Population genetics of the malaria vector Anopheles aconitus in China and Southeast Asia
► We investigated populations of Anopheles aconitus using mtDNA and rDNA sequences. ► The population in Sri Lanka of An. aconitus is considered a distinct subspecies. ► Clear population genetic structure is observed in China and Southeast Asia. ► The populations of An. aconitus passed through a rece...
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| Veröffentlicht in: | Infection, genetics and evolution genetics and evolution, 2012-12, Vol.12 (8), p.1958-1967 |
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| container_end_page | 1967 |
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| container_issue | 8 |
| container_start_page | 1958 |
| container_title | Infection, genetics and evolution |
| container_volume | 12 |
| creator | Chen, Bin Harbach, Ralph E. Walton, Catherine He, Zhengbo Zhong, Daibin Yan, Guiyun Butlin, Roger K. |
| description | ► We investigated populations of Anopheles aconitus using mtDNA and rDNA sequences. ► The population in Sri Lanka of An. aconitus is considered a distinct subspecies. ► Clear population genetic structure is observed in China and Southeast Asia. ► The populations of An. aconitus passed through a recent demographic expansion.
Anopheles aconitus is a well-known vector of malaria and is broadly distributed in the Oriental Region, yet there is no information on its population genetic characteristics. In this study, the genetic differentiation among populations was examined using 140 mtDNA COII sequences from 21 sites throughout Southern China, Myanmar, Vietnam, Thailand, Laos and Sri Lanka. The population in Sri Lanka has characteristic rDNA D3 and ITS2, mtDNA COII and ND5 haplotypes, and may be considered a distinct subspecies. Clear genetic structure was observed with highly significant genetic variation present among population groups in Southeast Asia. The greatest genetic diversity exists in Yunnan and Myanmar population groups. All population groups are significantly different from one another in pairwise Fst values, except Northern Thailand with Central Thailand. Mismatch distributions and extremely significant Fs values suggest that the populations passed through a recent demographic expansion. These patterns are discussed in relation to the likely biogeographic history of the region and compared to other Anopheles species. |
| doi_str_mv | 10.1016/j.meegid.2012.08.007 |
| format | Article |
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Anopheles aconitus is a well-known vector of malaria and is broadly distributed in the Oriental Region, yet there is no information on its population genetic characteristics. In this study, the genetic differentiation among populations was examined using 140 mtDNA COII sequences from 21 sites throughout Southern China, Myanmar, Vietnam, Thailand, Laos and Sri Lanka. The population in Sri Lanka has characteristic rDNA D3 and ITS2, mtDNA COII and ND5 haplotypes, and may be considered a distinct subspecies. Clear genetic structure was observed with highly significant genetic variation present among population groups in Southeast Asia. The greatest genetic diversity exists in Yunnan and Myanmar population groups. All population groups are significantly different from one another in pairwise Fst values, except Northern Thailand with Central Thailand. Mismatch distributions and extremely significant Fs values suggest that the populations passed through a recent demographic expansion. These patterns are discussed in relation to the likely biogeographic history of the region and compared to other Anopheles species.