Draft Genome Sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, Isolated from the Gills of a Korean Rockfish, Sebastes schlegeli Hilgendorf, after High Hydrostatic Pressure Processing
A bacterium designated M1-1 was isolated from the gills of a Korean rockfish, Sebastes schlegeli Hilgendorf, after high hydrostatic pressure processing. Studies of 16S rRNA phylogeny and comparative genomics demonstrated that the isolate belongs to Staphylococcus saprophyticus subsp. saprophyticus....
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| Veröffentlicht in: | Journal of Bacteriology 2012-08, Vol.194 (16), p.4441-4442 |
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| container_title | Journal of Bacteriology |
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| creator | Kim, Bong-Soo Kim, Chong-Tai Park, Bang Heon Kwon, Sujin Cho, Yong-Jin Kim, Namsoo Kim, Chul-Jin Chun, Jongsik Kwak, Jangyul Maeng, Jin-Soo |
| description | A bacterium designated M1-1 was isolated from the gills of a Korean rockfish, Sebastes schlegeli Hilgendorf, after high hydrostatic pressure processing. Studies of 16S rRNA phylogeny and comparative genomics demonstrated that the isolate belongs to Staphylococcus saprophyticus subsp. saprophyticus. Here, we report the draft genome sequence of S. saprophyticus subsp. saprophyticus M1-1 (KACC 16562). |
| doi_str_mv | 10.1128/JB.00848-12 |
| format | Article |
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Studies of 16S rRNA phylogeny and comparative genomics demonstrated that the isolate belongs to Staphylococcus saprophyticus subsp. saprophyticus. Here, we report the draft genome sequence of S. saprophyticus subsp. saprophyticus M1-1 (KACC 16562).</description><identifier>ISSN: 0021-9193</identifier><identifier>EISSN: 1098-5530</identifier><identifier>EISSN: 1067-8832</identifier><identifier>DOI: 10.1128/JB.00848-12</identifier><identifier>PMID: 22843581</identifier><identifier>CODEN: JOBAAY</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Animals ; bacteria ; Bacteriology ; Biological and medical sciences ; Chordata - microbiology ; Comparative studies ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Fish ; Fundamental and applied biological sciences. Psychology ; genome ; Genome Announcements ; Genome, Bacterial ; Genomics ; gills ; Gills - microbiology ; high pressure treatment ; Hydrostatic Pressure ; Korea ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; nucleotide sequences ; Phylogenetics ; phylogeny ; Ribonucleic acid ; ribosomal RNA ; RNA ; Sebastes schlegeli ; Sebastes schlegelii ; Sequence Analysis, DNA ; Staphylococcus saprophyticus ; Staphylococcus saprophyticus - classification ; Staphylococcus saprophyticus - genetics ; Staphylococcus saprophyticus - isolation & purification</subject><ispartof>Journal of Bacteriology, 2012-08, Vol.194 (16), p.4441-4442</ispartof><rights>2015 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Aug 2012</rights><rights>Copyright © 2012, American Society for Microbiology. All Rights Reserved. 2012 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c523t-b934901702d90fd75dc21a875cfbf892e7eee2953bd9ec11c177b5dc009159043</citedby><cites>FETCH-LOGICAL-c523t-b934901702d90fd75dc21a875cfbf892e7eee2953bd9ec11c177b5dc009159043</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416236/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416236/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26259970$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22843581$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Bong-Soo</creatorcontrib><creatorcontrib>Kim, Chong-Tai</creatorcontrib><creatorcontrib>Park, Bang Heon</creatorcontrib><creatorcontrib>Kwon, Sujin</creatorcontrib><creatorcontrib>Cho, Yong-Jin</creatorcontrib><creatorcontrib>Kim, Namsoo</creatorcontrib><creatorcontrib>Kim, Chul-Jin</creatorcontrib><creatorcontrib>Chun, Jongsik</creatorcontrib><creatorcontrib>Kwak, Jangyul</creatorcontrib><creatorcontrib>Maeng, Jin-Soo</creatorcontrib><title>Draft