5771b50ca4c16e8c8a6459316cafbda455667ab91706cf78063</citedby><cites>FETCH-LOGICAL-c608t-59707e46c6216a5771b50ca4c16e8c8a6459316cafbda455667ab91706cf78063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,315,781,785,886,27929,27930</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23590400$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-00850728$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Kalueff, Allan V.</creatorcontrib><creatorcontrib>Gebhardt, Michael</creatorcontrib><creatorcontrib>Stewart, Adam Michael</creatorcontrib><creatorcontrib>Cachat, Jonathan M.</creatorcontrib><creatorcontrib>Brimmer, Mallorie</creatorcontrib><creatorcontrib>Chawla, Jonathan S.</creatorcontrib><creatorcontrib>Craddock, Cassandra</creatorcontrib><creatorcontrib>Kyzar, Evan J.</creatorcontrib><creatorcontrib>Roth, Andrew</creatorcontrib><creatorcontrib>Landsman, Samuel</creatorcontrib><creatorcontrib>Gaikwad, Siddharth</creatorcontrib><creatorcontrib>Robinson, Kyle</creatorcontrib><creatorcontrib>Baatrup, Erik</creatorcontrib><creatorcontrib>Tierney, Keith</creatorcontrib><creatorcontrib>Shamchuk, Angela</creatorcontrib><creatorcontrib>Norton, William</creatorcontrib><creatorcontrib>Miller, Noam</creatorcontrib><creatorcontrib>Nicolson, Teresa</creatorcontrib><creatorcontrib>Braubach, Oliver</creatorcontrib><creatorcontrib>Gilman, Charles P.</creatorcontrib><creatorcontrib>Pittman, Julian</creatorcontrib><creatorcontrib>Rosemberg, Denis B.</creatorcontrib><creatorcontrib>Gerlai, Robert</creatorcontrib><creatorcontrib>Echevarria, David</creatorcontrib><creatorcontrib>Lamb, Elisabeth</creatorcontrib><creatorcontrib>Neuhauss, Stephan C.F.</creatorcontrib><creatorcontrib>Weng, Wei</creatorcontrib><creatorcontrib>Bally-Cuif, Laure</creatorcontrib><creatorcontrib>Schneider, and the Zebrafish Neuroscience Research Consortium (ZNRC), Henning</creatorcontrib><creatorcontrib>Zebrafish Neuroscience Research Consortium</creatorcontrib><title>Towards a Comprehensive Catalog of Zebrafish Behavior 1.0 and Beyond</title><title>Zebrafish</title><addtitle>Zebrafish</addtitle><description>Zebrafish (
Danio rerio
) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish ‘
do
’, and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.</description><subject>Animals</subject><subject>Behavior, Animal</subject><subject>Danio rerio</subject><subject>Female</subject><subject>Freshwater</subject><subject>Larva - growth & development</subject><subject>Larva - physiology</subject><subject>Life Sciences</subject><subject>Male</subject><subject>Nervous System Physiological Phenomena</subject><subject>Neurons and Cognition</subject><subject>Reviews</subject><subject>Sex Characteristics</subject><subject>Terminology as Topic</subject><subject>Zebrafish - growth & development</subject><subject>Zebrafish - physiology</subject><issn>1545-8547</issn><issn>1557-8542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU1v1DAQhi0EoqVw5IpyhEOW8bdzQWqXQpFW4lIuXKyJM2mCsvFiZxeVX99EWyrgAiePxo_f8ehh7CWHFQdXvf1J9UoAFytwhj9ip1xrWzqtxOOlVnqp7Ql7lvM3ACkrqZ6yEyF1BQrglL2_jj8wNbnAYh23u0Qdjbk_ULHGCYd4U8S2-Ep1wrbPXXFBHR76mAq-ggLHZm7cxrF5zp60OGR6cX-esS8fLq_XV-Xm88dP6_NNGQy4qdSVBUvKBCO4QW0trzUEVIEbcsGhUbqS3ARs6waV1sZYrCtuwYTWOjDyjL075u729ZaaQOOUcPC71G8x3fqIvf_zZuw7fxMPXhpRWWvngDfHgO6vZ1fnG7_0AJwGK9yBz-zr-2Epft9Tnvy2z4GGAUeK--y5NFZVyoL-D1TMFjSIZYXyiIYUc07UPnyDg1-E-lmoX4T6RejMv_p95Qf6l8EZkEdgaeM4Dj3VlKZ_xN4BKRqqmA</recordid><startdate>20130301</startdate><enddate>20130301</enddate><creator>Kalueff, Allan V.