</description><identifier>ISSN: 1567-1348</identifier><identifier>EISSN: 1567-7257</identifier><identifier>DOI: 10.1016/j.meegid.2012.08.007</identifier><identifier>PMID: 22982161</identifier><language>eng</language><publisher>Kidlington: Elsevier B.V</publisher><subject>Animals ; Anopheles ; Anopheles - classification ; Anopheles - genetics ; Anopheles aconitus ; Asia, Southeastern ; Biological and medical sciences ; China ; classification ; Demographic expansion ; Electron Transport Complex IV ; Electron Transport Complex IV - genetics ; Epidemiology. Vaccinations ; Evolution, Molecular ; Female ; General aspects ; Genes, Insect ; Genetic Variation ; genetics ; Genetics, Population ; Haplotypes ; Human protozoal diseases ; Infectious diseases ; insect vectors ; Insect Vectors - classification ; Insect Vectors - genetics ; internal transcribed spacers ; Laos ; Malaria ; Malaria - transmission ; Medical sciences ; mitochondrial DNA ; mtDNA ; Myanmar ; Parasitic diseases ; Phylogeny ; population genetics ; Population structure ; Protozoal diseases ; rDNA ; ribosomal DNA ; Southeast Asia ; Sri Lanka ; Subspecies ; Thailand ; transmission ; Vietnam</subject><ispartof>Infection, genetics and evolution, 2012-12, Vol.12 (8), p.1958-1967</ispartof><rights>2012 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2012 Elsevier B.V. All rights reserved.</rights><rights>2012 Elsevier B.V. All rights reserved. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c550t-a320c6a15caa4ccf4bddade69a516234fc16edb6029783b96bbea2c0c3d10f8a3</citedby><cites>FETCH-LOGICAL-c550t-a320c6a15caa4ccf4bddade69a516234fc16edb6029783b96bbea2c0c3d10f8a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1567134812002766$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,776,780,881,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26617085$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22982161$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Bin</creatorcontrib><creatorcontrib>Harbach, Ralph E.</creatorcontrib><creatorcontrib>Walton, Catherine</creatorcontrib><creatorcontrib>He, Zhengbo</creatorcontrib><creatorcontrib>Zhong, Daibin</creatorcontrib><creatorcontrib>Yan, Guiyun</creatorcontrib><creatorcontrib>Butlin, Roger K.</creatorcontrib><title>Population genetics of the malaria vector Anopheles aconitus in China and Southeast Asia</title><title>Infection, genetics and evolution</title><addtitle>Infect Genet Evol</addtitle><description>► We investigated populations of Anopheles aconitus using mtDNA and rDNA sequences. ► The population in Sri Lanka of An. aconitus is considered a distinct subspecies. ► Clear population genetic structure is observed in China and Southeast Asia. ► The populations of An. aconitus passed through a recent demographic expansion.
Anopheles aconitus is a well-known vector of malaria and is broadly distributed in the Oriental Region, yet there is no information on its population genetic characteristics. In this study, the genetic differentiation among populations was examined using 140 mtDNA COII sequences from 21 sites throughout Southern China, Myanmar, Vietnam, Thailand, Laos and Sri Lanka. The population in Sri Lanka has characteristic rDNA D3 and ITS2, mtDNA COII and ND5 haplotypes, and may be considered a distinct subspecies. Clear genetic structure was observed with highly significant genetic variation present among population groups in Southeast Asia. The greatest genetic diversity exists in Yunnan and Myanmar population groups. All population groups are significantly different from one another in pairwise Fst values, except Northern Thailand with Central Thailand. Mismatch distributions and extremely significant Fs values suggest that the populations passed through a recent demographic expansion. These patterns are discussed in relation to the likely biogeographic history of the region and compared to other Anopheles species.