Genome Sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, Isolated from the Gills of a Korean Rockfish, Sebastes schlegeli Hilgendorf, after High Hydrostatic Pressure Processing</title><title>Journal of Bacteriology</title><addtitle>J Bacteriol</addtitle><description>A bacterium designated M1-1 was isolated from the gills of a Korean rockfish, Sebastes schlegeli Hilgendorf, after high hydrostatic pressure processing. Studies of 16S rRNA phylogeny and comparative genomics demonstrated that the isolate belongs to Staphylococcus saprophyticus subsp. saprophyticus. Here, we report the draft genome sequence of S. saprophyticus subsp. saprophyticus M1-1 (KACC 16562).</description><subject>Animals</subject><subject>bacteria</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Chordata - microbiology</subject><subject>Comparative studies</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Fish</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genome</subject><subject>Genome Announcements</subject><subject>Genome, Bacterial</subject><subject>Genomics</subject><subject>gills</subject><subject>Gills - microbiology</subject><subject>high pressure treatment</subject><subject>Hydrostatic Pressure</subject><subject>Korea</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>Phylogenetics</subject><subject>phylogeny</subject><subject>Ribonucleic acid</subject><subject>ribosomal RNA</subject><subject>RNA</subject><subject>Sebastes schlegeli</subject><subject>Sebastes schlegelii</subject><subject>Sequence Analysis, DNA</subject><subject>Staphylococcus saprophyticus</subject><subject>Staphylococcus saprophyticus - classification</subject><subject>Staphylococcus saprophyticus - genetics</subject><subject>Staphylococcus saprophyticus - isolation & purification</subject><issn>0021-9193</issn><issn>1098-5530</issn><issn>1067-8832</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkk1v1DAQhiMEoqVw4g4WCAmJzeKx4yS-INECuy1FIJaeLceZbLIk8WInoP2H_Cy8HxTohZPH40fvfPiNoodApwAsf3lxOqU0T_IY2K3oGKjMYyE4vR0dU8ogliD5UXTP-xWlkCSC3Y2OGMsTLnI4jn6-cboayAx72yFZ4LcRe4PEVmQx6HW9aa2xxoyeeL12NiSGZncbC7-e3kh-gBgm5NzbVg9YksrZjgw1klnTtn4rqcl761D35LM1X6vG15NQsdB-wKBo6haX2DZk3rRL7EvrqgkJvaELmWVN5pvSWT_oUIt8cuj96DAE1oSw6Zf3ozuVbj0-OJwn0dW7t1_O5vHlx9n52evL2AjGh7iQPJEUMspKSasyE6VhoPNMmKqocskwQ0QmBS9KiQbAQJYVAaJUgpA04SfRq73ueiw6LA32g9OtWrum026jrG7Uvy99U6ul_a54AinjaRB4fhBwNmzbD6prvMG21T3a0StIs1ywlGfwf5RyygWlYos-vYGu7Oj6sIkdxVKa7ARf7CkTVukdVtd9A1VbM6mLU7UzkwIW6Ed_j3rN_nZPAJ4dAO2Nbiune9P4P1zKhJQZDdyTPVeHj_zROFTad2pVKJBJmFclSbIVe7yHKm2VXrogdLVgFMTWtpKmwH8BuTroqQ</recordid><startdate>20120801</startdate><enddate>20120801</enddate><creator>Kim, Bong-Soo</creator><creator>Kim, Chong-Tai</creator><creator>Park, Bang Heon</creator><creator>Kwon, Sujin</creator><creator>Cho, Yong-Jin</creator><creator>Kim, Namsoo</creator><creator>Kim, Chul-Jin</creator><creator>Chun, Jongsik</creator><creator>Kwak, Jangyul</creator><creator>Maeng, Jin-Soo</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope></search><sort><creationdate>20120801</creationdate><title>Draft Genome Sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, Isolated from the Gills of a Korean Rockfish, Sebastes schlegeli Hilgendorf, after High Hydrostatic Pressure Processing</title><author>Kim, Bong-Soo ; Kim, Chong-Tai ; Park, Bang Heon ; Kwon, Sujin ; Cho, Yong-Jin ; Kim, Namsoo ; Kim, Chul-Jin ; Chun, Jongsik ; Kwak, Jangyul ; Maeng, Jin-Soo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c523t-b934901702d90fd75dc21a875cfbf892e7eee2953bd9ec11c177b5dc009159043</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>bacteria</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Chordata - microbiology</topic><topic>Comparative