Immunoglobulin class-switch DNA recombination: induction, targeting and beyond
Key Points T cell-dependent and T cell-independent primary class-switch DNA recombination (CSR)-inducing stimuli induce activation-induced cytidine deaminase (AID) in a B cell differentiation stage-specific manner. AID expression is further enhanced by secondary CSR-inducing stimuli — namely, interl...
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description | Key Points
T cell-dependent and T cell-independent primary class-switch DNA recombination (CSR)-inducing stimuli induce activation-induced cytidine deaminase (AID) in a B cell differentiation stage-specific manner. AID expression is further enhanced by secondary CSR-inducing stimuli — namely, interleukin-4, transforming growth factor-β and interferon-γ — through interplay between transcription factors.
Targeting of the CSR machinery is made possible by the specific richness of 5′-AGCT-3′ repeats in all S regions and the high avidity of 14-3-3 adaptors for such repeats. Targeting is orchestrated by germline I
H
-S-C
H
transcription and epigenetic changes in the S regions that are to undergo recombination; these processes are induced by primary and secondary CSR-inducing stimuli.
Histone modifications and factors involved in germline I
H
-S-C
H
transcription have an important and active role in the recruitment of 14-3-3 adaptors and AID to S region DNA and in the stabilization of these CSR factors.
Proper adaptors (such as 14-3-3 proteins and replication protein A), which do not possess enzymatic activity, function as scaffold proteins for other CSR factors. In addition, enzymes (such as REV1) can function as scaffold elements in CSR.
Scaffold proteins that can directly interact with modified histones transduce crucial epigenetic information to AID and other enzymatic effectors of CSR.
Here, Paolo Casali and colleagues provide a comprehensive overview of the molecular mechanisms that drive immunoglobulin class-switch DNA recombination (CSR). They describe the signalling determinants of CSR specificity and the epigenetic modifications, transcriptional regulators and scaffold elements that direct the CSR machinery.
Class-switch DNA recombination (CSR) of the immunoglobulin heavy chain (
IGH
) locus is central to the maturation of the antibody response and crucially requires the cytidine deaminase AID. CSR involves changes in the chromatin state and the transcriptional activation of the
IGH
locus at the upstream and downstream switch (S) regions that are to undergo S–S DNA recombination. In addition, CSR involves the induction of AID expression and the targeting of CSR factors to S regions by 14-3-3 adaptors, and it is facilitated by the transcription machinery and by histone modifications. In this Review, we focus on recent advances regarding the induction and targeting of CSR and outline an integrated model of the assembly of macromolecular complexes that tra |
doi_str_mv | 10.1038/nri3216 |
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T cell-dependent and T cell-independent primary class-switch DNA recombination (CSR)-inducing stimuli induce activation-induced cytidine deaminase (AID) in a B cell differentiation stage-specific manner. AID expression is further enhanced by secondary CSR-inducing stimuli — namely, interleukin-4, transforming growth factor-β and interferon-γ — through interplay between transcription factors.
Targeting of the CSR machinery is made possible by the specific richness of 5′-AGCT-3′ repeats in all S regions and the high avidity of 14-3-3 adaptors for such repeats. Targeting is orchestrated by germline I
H
-S-C
H
transcription and epigenetic changes in the S regions that are to undergo recombination; these processes are induced by primary and secondary CSR-inducing stimuli.
Histone modifications and factors involved in germline I
H
-S-C
H
transcription have an important and active role in the recruitment of 14-3-3 adaptors and AID to S region DNA and in the stabilization of these CSR factors.
Proper adaptors (such as 14-3-3 proteins and replication protein A), which do not possess enzymatic activity, function as scaffold proteins for other CSR factors. In addition, enzymes (such as REV1) can function as scaffold elements in CSR.
Scaffold proteins that can directly interact with modified histones transduce crucial epigenetic information to AID and other enzymatic effectors of CSR.
Here, Paolo Casali and colleagues provide a comprehensive overview of the molecular mechanisms that drive immunoglobulin class-switch DNA recombination (CSR). They describe the signalling determinants of CSR specificity and the epigenetic modifications, transcriptional regulators and scaffold elements that direct the CSR machinery.