</description><subject>Animals</subject><subject>Anopheles</subject><subject>Anopheles - classification</subject><subject>Anopheles - genetics</subject><subject>Anopheles aconitus</subject><subject>Asia, Southeastern</subject><subject>Biological and medical sciences</subject><subject>China</subject><subject>classification</subject><subject>Demographic expansion</subject><subject>Electron Transport Complex IV</subject><subject>Electron Transport Complex IV - genetics</subject><subject>Epidemiology. Vaccinations</subject><subject>Evolution, Molecular</subject><subject>Female</subject><subject>General aspects</subject><subject>Genes, Insect</subject><subject>Genetic Variation</subject><subject>genetics</subject><subject>Genetics, Population</subject><subject>Haplotypes</subject><subject>Human protozoal diseases</subject><subject>Infectious diseases</subject><subject>insect vectors</subject><subject>Insect Vectors - classification</subject><subject>Insect Vectors - genetics</subject><subject>internal transcribed spacers</subject><subject>Laos</subject><subject>Malaria</subject><subject>Malaria - transmission</subject><subject>Medical sciences</subject><subject>mitochondrial DNA</subject><subject>mtDNA</subject><subject>Myanmar</subject><subject>Parasitic diseases</subject><subject>Phylogeny</subject><subject>population genetics</subject><subject>Population structure</subject><subject>Protozoal diseases</subject><subject>rDNA</subject><subject>ribosomal DNA</subject><subject>Southeast Asia</subject><subject>Sri Lanka</subject><subject>Subspecies</subject><subject>Thailand</subject><subject>transmission</subject><subject>Vietnam</subject><issn>1567-1348</issn><issn>1567-7257</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1r3DAQhk1padK0_6C0ugR6WXckW7J9KSxLvyDQQhroTYyl8a4Wr7SV7IX--yjsJmkvrS4S6HlHo3mK4jWHkgNX77fljmjtbCmAixLaEqB5UpxzqZpFI2Tz9HTmVd2eFS9S2gLwBkT7vDgTomsFV_y8-Pk97OcRJxc8W5OnyZnEwsCmDbEdjhgdsgOZKUS29GG_oZESQxO8m-bEnGerjfPI0Ft2HeacwjSxZXL4sng24Jjo1Wm_KG4-ffyx-rK4-vb562p5tTBSwrTASoBRyKVBrI0Z6t5atKQ6lFyJqh4MV2R7BaJr2qrvVN8TCgOmshyGFquL4sOx7n7ud2QN-SniqPfR7TD-1gGd_vvGu41eh4POY2llJ3KBd6cCMfyaKU1655KhcURPYU6aq0aA6jpR_x_lQgqZF89ofURNDClFGh464qDv_OmtPvrTd_40tDr7y7E3f_7mIXQvLAOXJwCTwXGI6I1Lj5xS2XErM_f2yA0YNK5jZm6u80sSAOqmrpvHwVG2c3AUdTKOvCHrYhaubXD_7vUWfNjFsA</recordid><startdate>20121201</startdate><enddate>20121201</enddate><creator>Chen, Bin</creator><creator>Harbach, Ralph E.</creator><creator>Walton, Catherine</creator><creator>He, Zhengbo</creator><creator>Zhong, Daibin</creator><creator>Yan, Guiyun</creator><creator>Butlin, Roger K.</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20121201</creationdate><title>Population genetics of the malaria vector Anopheles aconitus in China and Southeast Asia</title><author>Chen, Bin ; Harbach, Ralph E. ; Walton, Catherine ; He, Zhengbo ; Zhong, Daibin ; Yan, Guiyun ; Butlin, Roger K.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c550t-a320c6a15caa4ccf4bddade69a516234fc16edb6029783b96bbea2c0c3d10f8a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Anopheles</topic><topic>Anopheles - classification</topic><topic>Anopheles - genetics</topic><topic>Anopheles aconitus</topic><topic>Asia, Southeastern</topic><topic>Biological and medical sciences</topic><topic>China</topic><topic>classification</topic><topic>Demographic expansion</topic><topic>Electron Transport Complex IV</topic><topic>Electron Transport Complex IV - genetics</topic><topic>Epidemiology. Vaccinations</topic><topic>Evolution, Molecular</topic><topic>Female</topic><topic>General aspects</topic><topic>Genes, Insect</topic><topic>Genetic Variation</topic><topic>genetics</topic><topic>Genetics, Population</topic><topic>Haplotypes</topic><topic>Human protozoal diseases</topic><topic>Infectious diseases</topic><topic>insect vectors</topic><topic>Insect Vectors - classification</topic><topic>Insect Vectors - genetics</topic><topic>internal transcribed spacers</topic><topic>Laos</topic><topic>Malaria</topic><topic>Malaria - transmission</topic><topic>Medical sciences</topic><topic>mitochondrial DNA</topic><topic>mtDNA</topic><topic>Myanmar</topic><topic>Parasitic diseases</topic><topic>Phylogeny</topic><topic>population genetics</topic><topic>Population structure</topic><topic>Protozoal diseases</topic><topic>rDNA</topic><topic>ribosomal DNA</topic><topic>Southeast Asia</topic><topic>Sri Lanka</topic><topic>Subspecies</topic><topic>Thailand</topic><topic>transmission</topic><topic>Vietnam</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Bin</creatorcontrib><creatorcontrib>Harbach, Ralph E.