studies</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>Fish</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genome</topic><topic>Genome Announcements</topic><topic>Genome, Bacterial</topic><topic>Genomics</topic><topic>gills</topic><topic>Gills - microbiology</topic><topic>high pressure treatment</topic><topic>Hydrostatic Pressure</topic><topic>Korea</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>Phylogenetics</topic><topic>phylogeny</topic><topic>Ribonucleic acid</topic><topic>ribosomal RNA</topic><topic>RNA</topic><topic>Sebastes schlegeli</topic><topic>Sebastes schlegelii</topic><topic>Sequence Analysis, DNA</topic><topic>Staphylococcus saprophyticus</topic><topic>Staphylococcus saprophyticus - classification</topic><topic>Staphylococcus saprophyticus - genetics</topic><topic>Staphylococcus saprophyticus - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Bong-Soo</creatorcontrib><creatorcontrib>Kim, Chong-Tai</creatorcontrib><creatorcontrib>Park, Bang Heon</creatorcontrib><creatorcontrib>Kwon, Sujin</creatorcontrib><creatorcontrib>Cho, Yong-Jin</creatorcontrib><creatorcontrib>Kim, Namsoo</creatorcontrib><creatorcontrib>Kim, Chul-Jin</creatorcontrib><creatorcontrib>Chun, Jongsik</creatorcontrib><creatorcontrib>Kwak, Jangyul</creatorcontrib><creatorcontrib>Maeng, Jin-Soo</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of Bacteriology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Bong-Soo</au><au>Kim, Chong-Tai</au><au>Park, Bang Heon</au><au>Kwon, Sujin</au><au>Cho, Yong-Jin</au><au>Kim, Namsoo</au><au>Kim, Chul-Jin</au><au>Chun, Jongsik</au><au>Kwak, Jangyul</au><au>Maeng, Jin-Soo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Draft Genome Sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, Isolated from the Gills of a Korean Rockfish, Sebastes schlegeli Hilgendorf, after High Hydrostatic Pressure Processing</atitle><jtitle>Journal of Bacteriology</jtitle><addtitle>J Bacteriol</addtitle><date>2012-08-01</date><risdate>2012</risdate><volume>194</volume><issue>16</issue><spage>4441</spage><epage>4442</epage><pages>4441-4442</pages><issn>0021-9193</issn><eissn>1098-5530</eissn><eissn>1067-8832</eissn><coden>JOBAAY</coden><abstract>A bacterium designated M1-1 was isolated from the gills of a Korean rockfish, Sebastes schlegeli Hilgendorf, after high hydrostatic pressure processing. Studies of 16S rRNA phylogeny and comparative genomics demonstrated that the isolate belongs to Staphylococcus saprophyticus subsp. saprophyticus. Here, we report the draft genome sequence of S. saprophyticus subsp. saprophyticus M1-1 (KACC 16562).</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>22843581</pmid><doi>10.1128/JB.00848-12</doi><tpages>2</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Journal of Bacteriology, 2012-08, Vol.194 (16), p.4441-4442 |
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| subjects | Animals bacteria Bacteriology Biological and medical sciences Chordata - microbiology Comparative studies DNA, Bacterial - chemistry DNA, Bacterial - genetics Fish Fundamental and applied biological sciences. Psychology genome Genome Announcements Genome, Bacterial Genomics gills Gills - microbiology high pressure treatment Hydrostatic Pressure Korea Microbiology Miscellaneous Molecular Sequence Data nucleotide sequences Phylogenetics phylogeny Ribonucleic acid ribosomal RNA RNA Sebastes schlegeli Sebastes schlegelii Sequence Analysis, DNA Staphylococcus saprophyticus Staphylococcus saprophyticus - classification Staphylococcus saprophyticus - genetics Staphylococcus saprophyticus - isolation & purification |
| title | Draft Genome Sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, Isolated from the Gills of a Korean Rockfish, Sebastes schlegeli Hilgendorf, after High Hydrostatic Pressure Processing |
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