Class-switch DNA recombination (CSR) of the immunoglobulin heavy chain (
IGH
) locus is central to the maturation of the antibody response and crucially requires the cytidine deaminase AID. CSR involves changes in the chromatin state and the transcriptional activation of the
IGH
locus at the upstream and downstream switch (S) regions that are to undergo S–S DNA recombination. In addition, CSR involves the induction of AID expression and the targeting of CSR factors to S regions by 14-3-3 adaptors, and it is facilitated by the transcription machinery and by histone modifications. In this Review, we focus on recent advances regarding the induction and targeting of CSR and outline an integrated model of the assembly of macromolecular complexes that transduce crucial epigenetic information to enzymatic effectors of the CSR machinery.</description><identifier>ISSN: 1474-1733</identifier><identifier>EISSN: 1474-1741</identifier><identifier>DOI: 10.1038/nri3216</identifier><identifier>PMID: 22728528</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>14-3-3 protein ; 14-3-3 Proteins - metabolism ; 40 ; 631/250/2152/2498 ; 631/250/2502/2170 ; Activation-induced cytidine deaminase ; Animals ; Antibodies ; Antibody response ; Antigens ; Biomedical and Life Sciences ; Biomedicine ; Chromatin ; Class switching ; Cytidine deaminase ; Cytidine Deaminase - metabolism ; Deoxyribonucleic acid ; DNA ; DNA Breaks, Double-Stranded ; Epigenesis, Genetic ; epigenetics ; Genetic recombination ; Heavy chains ; Histones ; Humans ; Immunoglobulin Class Switching - genetics ; Immunoglobulin Class Switching - physiology ; Immunoglobulins ; Immunology ; Kinases ; Macromolecules ; Mice ; Models, Genetic ; Models, Immunological ; Pathogens ; Physiological aspects ; Recombination ; Recombination, Genetic ; review-article ; Transcription ; Transcription activation</subject><ispartof>Nature reviews. Immunology, 2012-07, Vol.12 (7), p.517-531</ispartof><rights>Springer Nature Limited 2012</rights><rights>COPYRIGHT 2012 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Jul 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c661t-6a67d9074e4b6c72573a63f788af736480d27a43d11475593fd4e05af2650bd13</citedby><cites>FETCH-LOGICAL-c661t-6a67d9074e4b6c72573a63f788af736480d27a43d11475593fd4e05af2650bd13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/nri3216$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/nri3216$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,777,781,882,27905,27906,41469,42538,51300</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22728528$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xu, Zhenming</creatorcontrib><creatorcontrib>Zan, Hong</creatorcontrib><creatorcontrib>Pone, Egest J.</creatorcontrib><creatorcontrib>Mai, Thach</creatorcontrib><creatorcontrib>Casali, Paolo</creatorcontrib><title>Immunoglobulin class-switch DNA recombination: induction, targeting and beyond</title><title>Nature reviews. Immunology</title><addtitle>Nat Rev Immunol</addtitle><addtitle>Nat Rev Immunol</addtitle><description>Key Points
T cell-dependent and T cell-independent primary class-switch DNA recombination (CSR)-inducing stimuli induce activation-induced cytidine deaminase (AID) in a B cell differentiation stage-specific manner. AID expression is further enhanced by secondary CSR-inducing stimuli — namely, interleukin-4, transforming growth factor-β and interferon-γ — through interplay between transcription factors.
Targeting of the CSR machinery is made possible by the specific richness of 5′-AGCT-3′ repeats in all S regions and the high avidity of 14-3-3 adaptors for such repeats. Targeting is orchestrated by germline I
H
-S-C
H
transcription and epigenetic changes in the S regions that are to undergo recombination; these processes are induced by primary and secondary CSR-inducing stimuli.
Histone modifications and factors involved in germline I
H
-S-C
H
transcription have an important and active role in the recruitment of 14-3-3 adaptors and AID to S region DNA and in the stabilization of these CSR factors.
Proper adaptors (such as 14-3-3 proteins and replication protein A), which do not possess enzymatic activity, function as scaffold proteins for other CSR factors. In addition, enzymes (such as REV1) can function as scaffold elements in CSR.
Scaffold proteins that can directly interact with modified histones transduce crucial epigenetic information to AID and other enzymatic effectors of CSR.
Here, Paolo Casali and colleagues provide a comprehensive overview of the molecular mechanisms that drive immunoglobulin class-switch DNA recombination (CSR). They describe the signalling determinants of CSR specificity and the epigenetic modifications, transcriptional regulators and scaffold elements that direct the CSR machinery.
