Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population
The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment. DNA samples from 414 unrelated Peruvian subjects,...
Gespeichert in:
Veröffentlicht in: | Molecular vision 2012, Vol.18, p.2067-2075 |
---|---|
Hauptverfasser: | , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 2075 |
---|---|
container_issue | |
container_start_page | 2067 |
container_title | Molecular vision |
container_volume | 18 |
creator | Mendoza-Reinoso, Veronica Patil, Teja S Guevara-Fujita, Maria L Fernández, Silvia Vargas, Enrique Castillo-Herrera, Wilder Perez-Grossmann, Rodolfo Lizaraso-Caparó, Frank Richards, Julia E Fujita, Ricardo |
description | The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment.
DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening.
We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls.
The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru. |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3413416</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1033157697</sourcerecordid><originalsourceid>FETCH-LOGICAL-p299t-77f9fb28c09123c9b42aa1de821e82e5dc5ee3a2343f61d96fe81c53f697cbaf3</originalsourceid><addsrcrecordid>eNqNUUtLxDAQLqK4uvoXJEcvhTz6ykWQxResrgc9eCrTdLpG06S2zbr-e4Oust6EGeb1zcfHzE50wKikMU1FuruVT6LDYXihlLM0yfejCedFLnORHETqzq3QELA1ebXu3ZLbp8WM4NpZIkjrRxi1swPRNkAI1K1eY03usfcrHRpdr1voP4jr0MZglwbJ0oBXrgXSuc6br_WjaK8BM-DxJk6jx8uLh9l1PF9c3czO53HHpRzjPG9kU_FCUcm4ULJKOACrseAsOKa1ShEFcJGIJmO1zBosmEpDIXNVQSOm0dk3b-erFmuFduzBlBuRpQNd_p1Y_Vwu3aoUCQuWBYLTDUHv3jwOY9nqQaExYNH5oWQ0k5yGM_4HKgRL8yAtQE-2Zf3q-XmC-ARoSoXv</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1033157697</pqid></control><display><type>article</type><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</creator><creatorcontrib>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</creatorcontrib><description>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment.
DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening.
We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls.
The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</description><identifier>ISSN: 1090-0535</identifier><identifier>EISSN: 1090-0535</identifier><identifier>PMID: 22879734</identifier><language>eng</language><publisher>United States: Molecular Vision</publisher><subject>Adolescent ; Aged ; Aged, 80 and over ; Base Sequence ; Case-Control Studies ; Cytoskeletal Proteins - genetics ; DNA Mutational Analysis ; Ethnic Groups ; Exons ; Eye Proteins - genetics ; Female ; Gel electrophoresis ; Gene deletion ; Genetic Association Studies ; Glaucoma ; Glaucoma, Open-Angle - ethnology ; Glaucoma, Open-Angle - genetics ; Glycoproteins - genetics ; Humans ; Male ; Middle Aged ; Missense mutation ; Molecular Sequence Data ; Mutation, Missense ; Nucleotides ; Pedigree ; Peru - epidemiology ; Point mutation ; Polymorphism, Single Nucleotide ; Risk ; Risk assessment ; Urban populations ; Vision</subject><ispartof>Molecular vision, 2012, Vol.18, p.2067-2075</ispartof><rights>Copyright © 2012 Molecular Vision. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413416/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413416/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,4024,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22879734$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mendoza-Reinoso, Veronica</creatorcontrib><creatorcontrib>Patil, Teja S</creatorcontrib><creatorcontrib>Guevara-Fujita, Maria L</creatorcontrib><creatorcontrib>Fernández, Silvia</creatorcontrib><creatorcontrib>Vargas, Enrique</creatorcontrib><creatorcontrib>Castillo-Herrera, Wilder</creatorcontrib><creatorcontrib>Perez-Grossmann, Rodolfo</creatorcontrib><creatorcontrib>Lizaraso-Caparó, Frank</creatorcontrib><creatorcontrib>Richards, Julia E</creatorcontrib><creatorcontrib>Fujita, Ricardo</creatorcontrib><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><title>Molecular vision</title><addtitle>Mol Vis</addtitle><description>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment.
DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening.
We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls.
