Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway

The response of many neurons in the whisker somatosensory system depends on the direction in which a whisker is deflected. Although it is known that the spike count conveys information about this parameter, it is not known how important spike timing might be. The aim of this study was to compare neu...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of neurophysiology 2012-10, Vol.108 (7), p.1810-1821
Hauptverfasser: Storchi, Riccardo, Bale, Michael R, Biella, Gabriele E M, Petersen, Rasmus S
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1821
container_issue 7
container_start_page 1810
container_title Journal of neurophysiology
container_volume 108
creator Storchi, Riccardo
Bale, Michael R
Biella, Gabriele E M
Petersen, Rasmus S
description The response of many neurons in the whisker somatosensory system depends on the direction in which a whisker is deflected. Although it is known that the spike count conveys information about this parameter, it is not known how important spike timing might be. The aim of this study was to compare neural codes based on spike count and first-spike latency, respectively. We extracellularly recorded single units from either the rat trigeminal ganglion (primary sensory afferents) or ventroposteromedial (VPM) thalamic nucleus in response to deflection in different directions and quantified alternative neural codes using mutual information. We found that neurons were diverse: some (58% in ganglion, 32% in VPM) conveyed information only by spike count; others conveyed additional information by latency. An issue with latency coding is that latency is measured with respect to the time of stimulus onset, a quantity known to the experimenter but not directly to the subject's brain. We found a potential solution using the integrated population activity as an internal timing signal: in this way, 91% of the first-spike latency information could be recovered. Finally, we asked how well direction could be decoded. For large populations, spike count and latency codes performed similarly; for small ones, decoding was more accurate using the latency code. Our findings indicate that whisker deflection direction is more efficiently encoded by spike timing than by spike count. Spike timing decreases the population size necessary for reliable information transmission and may thereby bring significant advantages in both wiring and metabolic efficiency.
doi_str_mv 10.1152/jn.00921.2011
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3545005</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1082238786</sourcerecordid><originalsourceid>FETCH-LOGICAL-c453t-428d170851b053be89c64e5de41b86c8628b1e8826c42aabbbb3d8c8f7a01a8c3</originalsourceid><addsrcrecordid>eNpVkc1PwzAMxSMEgjE4ckU5culw0qbNLkho4ktC4gLnKE1dltEmI8mY9t9T2EDgi5_sn54tPULOGEwYE_xy4SYAU84mHBjbI6NhxjMmpnKfjAAGnUNVHZHjGBcAUAngh-SIc8lEAXxEPma-X-pgo3fUt7TTCZ3ZUO0aGgZNjW-se6WtDzTNkTY2oEl2C6_nNr5hoA223W5q3TcWV7XxIVmjOxp9r5OP6KIPG7rUab7WmxNy0Oou4umuj8nL7c3z7D57fLp7mF0_ZqYQecoKLhtWgRSsBpHXKKemLFA0WLBalkaWXNYMpeSlKbjW9VB5I41sKw1MS5OPydXWd7mqe2wMuhR0p5bB9jpslNdW_d84O1ev_kPlohAw3ByTi51B8O8rjEn1NhrsOu3Qr6JiIDnPZSXLAc22qAk-xoDt7xkG6isrtXDqOyv1ldXAn__97Zf-CSf_BEagkvc</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1082238786</pqid></control><display><type>article</type><title>Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway</title><source>MEDLINE</source><source>American Physiological Society</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Storchi, Riccardo ; Bale, Michael R ; Biella, Gabriele E M ; Petersen, Rasmus S</creator><creatorcontrib>Storchi, Riccardo ; Bale, Michael R ; Biella, Gabriele E M ; Petersen, Rasmus S</creatorcontrib><description>The response of many neurons in the whisker somatosensory system depends on the direction in which a whisker is deflected. Although it is known that the spike count conveys information about this parameter, it is not known how important spike timing might be. The aim of this study was to compare neural codes based on spike count and first-spike latency, respectively. We extracellularly recorded single units from either the rat trigeminal ganglion (primary sensory afferents) or ventroposteromedial (VPM) thalamic nucleus in response to deflection in different directions and quantified alternative neural codes using mutual information. We found that neurons were diverse: some (58% in ganglion, 32% in VPM) conveyed information only by spike count; others conveyed additional information by latency. An issue with latency coding is that latency is measured with respect to the time of stimulus onset, a quantity known to the experimenter but not directly to the subject's brain. We found a potential solution using the integrated population activity as an internal timing signal: in this way, 91% of the first-spike latency information could be recovered. Finally, we asked how well direction could be decoded. For large populations, spike count and latency codes performed similarly; for small ones, decoding was more accurate using the latency code. Our findings indicate that whisker deflection direction is more efficiently encoded by spike timing than by spike count. Spike timing decreases the population size necessary for reliable information transmission and may thereby bring significant advantages in both wiring and metabolic efficiency.