Class-switch DNA recombination (CSR) of the immunoglobulin heavy chain (
IGH
) locus is central to the maturation of the antibody response and crucially requires the cytidine deaminase AID. CSR involves changes in the chromatin state and the transcriptional activation of the
IGH
locus at the upstream and downstream switch (S) regions that are to undergo S–S DNA recombination. In addition, CSR involves the induction of AID expression and the targeting of CSR factors to S regions by 14-3-3 adaptors, and it is facilitated by the transcription machinery and by histone modifications. In this Review, we focus on recent advances regarding the induction and targeting of CSR and outline an integrated model of the assembly of macromolecular complexes that transduce crucial epigenetic information to enzymatic effectors of the CSR machinery.</description><subject>14-3-3 protein</subject><subject>14-3-3 Proteins - metabolism</subject><subject>40</subject><subject>631/250/2152/2498</subject><subject>631/250/2502/2170</subject><subject>Activation-induced cytidine deaminase</subject><subject>Animals</subject><subject>Antibodies</subject><subject>Antibody response</subject><subject>Antigens</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Chromatin</subject><subject>Class switching</subject><subject>Cytidine deaminase</subject><subject>Cytidine Deaminase - metabolism</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA Breaks, Double-Stranded</subject><subject>Epigenesis, Genetic</subject><subject>epigenetics</subject><subject>Genetic recombination</subject><subject>Heavy chains</subject><subject>Histones</subject><subject>Humans</subject><subject>Immunoglobulin Class Switching - genetics</subject><subject>Immunoglobulin Class Switching - physiology</subject><subject>Immunoglobulins</subject><subject>Immunology</subject><subject>Kinases</subject><subject>Macromolecules</subject><subject>Mice</subject><subject>Models, Genetic</subject><subject>Models, Immunological</subject><subject>Pathogens</subject><subject>Physiological aspects</subject><subject>Recombination</subject><subject>Recombination, Genetic</subject><subject>review-article</subject><subject>Transcription</subject><subject>Transcription activation</subject><issn>1474-1733</issn><issn>1474-1741</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkluL1TAQx4so7kXxG0hB8AJ2be6pD8JhvR1YVvDyHNIk7cnSJrtJurrf3pQ9nj0VHyQPGTK_-TP5zxTFE1CfgBrxNy5YBAG9VxwCzHAFGAb3dzFCB8VRjBd1DWjOPCwOIGSQE8gPi_P1OE7O94Nvp8G6Ug0yxir-tEltyvfnqzIY5cfWOpmsd29L6_Sk5vB1mWToTbKuL6XTZWtuvNOPigedHKJ5vL2Pix8fP3w__Vydffm0Pl2dVYpSkCoqKdNNzbDBLVUMEoYkRR3jXHYMUcxrDZnESIP8BUIa1GlsaiI7SEndaoCOi3e3updTOxqtjEtBDuIy2FGGG-GlFcuMsxvR-2uBCCaYwyzwcisQ_NVkYhKjjcoMg3TGT1GAGmJKOWjw_6AQkoZDltFnf6EXfgouOzFToGlgw8kd1cvBCOs6n1tUs6hYwYZkLUznDk_-QeWjzWiVd6az-X1R8GpRkJlkfqVeTjGK9bevS_b5Hrsxckib6Idpnmxcgi9uQRV8jMF0O49BLebVE9vVy-TT_ZHsuD-7dudjzCnXm7BvzlLrN35s3UQ</recordid><startdate>20120701</startdate><enddate>20120701</enddate><creator>Xu, Zhenming</creator><creator>Zan, Hong</creator><creator>Pone, Egest J.</creator><creator>Mai, Thach</creator><creator>Casali, Paolo</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7QR</scope><scope>7RV</scope><scope>7T5</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>20120701</creationdate><title>Immunoglobulin class-switch DNA recombination: induction, targeting and beyond</title><author>Xu, Zhenming ; Zan, Hong ; Pone, Egest J. ; Mai, Thach ; Casali, Paolo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c661t-6a67d9074e4b6c72573a63f788af736480d27a43d11475593fd4e05af2650bd13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>14-3-3 protein</topic><topic>14-3-3 Proteins - metabolism</topic><topic>40</topic><topic>631/250/2152/2498</topic><topic>631/250/2502/2170</topic><topic>Activation-induced cytidine deaminase</topic><topic>Animals</topic><topic>Antibodies</topic><topic>Antibody response</topic><topic>Antigens</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Chromatin</topic><topic>Class switching</topic><topic>Cytidine deaminase</topic><topic>Cytidine Deaminase - metabolism</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA Breaks, Double-Stranded</topic><topic>Epigenesis, Genetic</topic><topic>epigenetics</topic><topic>Genetic recombination</topic><topic>Heavy chains</topic><topic>Histones</topic><topic>Humans</topic><topic>Immunoglobulin Class Switching - genetics</topic><topic>Immunoglobulin Class Switching - physiology</topic><topic>Immunoglobulins</topic><topic>Immunology</topic><topic>Kinases</topic><topic>Macromolecules</topic><topic>Mice</topic><topic>Models, Genetic</topic><topic>Models, Immunological</topic><topic>Pathogens</topic><topic>Physiological aspects</topic><topic>Recombination</topic><topic>Recombination, Genetic</topic><topic>review-article</topic><topic>Transcription</topic><topic>Transcription activation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xu, Zhenming</creatorcontrib><creatorcontrib>Zan, Hong</creatorcontrib><creatorcontrib>Pone, Egest J.