The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</description><subject>Adolescent</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Base Sequence</subject><subject>Case-Control Studies</subject><subject>Cytoskeletal Proteins - genetics</subject><subject>DNA Mutational Analysis</subject><subject>Ethnic Groups</subject><subject>Exons</subject><subject>Eye Proteins - genetics</subject><subject>Female</subject><subject>Gel electrophoresis</subject><subject>Gene deletion</subject><subject>Genetic Association Studies</subject><subject>Glaucoma</subject><subject>Glaucoma, Open-Angle - ethnology</subject><subject>Glaucoma, Open-Angle - genetics</subject><subject>Glycoproteins - genetics</subject><subject>Humans</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Missense mutation</subject><subject>Molecular Sequence Data</subject><subject>Mutation, Missense</subject><subject>Nucleotides</subject><subject>Pedigree</subject><subject>Peru - epidemiology</subject><subject>Point mutation</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Risk</subject><subject>Risk assessment</subject><subject>Urban populations</subject><subject>Vision</subject><issn>1090-0535</issn><issn>1090-0535</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUUtLxDAQLqK4uvoXJEcvhTz6ykWQxResrgc9eCrTdLpG06S2zbr-e4Oust6EGeb1zcfHzE50wKikMU1FuruVT6LDYXihlLM0yfejCedFLnORHETqzq3QELA1ebXu3ZLbp8WM4NpZIkjrRxi1swPRNkAI1K1eY03usfcrHRpdr1voP4jr0MZglwbJ0oBXrgXSuc6br_WjaK8BM-DxJk6jx8uLh9l1PF9c3czO53HHpRzjPG9kU_FCUcm4ULJKOACrseAsOKa1ShEFcJGIJmO1zBosmEpDIXNVQSOm0dk3b-erFmuFduzBlBuRpQNd_p1Y_Vwu3aoUCQuWBYLTDUHv3jwOY9nqQaExYNH5oWQ0k5yGM_4HKgRL8yAtQE-2Zf3q-XmC-ARoSoXv</recordid><startdate>2012</startdate><enddate>2012</enddate><creator>Mendoza-Reinoso, Veronica</creator><creator>Patil, Teja S</creator><creator>Guevara-Fujita, Maria L</creator><creator>Fernández, Silvia</creator><creator>Vargas, Enrique</creator><creator>Castillo-Herrera, Wilder</creator><creator>Perez-Grossmann, Rodolfo</creator><creator>Lizaraso-Caparó, Frank</creator><creator>Richards, Julia E</creator><creator>Fujita, Ricardo</creator><general>Molecular Vision</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>7TK</scope><scope>7TM</scope><scope>5PM</scope></search><sort><creationdate>2012</creationdate><title>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</title><author>Mendoza-Reinoso, Veronica ; Patil, Teja S ; Guevara-Fujita, Maria L ; Fernández, Silvia ; Vargas, Enrique ; Castillo-Herrera, Wilder ; Perez-Grossmann, Rodolfo ; Lizaraso-Caparó, Frank ; Richards, Julia E ; Fujita, Ricardo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p299t-77f9fb28c09123c9b42aa1de821e82e5dc5ee3a2343f61d96fe81c53f697cbaf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adolescent</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Base Sequence</topic><topic>Case-Control Studies</topic><topic>Cytoskeletal Proteins - genetics</topic><topic>DNA Mutational Analysis</topic><topic>Ethnic Groups</topic><topic>Exons</topic><topic>Eye Proteins - genetics</topic><topic>Female</topic><topic>Gel electrophoresis</topic><topic>Gene deletion</topic><topic>Genetic Association Studies</topic><topic>Glaucoma</topic><topic>Glaucoma, Open-Angle - ethnology</topic><topic>Glaucoma, Open-Angle - genetics</topic><topic>Glycoproteins - genetics</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Missense mutation</topic><topic>Molecular Sequence Data</topic><topic>Mutation, Missense</topic><topic>Nucleotides</topic><topic>Pedigree</topic><topic>Peru - epidemiology</topic><topic>Point mutation</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Risk</topic><topic>Risk assessment</topic><topic>Urban populations</topic><topic>Vision</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mendoza-Reinoso, Veronica</creatorcontrib><creatorcontrib>Patil, Teja S</creatorcontrib><creatorcontrib>Guevara-Fujita, Maria L</creatorcontrib><creatorcontrib>Fernández, Silvia</creatorcontrib><creatorcontrib>Vargas, Enrique</creatorcontrib><creatorcontrib>Castillo-Herrera, Wilder</creatorcontrib><creatorcontrib>Perez-Grossmann, Rodolfo</creatorcontrib><creatorcontrib>Lizaraso-Caparó, Frank</creatorcontrib><creatorcontrib>Richards, Julia