Astrovirus in wild boars (Sus scrofa) in Hungary
The family Astroviridae consists of two genera, Avastrovirus and Mamastrovirus whose members are associated with gastroenteritis in avian and mammalian hosts, respectively. In this study, we report the first detection of astrovirus from fecal specimens of wild boars ( Sus scrofa ) using viral metage...
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| Veröffentlicht in: | Archives of virology 2012-06, Vol.157 (6), p.1143-1147 |
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| creator | Reuter, Gábor Nemes, Csaba Boros, Ákos Kapusinszky, Beatrix Delwart, Eric Pankovics, Péter |
| description | The family
Astroviridae
consists of two genera,
Avastrovirus
and
Mamastrovirus
whose members are associated with gastroenteritis in avian and mammalian hosts, respectively. In this study, we report the first detection of astrovirus from fecal specimens of wild boars (
Sus scrofa
) using viral metagenomics and complete genome sequencing. The wild boar astrovirus (WBAstV-1/2011/HUN, JQ340310) genome is 6707 nucleotide long and had 76%, 95% and 56% amino acid (aa) identity in the ORF1a (852aa), ORF1b (522aa) and ORF2 (845aa) regions, respectively, to porcine astrovirus 4 (PAstV-4, JF713713), the closest match. This study indicates that wild boar could be a reservoir for astroviruses. |
| doi_str_mv | 10.1007/s00705-012-1272-4 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3506007</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1020858717</sourcerecordid><originalsourceid>FETCH-LOGICAL-p300t-86866edae045407d34bca61f93ec956baa289b858863fb04ba29fa9a797b27933</originalsourceid><addsrcrecordid>eNqFkUtLw0AUhQdRbK3-ADcScFMX0TuPzGMjlKJWKLhQ18MkmdSUNKkzScV_74RWqW7czIV7Ps4c7kHoHMM1BhA3PjyQxIBJjIkgMTtAQ8woiaVQ8hANgQKLJQc5QCfeLwHCgibHaEAIVVLhZIhg4lvXbErX-aiso4-yyqO0Mc5H4-ew8plrCnPVS7OuXhj3eYqOClN5e7abI_R6f_cyncXzp4fH6WQerylAG36VnNvcWGAJA5FTlmaG40JRm6mEp8YQqVKZSMlpkQJLDVGFUUYokRKhKB2h263vuktXNs9s3TpT6bUrVyGFbkypfyt1-aYXzUbTBHi4SzAY7wxc895Z3-pV6TNbVaa2Tec1Zlxhxbmk_6NAIEQVuHe9_IMum87V4RKBwkKwhDMI1MV--J_U33cPANkCPkj1wrp9G92Xq7fl6lCu7svVjH4B9qKSmw</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1017745640</pqid></control><display><type>article</type><title>Astrovirus in wild boars (Sus scrofa) in Hungary</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Reuter, Gábor ; Nemes, Csaba ; Boros, Ákos ; Kapusinszky, Beatrix ; Delwart, Eric ; Pankovics, Péter</creator><creatorcontrib>Reuter, Gábor ; Nemes, Csaba ; Boros, Ákos ; Kapusinszky, Beatrix ; Delwart, Eric ; Pankovics, Péter</creatorcontrib><description>The family
Astroviridae
consists of two genera,
Avastrovirus
and
Mamastrovirus
whose members are associated with gastroenteritis in avian and mammalian hosts, respectively. In this study, we report the first detection of astrovirus from fecal specimens of wild boars (
Sus scrofa
) using viral metagenomics and complete genome sequencing. The wild boar astrovirus (WBAstV-1/2011/HUN, JQ340310) genome is 6707 nucleotide long and had 76%, 95% and 56% amino acid (aa) identity in the ORF1a (852aa), ORF1b (522aa) and ORF2 (845aa) regions, respectively, to porcine astrovirus 4 (PAstV-4, JF713713), the closest match. This study indicates that wild boar could be a reservoir for astroviruses.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-012-1272-4</identifier><identifier>PMID: 22398915</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Amino acids ; Animals ; Astroviridae ; Astroviridae - classification ; Astroviridae - genetics ; Astroviridae - isolation & purification ; Astroviridae Infections ; Astroviridae Infections - veterinary ; Astroviridae Infections - virology ; Astrovirus ; Avastrovirus ; Biomedical and Life Sciences ; Biomedicine ; birds ; Brief Report ; classification ; Feces ; Feces - virology ; Gastroenteritis ; genetics ; genome ; Genome, Viral ; Genomes ; Hogs ; hosts ; Hungary ; Infectious Diseases ; isolation & purification ; Mamastrovirus 3 ; mammals ; Medical Microbiology ; metagenomics ; Molecular Sequence Data ; nucleotide sequences ; Open Reading Frames ; Phylogeny ; Regions ; RNA polymerase ; Sus