Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population

The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects,...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Molecular vision 2012, Vol.18, p.2067-2075
Hauptverfasser: Mendoza-Reinoso, Veronica, Patil, Teja S, Guevara-Fujita, Maria L, Fernández, Silvia, Vargas, Enrique, Castillo-Herrera, Wilder, Perez-Grossmann, Rodolfo, Lizaraso-Caparó, Frank, Richards, Julia E, Fujita, Ricardo
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 2075
container_issue
container_start_page 2067
container_title Molecular vision
container_volume 18
creator Mendoza-Reinoso, Veronica
Patil, Teja S
Guevara-Fujita, Maria L
Fernández, Silvia
Vargas, Enrique
Castillo-Herrera, Wilder
Perez-Grossmann, Rodolfo
Lizaraso-Caparó, Frank
Richards, Julia E
Fujita, Ricardo
description The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening. We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls. The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3413416</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1033157697</sourcerecordid><originalsourceid>FETCH-LOGICAL-p299t-77f9fb28c09123c9b42aa1de821e82e5dc5ee3a2343f61d96fe81c53f697cbaf3</originalsourceid><addsrcrecordid>eNqNUUtLxDAQLqK4uvoXJEcvhTz6ykWQxResrgc9eCrTdLpG06S2zbr-e4Oust6EGeb1zcfHzE50wKikMU1FuruVT6LDYXihlLM0yfejCedFLnORHETqzq3QELA1ebXu3ZLbp8WM4NpZIkjrRxi1swPRNkAI1K1eY03usfcrHRpdr1voP4jr0MZglwbJ0oBXrgXSuc6br_WjaK8BM-DxJk6jx8uLh9l1PF9c3czO53HHpRzjPG9kU_FCUcm4ULJKOACrseAsOKa1ShEFcJGIJmO1zBosmEpDIXNVQSOm0dk3b-erFmuFduzBlBuRpQNd_p1Y_Vwu3aoUCQuWBYLTDUHv3jwOY9nqQaExYNH5oWQ0k5yGM_4HKgRL8yAtQE-2Zf3q-XmC-ARoSoXv</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1033157697</pqid></control><display><type>article</type><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</creator><creatorcontrib>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</creatorcontrib><description>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening. We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls. The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</description><identifier>ISSN: 1090-0535</identifier><identifier>EISSN: 1090-0535</identifier><identifier>PMID: 22879734</identifier><language>eng</language><publisher>United States: Molecular Vision</publisher><subject>Adolescent ; Aged ; Aged, 80 and over ; Base Sequence ; Case-Control Studies ; Cytoskeletal Proteins - genetics ; DNA Mutational Analysis ; Ethnic Groups ; Exons ; Eye Proteins - genetics ; Female ; Gel electrophoresis ; Gene deletion ; Genetic Association Studies ; Glaucoma ; Glaucoma, Open-Angle - ethnology ; Glaucoma, Open-Angle - genetics ; Glycoproteins - genetics ; Humans ; Male ; Middle Aged ; Missense mutation ; Molecular Sequence Data ; Mutation, Missense ; Nucleotides ; Pedigree ; Peru - epidemiology ; Point mutation ; Polymorphism, Single Nucleotide ; Risk ; Risk assessment ; Urban populations ; Vision</subject><ispartof>Molecular vision, 2012, Vol.18, p.2067-2075</ispartof><rights>Copyright © 2012 Molecular Vision. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413416/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413416/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,4024,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22879734$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mendoza-Reinoso, Veronica</creatorcontrib><creatorcontrib>Patil, Teja S</creatorcontrib><creatorcontrib>Guevara-Fujita, Maria L</creatorcontrib><creatorcontrib>Fernández, Silvia</creatorcontrib><creatorcontrib>Vargas, Enrique</creatorcontrib><creatorcontrib>Castillo-Herrera, Wilder</creatorcontrib><creatorcontrib>Perez-Grossmann, Rodolfo</creatorcontrib><creatorcontrib>Lizaraso-Caparó, Frank</creatorcontrib><creatorcontrib>Richards, Julia E</creatorcontrib><creatorcontrib>Fujita, Ricardo</creatorcontrib><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><title>Molecular vision</title><addtitle>Mol Vis</addtitle><description>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening. We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls. The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</description><subject>Adolescent</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Base Sequence</subject><subject>Case-Control Studies</subject><subject>Cytoskeletal Proteins - genetics</subject><subject>DNA Mutational Analysis</subject><subject>Ethnic Groups</subject><subject>Exons</subject><subject>Eye Proteins - genetics</subject><subject>Female</subject><subject>Gel electrophoresis</subject><subject>Gene deletion</subject><subject>Genetic Association Studies</subject><subject>Glaucoma</subject><subject>Glaucoma, Open-Angle - ethnology</subject><subject>Glaucoma, Open-Angle - genetics</subject><subject>Glycoproteins - genetics</subject><subject>Humans</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Missense mutation</subject><subject>Molecular Sequence Data</subject><subject>Mutation, Missense</subject><subject>Nucleotides</subject><subject>Pedigree</subject><subject>Peru - epidemiology</subject><subject>Point mutation</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Risk</subject><subject>Risk assessment</subject><subject>Urban