E</creatorcontrib><creatorcontrib>Fujita, Ricardo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular vision</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mendoza-Reinoso, Veronica</au><au>Patil, Teja S</au><au>Guevara-Fujita, Maria L</au><au>Fernández, Silvia</au><au>Vargas, Enrique</au><au>Castillo-Herrera, Wilder</au><au>Perez-Grossmann, Rodolfo</au><au>Lizaraso-Caparó, Frank</au><au>Richards, Julia E</au><au>Fujita, Ricardo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population</atitle><jtitle>Molecular vision</jtitle><addtitle>Mol Vis</addtitle><date>2012</date><risdate>2012</risdate><volume>18</volume><spage>2067</spage><epage>2075</epage><pages>2067-2075</pages><issn>1090-0535</issn><eissn>1090-0535</eissn><abstract>The aim of this study was to characterize a representative sample of the Peruvian population suffering open-angle glaucoma (OAG) with respect to the myocilin gene (MYOC) mutations, glaucoma phenotype, and ancestry for future glaucoma risk assessment.
DNA samples from 414 unrelated Peruvian subjects, including 205 open-angle glaucoma cases (10 juvenile glaucoma [JOAG], 19 normal-tension glaucoma [NTG], and 176 POAG) and 209 randomly sampled controls, were screened for nucleotide changes in MYOC exon 3 by conformational sensitive gel electrophoresis (CSGE) and mutation screening.
We identified a probable causative novel MYOC missense mutation, Gly326Ser, in one POAG case and found a consistent genotype-phenotype correlation in eight of his relatives. We also found the known causative MYOC mutation Trp286Arg in one JOAG case and one POAG case. A known causative single base MYOC deletion, T1357, was found in one POAG case. Two previously reported silent polymorphisms, Thr325Thr and Tyr347Tyr, were found in both the case and the control populations. A novel missense variant, Met476Arg, was identified in two unrelated controls.
The screening of exon 3 of MYOC in a representative sample of 205 independent POAG patients from Peru and 209 matched controls identified novel and previously reported mutations (both pathogenic and nonpathogenic) from other global regions. These results reflect the complex admixture of Amerindian and Old World ancestry in urban populations of Latin America, in general, and in Peru, in particular. It will be important to gather information about the ancestral origin of MYOC and other POAG gene mutations to develop screening panels and risk assessment for POAG in Peru.</abstract><cop>United States</cop><pub>Molecular Vision</pub><pmid>22879734</pmid><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1090-0535 |
ispartof | Molecular vision, 2012, Vol.18, p.2067-2075 |
issn | 1090-0535 1090-0535 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3413416 |
source | MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Adolescent Aged Aged, 80 and over Base Sequence Case-Control Studies Cytoskeletal Proteins - genetics DNA Mutational Analysis Ethnic Groups Exons Eye Proteins - genetics Female Gel electrophoresis Gene deletion Genetic Association Studies Glaucoma Glaucoma, Open-Angle - ethnology Glaucoma, Open-Angle - genetics Glycoproteins - genetics Humans Male Middle Aged Missense mutation Molecular Sequence Data Mutation, Missense Nucleotides Pedigree Peru - epidemiology Point mutation Polymorphism, Single Nucleotide Risk Risk assessment Urban populations Vision |
title | Novel and known MYOC exon 3 mutations in an admixed Peruvian primary open-angle glaucoma population |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-27T12%3A03%3A25IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Novel%20and%20known%20MYOC%20exon%203%20mutations%20in%20an%20admixed%20Peruvian%20primary%20open-angle%20glaucoma%20population&rft.jtitle=Molecular%20vision&rft.au=Mendoza-Reinoso,%20Veronica&rft.date=2012&rft.volume=18&rft.spage=2067&rft.epage=2075&rft.pages=2067-2075&rft.issn=1090-0535&rft.eissn=1090-0535&rft_id=info:doi/&rft_dat=%3Cproquest_pubme%3E1033157697%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1033157697&rft_id=info:pmid/22879734&rfr_iscdi=true |