</description><identifier>ISSN: 0022-3077</identifier><identifier>EISSN: 1522-1598</identifier><identifier>DOI: 10.1152/jn.00921.2011</identifier><identifier>PMID: 22815402</identifier><language>eng</language><publisher>United States: American Physiological Society</publisher><subject>Afferent Pathways - physiology ; Animals ; Evoked Potentials, Somatosensory ; Neurons - physiology ; Rats ; Rats, Wistar ; Reaction Time ; Trigeminal Ganglion - physiology ; Ventral Thalamic Nuclei - physiology ; Vibrissae - innervation</subject><ispartof>Journal of neurophysiology, 2012-10, Vol.108 (7), p.1810-1821</ispartof><rights>Copyright © 2012 the American Physiological Society 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c453t-428d170851b053be89c64e5de41b86c8628b1e8826c42aabbbb3d8c8f7a01a8c3</citedby><cites>FETCH-LOGICAL-c453t-428d170851b053be89c64e5de41b86c8628b1e8826c42aabbbb3d8c8f7a01a8c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,3026,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22815402$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Storchi, Riccardo</creatorcontrib><creatorcontrib>Bale, Michael R</creatorcontrib><creatorcontrib>Biella, Gabriele E M</creatorcontrib><creatorcontrib>Petersen, Rasmus S</creatorcontrib><title>Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway</title><title>Journal of neurophysiology</title><addtitle>J Neurophysiol</addtitle><description>The response of many neurons in the whisker somatosensory system depends on the direction in which a whisker is deflected. Although it is known that the spike count conveys information about this parameter, it is not known how important spike timing might be. The aim of this study was to compare neural codes based on spike count and first-spike latency, respectively. We extracellularly recorded single units from either the rat trigeminal ganglion (primary sensory afferents) or ventroposteromedial (VPM) thalamic nucleus in response to deflection in different directions and quantified alternative neural codes using mutual information. We found that neurons were diverse: some (58% in ganglion, 32% in VPM) conveyed information only by spike count; others conveyed additional information by latency. An issue with latency coding is that latency is measured with respect to the time of stimulus onset, a quantity known to the experimenter but not directly to the subject's brain. We found a potential solution using the integrated population activity as an internal timing signal: in this way, 91% of the first-spike latency information could be recovered. Finally, we asked how well direction could be decoded. For large populations, spike count and latency codes performed similarly; for small ones, decoding was more accurate using the latency code. Our findings indicate that whisker deflection direction is more efficiently encoded by spike timing than by spike count. Spike timing decreases the population size necessary for reliable information transmission and may thereby bring significant advantages in both wiring and metabolic efficiency.</description><subject>Afferent Pathways - physiology</subject><subject>Animals</subject><subject>Evoked Potentials, Somatosensory</subject><subject>Neurons - physiology</subject><subject>Rats</subject><subject>Rats, Wistar</subject><subject>Reaction Time</subject><subject>Trigeminal Ganglion - physiology</subject><subject>Ventral Thalamic Nuclei - physiology</subject><subject>Vibrissae - innervation</subject><issn>0022-3077</issn><issn>1522-1598</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc1PwzAMxSMEgjE4ckU5culw0qbNLkho4ktC4gLnKE1dltEmI8mY9t9T2EDgi5_sn54tPULOGEwYE_xy4SYAU84mHBjbI6NhxjMmpnKfjAAGnUNVHZHjGBcAUAngh-SIc8lEAXxEPma-X-pgo3fUt7TTCZ3ZUO0aGgZNjW-se6WtDzTNkTY2oEl2C6_nNr5hoA223W5q3TcWV7XxIVmjOxp9r5OP6KIPG7rUab7WmxNy0Oou4umuj8nL7c3z7D57fLp7mF0_ZqYQecoKLhtWgRSsBpHXKKemLFA0WLBalkaWXNYMpeSlKbjW9VB5I41sKw1MS5OPydXWd7mqe2wMuhR0p5bB9jpslNdW_d84O1ev_kPlohAw3ByTi51B8O8rjEn1NhrsOu3Qr6JiIDnPZSXLAc22qAk-xoDt7xkG6isrtXDqOyv1ldXAn__97Zf-CSf_BEagkvc</recordid><startdate>20121001</startdate><enddate>20121001</enddate><creator>Storchi, Riccardo</creator><creator>Bale, Michael