</creatorcontrib><creatorcontrib>Mai, Thach</creatorcontrib><creatorcontrib>Casali, Paolo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Chemoreception Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Immunology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Nursing & Allied Health Premium</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature reviews. Immunology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xu, Zhenming</au><au>Zan, Hong</au><au>Pone, Egest J.</au><au>Mai, Thach</au><au>Casali, Paolo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Immunoglobulin class-switch DNA recombination: induction, targeting and beyond</atitle><jtitle>Nature reviews. Immunology</jtitle><stitle>Nat Rev Immunol</stitle><addtitle>Nat Rev Immunol</addtitle><date>2012-07-01</date><risdate>2012</risdate><volume>12</volume><issue>7</issue><spage>517</spage><epage>531</epage><pages>517-531</pages><issn>1474-1733</issn><eissn>1474-1741</eissn><abstract>Key Points
T cell-dependent and T cell-independent primary class-switch DNA recombination (CSR)-inducing stimuli induce activation-induced cytidine deaminase (AID) in a B cell differentiation stage-specific manner. AID expression is further enhanced by secondary CSR-inducing stimuli — namely, interleukin-4, transforming growth factor-β and interferon-γ — through interplay between transcription factors.
Targeting of the CSR machinery is made possible by the specific richness of 5′-AGCT-3′ repeats in all S regions and the high avidity of 14-3-3 adaptors for such repeats. Targeting is orchestrated by germline I
H
-S-C
H
transcription and epigenetic changes in the S regions that are to undergo recombination; these processes are induced by primary and secondary CSR-inducing stimuli.
Histone modifications and factors involved in germline I
H
-S-C
H
transcription have an important and active role in the recruitment of 14-3-3 adaptors and AID to S region DNA and in the stabilization of these CSR factors.
Proper adaptors (such as 14-3-3 proteins and replication protein A), which do not possess enzymatic activity, function as scaffold proteins for other CSR factors. In addition, enzymes (such as REV1) can function as scaffold elements in CSR.
Scaffold proteins that can directly interact with modified histones transduce crucial epigenetic information to AID and other enzymatic effectors of CSR.
Here, Paolo Casali and colleagues provide a comprehensive overview of the molecular mechanisms that drive immunoglobulin class-switch DNA recombination (CSR). They describe the signalling determinants of CSR specificity and the epigenetic modifications, transcriptional regulators and scaffold elements that direct the CSR machinery.
Class-switch DNA recombination (CSR) of the immunoglobulin heavy chain (
IGH
) locus is central to the maturation of the antibody response and crucially requires the cytidine deaminase AID. CSR involves changes in the chromatin state and the transcriptional activation of the
IGH
locus at the upstream and downstream switch (S) regions that are to undergo S–S DNA recombination. In addition, CSR involves the induction of AID expression and the targeting of CSR factors to S regions by 14-3-3 adaptors, and it is facilitated by the transcription machinery and by histone modifications. In this Review, we focus on recent advances regarding the induction and targeting of CSR and outline an integrated model of the assembly of macromolecular complexes that transduce crucial epigenetic information to enzymatic effectors of the CSR machinery.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>22728528</pmid><doi>10.1038/nri3216</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 14-3-3 protein 14-3-3 Proteins - metabolism 40 631/250/2152/2498 631/250/2502/2170 Activation-induced cytidine deaminase Animals Antibodies Antibody response Antigens Biomedical and Life Sciences Biomedicine Chromatin Class switching Cytidine deaminase Cytidine Deaminase - metabolism Deoxyribonucleic acid DNA DNA Breaks, Double-Stranded Epigenesis, Genetic epigenetics Genetic recombination Heavy chains Histones Humans Immunoglobulin Class Switching - genetics Immunoglobulin Class Switching - physiology Immunoglobulins Immunology Kinases Macromolecules Mice Models, Genetic Models, Immunological Pathogens Physiological aspects Recombination Recombination, Genetic review-article Transcription Transcription activation |
title | Immunoglobulin class-switch DNA recombination: induction, targeting and beyond |
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