</creatorcontrib><creatorcontrib>Walton, Catherine</creatorcontrib><creatorcontrib>He, Zhengbo</creatorcontrib><creatorcontrib>Zhong, Daibin</creatorcontrib><creatorcontrib>Yan, Guiyun</creatorcontrib><creatorcontrib>Butlin, Roger K.</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Infection, genetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Bin</au><au>Harbach, Ralph E.</au><au>Walton, Catherine</au><au>He, Zhengbo</au><au>Zhong, Daibin</au><au>Yan, Guiyun</au><au>Butlin, Roger K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Population genetics of the malaria vector Anopheles aconitus in China and Southeast Asia</atitle><jtitle>Infection, genetics and evolution</jtitle><addtitle>Infect Genet Evol</addtitle><date>2012-12-01</date><risdate>2012</risdate><volume>12</volume><issue>8</issue><spage>1958</spage><epage>1967</epage><pages>1958-1967</pages><issn>1567-1348</issn><eissn>1567-7257</eissn><abstract>► We investigated populations of Anopheles aconitus using mtDNA and rDNA sequences. ► The population in Sri Lanka of An. aconitus is considered a distinct subspecies. ► Clear population genetic structure is observed in China and Southeast Asia. ► The populations of An. aconitus passed through a recent demographic expansion.
Anopheles aconitus is a well-known vector of malaria and is broadly distributed in the Oriental Region, yet there is no information on its population genetic characteristics. In this study, the genetic differentiation among populations was examined using 140 mtDNA COII sequences from 21 sites throughout Southern China, Myanmar, Vietnam, Thailand, Laos and Sri Lanka. The population in Sri Lanka has characteristic rDNA D3 and ITS2, mtDNA COII and ND5 haplotypes, and may be considered a distinct subspecies. Clear genetic structure was observed with highly significant genetic variation present among population groups in Southeast Asia. The greatest genetic diversity exists in Yunnan and Myanmar population groups. All population groups are significantly different from one another in pairwise Fst values, except Northern Thailand with Central Thailand. Mismatch distributions and extremely significant Fs values suggest that the populations passed through a recent demographic expansion. These patterns are discussed in relation to the likely biogeographic history of the region and compared to other Anopheles species.</abstract><cop>Kidlington</cop><pub>Elsevier B.V</pub><pmid>22982161</pmid><doi>10.1016/j.meegid.2012.08.007</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Anopheles Anopheles - classification Anopheles - genetics Anopheles aconitus Asia, Southeastern Biological and medical sciences China classification Demographic expansion Electron Transport Complex IV Electron Transport Complex IV - genetics Epidemiology. Vaccinations Evolution, Molecular Female General aspects Genes, Insect Genetic Variation genetics Genetics, Population Haplotypes Human protozoal diseases Infectious diseases insect vectors Insect Vectors - classification Insect Vectors - genetics internal transcribed spacers Laos Malaria Malaria - transmission Medical sciences mitochondrial DNA mtDNA Myanmar Parasitic diseases Phylogeny population genetics Population structure Protozoal diseases rDNA ribosomal DNA Southeast Asia Sri Lanka Subspecies Thailand transmission Vietnam |
| title | Population genetics of the malaria vector Anopheles aconitus in China and Southeast Asia |
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