R</creator><creator>Biella, Gabriele E M</creator><creator>Petersen, Rasmus S</creator><general>American Physiological Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20121001</creationdate><title>Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway</title><author>Storchi, Riccardo ; Bale, Michael R ; Biella, Gabriele E M ; Petersen, Rasmus S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c453t-428d170851b053be89c64e5de41b86c8628b1e8826c42aabbbb3d8c8f7a01a8c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Afferent Pathways - physiology</topic><topic>Animals</topic><topic>Evoked Potentials, Somatosensory</topic><topic>Neurons - physiology</topic><topic>Rats</topic><topic>Rats, Wistar</topic><topic>Reaction Time</topic><topic>Trigeminal Ganglion - physiology</topic><topic>Ventral Thalamic Nuclei - physiology</topic><topic>Vibrissae - innervation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Storchi, Riccardo</creatorcontrib><creatorcontrib>Bale, Michael R</creatorcontrib><creatorcontrib>Biella, Gabriele E M</creatorcontrib><creatorcontrib>Petersen, Rasmus S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of neurophysiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Storchi, Riccardo</au><au>Bale, Michael R</au><au>Biella, Gabriele E M</au><au>Petersen, Rasmus S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway</atitle><jtitle>Journal of neurophysiology</jtitle><addtitle>J Neurophysiol</addtitle><date>2012-10-01</date><risdate>2012</risdate><volume>108</volume><issue>7</issue><spage>1810</spage><epage>1821</epage><pages>1810-1821</pages><issn>0022-3077</issn><eissn>1522-1598</eissn><abstract>The response of many neurons in the whisker somatosensory system depends on the direction in which a whisker is deflected. Although it is known that the spike count conveys information about this parameter, it is not known how important spike timing might be. The aim of this study was to compare neural codes based on spike count and first-spike latency, respectively. We extracellularly recorded single units from either the rat trigeminal ganglion (primary sensory afferents) or ventroposteromedial (VPM) thalamic nucleus in response to deflection in different directions and quantified alternative neural codes using mutual information. We found that neurons were diverse: some (58% in ganglion, 32% in VPM) conveyed information only by spike count; others conveyed additional information by latency. An issue with latency coding is that latency is measured with respect to the time of stimulus onset, a quantity known to the experimenter but not directly to the subject's brain. We found a potential solution using the integrated population activity as an internal timing signal: in this way, 91% of the first-spike latency information could be recovered. Finally, we asked how well direction could be decoded. For large populations, spike count and latency codes performed similarly; for small ones, decoding was more accurate using the latency code. Our findings indicate that whisker deflection direction is more efficiently encoded by spike timing than by spike count. Spike timing decreases the population size necessary for reliable information transmission and may thereby bring significant advantages in both wiring and metabolic efficiency.</abstract><cop>United States</cop><pub>American Physiological Society</pub><pmid>22815402</pmid><doi>10.1152/jn.00921.2011</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0022-3077
ispartof Journal of neurophysiology, 2012-10, Vol.108 (7), p.1810-1821
issn 0022-3077
1522-1598
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3545005
source MEDLINE; American Physiological Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection
subjects Afferent Pathways - physiology
Animals
Evoked Potentials, Somatosensory
Neurons - physiology
Rats
Rats, Wistar
Reaction Time
Trigeminal Ganglion - physiology
Ventral Thalamic Nuclei - physiology
Vibrissae - innervation
title Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-10T21%3A50%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Comparison%20of%20latency%20and%20rate%20coding%20for%20the%20direction%20of%20whisker%20deflection%20in%20the%20subcortical%20somatosensory%20pathway&rft.jtitle=Journal%20of%20neurophysiology&rft.au=Storchi,%20Riccardo&rft.date=2012-10-01&rft.volume=108&rft.issue=7&rft.spage=1810&rft.epage=1821&rft.pages=1810-1821&rft.issn=0022-3077&rft.eissn=1522-1598&rft_id=info:doi/10.1152/jn.00921.2011&rft_dat=%3Cproquest_pubme%3E1082238786%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1082238786&rft_id=info:pmid/22815402&rfr_iscdi=true