</creator><creator>Gebhardt, Michael</creator><creator>Stewart, Adam Michael</creator><creator>Cachat, Jonathan M.</creator><creator>Brimmer, Mallorie</creator><creator>Chawla, Jonathan S.</creator><creator>Craddock, Cassandra</creator><creator>Kyzar, Evan J.</creator><creator>Roth, Andrew</creator><creator>Landsman, Samuel</creator><creator>Gaikwad, Siddharth</creator><creator>Robinson, Kyle</creator><creator>Baatrup, Erik</creator><creator>Tierney, Keith</creator><creator>Shamchuk, Angela</creator><creator>Norton, William</creator><creator>Miller, Noam</creator><creator>Nicolson, Teresa</creator><creator>Braubach, Oliver</creator><creator>Gilman, Charles P.</creator><creator>Pittman, Julian</creator><creator>Rosemberg, Denis B.</creator><creator>Gerlai, Robert</creator><creator>Echevarria, David</creator><creator>Lamb, Elisabeth</creator><creator>Neuhauss, Stephan C.F.</creator><creator>Weng, Wei</creator><creator>Bally-Cuif, Laure</creator><creator>Schneider, and the Zebrafish Neuroscience Research Consortium (ZNRC), Henning</creator><general>Mary Ann Liebert, Inc</general><general>Mary Ann Liebert</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QG</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>1XC</scope><scope>5PM</scope></search><sort><creationdate>20130301</creationdate><title>Towards a Comprehensive Catalog of Zebrafish Behavior 1.0 and Beyond</title><author>Kalueff, Allan V. ; Gebhardt, Michael ; Stewart, Adam Michael ; Cachat, Jonathan M. ; Brimmer, Mallorie ; Chawla, Jonathan S. ; Craddock, Cassandra ; Kyzar, Evan J. ; Roth, Andrew ; Landsman, Samuel ; Gaikwad, Siddharth ; Robinson, Kyle ; Baatrup, Erik ; Tierney, Keith ; Shamchuk, Angela ; Norton, William ; Miller, Noam ; Nicolson, Teresa ; Braubach, Oliver ; Gilman, Charles P. ; Pittman, Julian ; Rosemberg, Denis B. ; Gerlai, Robert ; Echevarria, David ; Lamb, Elisabeth ; Neuhauss, Stephan C.F. ; Weng, Wei ; Bally-Cuif, Laure ; Schneider, and the Zebrafish Neuroscience Research Consortium (ZNRC), Henning</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c608t-59707e46c6216a5771b50ca4c16e8c8a6459316cafbda455667ab91706cf78063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animals</topic><topic>Behavior, Animal</topic><topic>Danio rerio</topic><topic>Female</topic><topic>Freshwater</topic><topic>Larva - 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Danio rerio
) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish ‘
do
’, and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.</abstract><cop>United States</cop><pub>Mary Ann Liebert, Inc</pub><pmid>23590400</pmid><doi>10.1089/zeb.2012.0861</doi><tpages>80</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Behavior, Animal Danio rerio Female Freshwater Larva - growth & development Larva - physiology Life Sciences Male Nervous System Physiological Phenomena Neurons and Cognition Reviews Sex Characteristics Terminology as Topic Zebrafish - growth & development Zebrafish - physiology |
title | Towards a Comprehensive Catalog of Zebrafish Behavior 1.0 and Beyond |
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