populations</subject><subject>Vision</subject><issn>1090-0535</issn><issn>1090-0535</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUUtLxDAQLqK4uvoXJEcvhTz6ykWQxResrgc9eCrTdLpG06S2zbr-e4Oust6EGeb1zcfHzE50wKikMU1FuruVT6LDYXihlLM0yfejCedFLnORHETqzq3QELA1ebXu3ZLbp8WM4NpZIkjrRxi1swPRNkAI1K1eY03usfcrHRpdr1voP4jr0MZglwbJ0oBXrgXSuc6br_WjaK8BM-DxJk6jx8uLh9l1PF9c3czO53HHpRzjPG9kU_FCUcm4ULJKOACrseAsOKa1ShEFcJGIJmO1zBosmEpDIXNVQSOm0dk3b-erFmuFduzBlBuRpQNd_p1Y_Vwu3aoUCQuWBYLTDUHv3jwOY9nqQaExYNH5oWQ0k5yGM_4HKgRL8yAtQE-2Zf3q-XmC-ARoSoXv</recordid><startdate>2012</startdate><enddate>2012</enddate><creator>Mendoza-Reinoso, Veronica</creator><creator>Patil, Teja S</creator><creator>Guevara-Fujita, Maria L</creator><creator>Fernández, Silvia</creator><creator>Vargas, Enrique</creator><creator>Castillo-Herrera, Wilder</creator><creator>Perez-Grossmann, Rodolfo</creator><creator>Lizaraso-Caparó, Frank</creator><creator>Richards, Julia E</creator><creator>Fujita, Ricardo</creator><general>Molecular Vision</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>7TK</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>2012</creationdate><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><author>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p299t-77f9fb28c09123c9b42aa1de821e82e5dc5ee3a2343f61d96fe81c53f697cbaf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adolescent</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Base Sequence</topic><topic>Case-Control Studies</topic><topic>Cytoskeletal Proteins - genetics</topic><topic>DNA Mutational Analysis</topic><topic>Ethnic Groups</topic><topic>Exons</topic><topic>Eye Proteins - genetics</topic><topic>Female</topic><topic>Gel electrophoresis</topic><topic>Gene deletion</topic><topic>Genetic Association Studies</topic><topic>Glaucoma</topic><topic>Glaucoma, Open-Angle - ethnology</topic><topic>Glaucoma, Open-Angle - genetics</topic><topic>Glycoproteins - genetics</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Missense mutation</topic><topic>Molecular Sequence Data</topic><topic>Mutation, Missense</topic><topic>Nucleotides</topic><topic>Pedigree</topic><topic>Peru - epidemiology</topic><topic>Point mutation</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Risk</topic><topic>Risk assessment</topic><topic>Urban populations</topic><topic>Vision</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mendoza-Reinoso, Veronica</creatorcontrib><creatorcontrib>Patil, Teja S</creatorcontrib><creatorcontrib>Guevara-Fujita, Maria L</creatorcontrib><creatorcontrib>Fernández, Silvia</creatorcontrib><creatorcontrib>Vargas, Enrique</creatorcontrib><creatorcontrib>Castillo-Herrera, Wilder</creatorcontrib><creatorcontrib>Perez-Grossmann, Rodolfo</creatorcontrib><creatorcontrib>Lizaraso-Caparó, Frank</creatorcontrib><creatorcontrib>Richards, Julia E</creatorcontrib><creatorcontrib>Fujita, Ricardo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular vision</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mendoza-Reinoso, Veronica</au><au>Patil, Teja S</au><au>Guevara-Fujita, Maria L</au><au>Fernández, Silvia</au><au>Vargas, Enrique</au><au>Castillo-Herrera, Wilder</au><au>Perez-Grossmann, Rodolfo</au><au>Lizaraso-Caparó, Frank</au><au>Richards, Julia E</au><au>Fujita, Ricardo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</atitle><jtitle>Molecular vision</jtitle><addtitle>Mol Vis</addtitle><date>2012</date><risdate>2012</risdate><volume>18</volume><spage>2067</spage><epage>2075</epage><pages>2067-2075</pages><issn>1090-0535</issn><eissn>1090-0535</eissn><abstract>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening. We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls. The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</abstract><cop>United States</cop><pub>Molecular Vision</pub><pmid>22879734</pmid><tpages>9</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1090-0535
ispartof Molecular vision, 2012, Vol.18, p.2067-2075
issn 1090-0535
1090-0535
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3413416
source MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry
subjects Adolescent
Aged
Aged, 80 and over
Base Sequence
Case-Control Studies
Cytoskeletal Proteins - genetics
DNA Mutational Analysis
Ethnic Groups
Exons
Eye Proteins - genetics
Female
Gel electrophoresis
Gene deletion
Genetic Association Studies
Glaucoma
Glaucoma, Open-Angle - ethnology
Glaucoma, Open-Angle - genetics
Glycoproteins - genetics
Humans
Male
Middle Aged
Missense mutation
Molecular Sequence Data
Mutation, Missense
Nucleotides
Pedigree
Peru - epidemiology
Point mutation
Polymorphism, Single Nucleotide
Risk
Risk assessment
Urban populations
Vision
title Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-27T12%3A03%3A25IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Novel%20and%20known%20MYOC%20exon%203%20mutations%20in%20an%20admixed%20Peruvian%20primary%20open-angle%20glaucoma%20population&rft.jtitle=Molecular%20vision&rft.au=Mendoza-Reinoso,%20Veronica&rft.date=2012&rft.volume=18&rft.spage=2067&rft.epage=2075&rft.pages=2067-2075&rft.issn=1090-0535&rft.eissn=1090-0535&rft_id=info:doi/&rft_dat=%3Cproquest_pubme%3E1033157697%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1033157697&rft_id=info:pmid/22879734&rfr_iscdi=true