scrofa ; Swine ; Swine Diseases ; Swine Diseases - virology ; veterinary ; Virology ; wild boars</subject><ispartof>Archives of virology, 2012-06, Vol.157 (6), p.1143-1147</ispartof><rights>Springer-Verlag 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-p300t-86866edae045407d34bca61f93ec956baa289b858863fb04ba29fa9a797b27933</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-012-1272-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-012-1272-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22398915$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Reuter, Gábor</creatorcontrib><creatorcontrib>Nemes, Csaba</creatorcontrib><creatorcontrib>Boros, Ákos</creatorcontrib><creatorcontrib>Kapusinszky, Beatrix</creatorcontrib><creatorcontrib>Delwart, Eric</creatorcontrib><creatorcontrib>Pankovics, Péter</creatorcontrib><title>Astrovirus in wild boars (Sus scrofa) in Hungary</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>The family
Astroviridae
consists of two genera,
Avastrovirus
and
Mamastrovirus
whose members are associated with gastroenteritis in avian and mammalian hosts, respectively. In this study, we report the first detection of astrovirus from fecal specimens of wild boars (
Sus scrofa
) using viral metagenomics and complete genome sequencing. The wild boar astrovirus (WBAstV-1/2011/HUN, JQ340310) genome is 6707 nucleotide long and had 76%, 95% and 56% amino acid (aa) identity in the ORF1a (852aa), ORF1b (522aa) and ORF2 (845aa) regions, respectively, to porcine astrovirus 4 (PAstV-4, JF713713), the closest match. This study indicates that wild boar could be a reservoir for astroviruses.</description><subject>Amino acids</subject><subject>Animals</subject><subject>Astroviridae</subject><subject>Astroviridae - classification</subject><subject>Astroviridae - genetics</subject><subject>Astroviridae - isolation & purification</subject><subject>Astroviridae Infections</subject><subject>Astroviridae Infections - veterinary</subject><subject>Astroviridae Infections - virology</subject><subject>Astrovirus</subject><subject>Avastrovirus</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>birds</subject><subject>Brief Report</subject><subject>classification</subject><subject>Feces</subject><subject>Feces - virology</subject><subject>Gastroenteritis</subject><subject>genetics</subject><subject>genome</subject><subject>Genome, Viral</subject><subject>Genomes</subject><subject>Hogs</subject><subject>hosts</subject><subject>Hungary</subject><subject>Infectious Diseases</subject><subject>isolation & purification</subject><subject>Mamastrovirus 3</subject><subject>mammals</subject><subject>Medical Microbiology</subject><subject>metagenomics</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>Open Reading Frames</subject><subject>Phylogeny</subject><subject>Regions</subject><subject>RNA polymerase</subject><subject>Sus scrofa</subject><subject>Swine</subject><subject>Swine Diseases</subject><subject>Swine Diseases - virology</subject><subject>veterinary</subject><subject>Virology</subject><subject>wild boars</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqFkUtLw0AUhQdRbK3-ADcScFMX0TuPzGMjlKJWKLhQ18MkmdSUNKkzScV_74RWqW7czIV7Ps4c7kHoHMM1BhA3PjyQxIBJjIkgMTtAQ8woiaVQ8hANgQKLJQc5QCfeLwHCgibHaEAIVVLhZIhg4lvXbErX-aiso4-yyqO0Mc5H4-ew8plrCnPVS7OuXhj3eYqOClN5e7abI_R6f_cyncXzp4fH6WQerylAG36VnNvcWGAJA5FTlmaG40JRm6mEp8YQqVKZSMlpkQJLDVGFUUYokRKhKB2h263vuktXNs9s3TpT6bUrVyGFbkypfyt1-aYXzUbTBHi4SzAY7wxc895Z3-pV6TNbVaa2Tec1Zlxhxbmk_6NAIEQVuHe9_IMum87V4RKBwkKwhDMI1MV--J_U33cPANkCPkj1wrp9G92Xq7fl6lCu7svVjH4B9qKSmw</recordid><startdate>20120601</startdate><enddate>20120601</enddate><creator>Reuter, Gábor</creator><creator>Nemes, Csaba</creator><creator>Boros, Ákos</creator><creator>Kapusinszky, Beatrix</creator><creator>Delwart, Eric</creator><creator>Pankovics, Péter</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20120601</creationdate><title>Astrovirus in wild boars (Sus scrofa) in Hungary</title><author>Reuter, Gábor ; Nemes, Csaba ; Boros, Ákos ; Kapusinszky, Beatrix ; Delwart, Eric ; Pankovics, Péter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p300t-86866edae045407d34bca61f93ec956baa289b858863fb04ba29fa9a797b27933</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Amino acids</topic><topic>Animals</topic><topic>Astroviridae</topic><topic>Astroviridae - classification</topic><topic>Astroviridae - genetics</topic><topic>Astroviridae - isolation & purification</topic><topic>Astroviridae Infections</topic><topic>Astroviridae Infections - veterinary</topic><topic>Astroviridae Infections - virology</topic><topic>Astrovirus</topic><topic>Avastrovirus</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>birds</topic><topic>Brief Report</topic><topic>classification</topic><topic>Feces</topic><topic>Feces - virology</topic><topic>Gastroenteritis</topic><topic>genetics</topic><topic>genome</topic><topic>Genome, Viral</topic><topic>Genomes</topic><topic>Hogs</topic><topic>hosts</topic><topic>Hungary</topic><topic>Infectious Diseases</topic><topic>isolation & purification</topic><topic>Mamastrovirus 3</topic><topic>mammals</topic><topic>Medical Microbiology</topic><topic>metagenomics</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>Open Reading Frames</topic><topic>Phylogeny</topic><topic>Regions</topic><topic>RNA polymerase</topic><topic>Sus scrofa</topic><topic>Swine</topic><topic>Swine Diseases</topic><topic>Swine Diseases - virology</topic><topic>veterinary</topic><topic>Virology</topic><topic>wild boars</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Reuter, Gábor</creatorcontrib><creatorcontrib>Nemes, Csaba</creatorcontrib><creatorcontrib>Boros, Ákos</creatorcontrib><creatorcontrib>Kapusinszky, Beatrix</creatorcontrib><creatorcontrib>Delwart, Eric</creatorcontrib><creatorcontrib>Pankovics, Péter</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Archives of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reuter, Gábor</au><au>Nemes, Csaba</au><au>Boros, Ákos</au><au>Kapusinszky, Beatrix</au><au>Delwart, Eric</au><au>Pankovics, Péter</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Astrovirus in wild boars (Sus scrofa) in Hungary</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><addtitle>Arch Virol</addtitle><date>2012-06-01</date><risdate>2012</risdate><volume>157</volume><issue>6</issue><spage>1143</spage><epage>1147</epage><pages>1143-1147</pages><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>The family
Astroviridae
consists of two genera,
Avastrovirus
and
Mamastrovirus
whose members are associated with gastroenteritis in avian and mammalian hosts, respectively. In this study, we report the first detection of astrovirus from fecal specimens of wild boars (
Sus scrofa
) using viral metagenomics and complete genome sequencing. The wild boar astrovirus (WBAstV-1/2011/HUN, JQ340310) genome is 6707 nucleotide long and had 76%, 95% and 56% amino acid (aa) identity in the ORF1a (852aa), ORF1b (522aa) and ORF2 (845aa) regions, respectively, to porcine astrovirus 4 (PAstV-4, JF713713), the closest match. This study indicates that wild boar could be a reservoir for astroviruses.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>22398915</pmid><doi>10.1007/s00705-012-1272-4</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| issn | 0304-8608 1432-8798 |
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| source | MEDLINE; SpringerLink Journals - AutoHoldings |
| subjects | Amino acids Animals Astroviridae Astroviridae - classification Astroviridae - genetics Astroviridae - isolation & purification Astroviridae Infections Astroviridae Infections - veterinary Astroviridae Infections - virology Astrovirus Avastrovirus Biomedical and Life Sciences Biomedicine birds Brief Report classification Feces Feces - virology Gastroenteritis genetics genome Genome, Viral Genomes Hogs hosts Hungary Infectious Diseases isolation & purification Mamastrovirus 3 mammals Medical Microbiology metagenomics Molecular Sequence Data nucleotide sequences Open Reading Frames Phylogeny Regions RNA polymerase Sus scrofa Swine Swine Diseases Swine Diseases - virology veterinary Virology wild boars |
| title | Astrovirus in wild boars (Sus scrofa) in Hungary |
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