Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene
► We investigated the mechanism by which the EHV-1 IEP inhibits its own promoter. ► The IEP represses transcription from its gene through the consensus IEP-binding site (IEBS). ► The short distance between the TATA box and the IEBS is important for IEP-mediated repression. ► The IEP efficiently modu...
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description | ► We investigated the mechanism by which the EHV-1 IEP inhibits its own promoter. ► The IEP represses transcription from its gene through the consensus IEP-binding site (IEBS). ► The short distance between the TATA box and the IEBS is important for IEP-mediated repression. ► The IEP efficiently modulates autorepression of its gene in a TATA box-dependent manner.
The immediate-early protein (IEP), the major regulatory protein encoded by the IE gene of equine herpesvirus 1 (EHV-1), plays a crucial role as both transcription activator and repressor during a productive lytic infection. To investigate the mechanism by which the EHV-1 IEP inhibits its own promoter, IE promoter-luciferase reporter plasmids containing wild-type and mutant IEP-binding site (IEBS) were constructed and used for luciferase reporter assays. The IEP inhibited transcription from its own promoter in the presence of a consensus IEBS (5′-ATCGT-3′) located near the transcription initiation site but did not inhibit when the consensus sequence was deleted. To determine whether the distance between the TATA box and the IEBS affects transcriptional repression, the IEBS was displaced from the original site by the insertion of synthetic DNA sequences. Luciferase reporter assays revealed that the IEP is able to repress its own promoter when the IEBS is located within 26-bp from the TATA box. We also found that the proper orientation and position of the IEBS were required for the repression by the IEP. Interestingly, the level of repression was significantly reduced when a consensus TATA sequence was deleted from the promoter region, indicating that the IEP efficiently inhibits its own promoter in a TATA box-dependent manner. Taken together, these results suggest that the EHV-1 IEP delicately modulates autoregulation of its gene through the consensus IEBS that is near the transcription initiation site and the TATA box. |
doi_str_mv | 10.1016/j.virusres.2012.01.005 |
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The immediate-early protein (IEP), the major regulatory protein encoded by the IE gene of equine herpesvirus 1 (EHV-1), plays a crucial role as both transcription activator and repressor during a productive lytic infection. To investigate the mechanism by which the EHV-1 IEP inhibits its own promoter, IE promoter-luciferase reporter plasmids containing wild-type and mutant IEP-binding site (IEBS) were constructed and used for luciferase reporter assays. The IEP inhibited transcription from its own promoter in the presence of a consensus IEBS (5′-ATCGT-3′) located near the transcription initiation site but did not inhibit when the consensus sequence was deleted. To determine whether the distance between the TATA box and the IEBS affects transcriptional repression, the IEBS was displaced from the original site by the insertion of synthetic DNA sequences. Luciferase reporter assays revealed that the IEP is able to repress its own promoter when the IEBS is located within 26-bp from the TATA box. We also found that the proper orientation and position of the IEBS were required for the repression by the IEP. Interestingly, the level of repression was significantly reduced when a consensus TATA sequence was deleted from the promoter region, indicating that the IEP efficiently inhibits its own promoter in a TATA box-dependent manner. Taken together, these results suggest that the EHV-1 IEP delicately modulates autoregulation of its gene through the consensus IEBS that is near the transcription initiation site and the TATA box.</description><identifier>ISSN: 0168-1702</identifier><identifier>EISSN: 1872-7492</identifier><identifier>DOI: 10.1016/j.virusres.2012.01.005</identifier><identifier>PMID: 22265772</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Binding Sites ; Cell Line ; Down-Regulation ; Equine herpesvirus 1 ; Gene Expression Regulation, Viral ; Herpesvirus 1, Equid - chemistry ; Herpesvirus 1, Equid - genetics ; Herpesvirus 1, Equid - metabolism ; Homeostasis ; Horse Diseases - virology ; Horses ; IE gene autorepression ; IEP-binding site ; Immediate-early protein ; Immediate-Early Proteins - chemistry ; Immediate-Early Proteins - genetics ; Immediate-Early Proteins - metabolism ; Protein Binding ; Regulatory Sequences, Nucleic Acid ; TATA box-dependent manner</subject><ispartof>Virus research, 2012-04, Vol.165 (1), p.52-60</ispartof><rights>2012</rights><rights>Copyright © 2012. Published by Elsevier B.V.</rights><rights>2012 Elsevier B.V. All rights reserved. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c470t-f479fe0160065cbc3078cbf9061d2d7da999b19c5fa15684f87c7813513849903</citedby><cites>FETCH-LOGICAL-c470t-f479fe0160065cbc3078cbf9061d2d7da999b19c5fa15684f87c7813513849903</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.virusres.2012.01.005$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,780,784,885,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22265772$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Seongman</creatorcontrib><creatorcontrib>Dai, Gan</creatorcontrib><creatorcontrib>O’Callaghan, Dennis J.</creatorcontrib><creatorcontrib>Kim, Seong Kee</creatorcontrib><title>Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene</title><title>Virus research</title><addtitle>Virus Res</addtitle><description>► We investigated the mechanism by which the EHV-1 IEP inhibits its own promoter. ► The IEP represses transcription from its gene through the consensus IEP-binding site (IEBS). ► The short distance between the TATA box and the IEBS is important for IEP-mediated repression. ► The IEP efficiently modulates autorepression of its gene in a TATA box-dependent manner.
The immediate-early protein (IEP), the major regulatory protein encoded by the IE gene of equine herpesvirus 1 (EHV-1), plays a crucial role as both transcription activator and repressor during a productive lytic infection. To investigate the mechanism by which the EHV-1 IEP inhibits its own promoter, IE promoter-luciferase reporter plasmids containing wild-type and mutant IEP-binding site (IEBS) were constructed and used for luciferase reporter assays. The IEP inhibited transcription from its own promoter in the presence of a consensus IEBS (5′-ATCGT-3′) located near the transcription initiation site but did not inhibit when the consensus sequence was deleted. To determine whether the distance between the TATA box and the IEBS affects transcriptional repression, the IEBS was displaced from the original site by the insertion of synthetic DNA sequences. Luciferase reporter assays revealed that the IEP is able to repress its own promoter when the IEBS is located within 26-bp from the TATA box. We also found that the proper orientation and position of the IEBS were required for the repression by the IEP. Interestingly, the level of repression was significantly reduced when a consensus TATA sequence was deleted from the promoter region, indicating that the IEP efficiently inhibits its own promoter in a TATA box-dependent manner. Taken together, these results suggest that the EHV-1 IEP delicately modulates autoregulation of its gene through the consensus IEBS that is near the transcription initiation site and the TATA box.</description><subject>Animals</subject><subject>Binding Sites</subject><subject>Cell Line</subject><subject>Down-Regulation</subject><subject>Equine herpesvirus 1</subject><subject>Gene Expression Regulation, Viral</subject><subject>Herpesvirus 1, Equid - chemistry</subject><subject>Herpesvirus 1, Equid - genetics</subject><subject>Herpesvirus 1, Equid - metabolism</subject><subject>Homeostasis</subject><subject>Horse Diseases - virology</subject><subject>Horses</subject><subject>IE gene autorepression</subject><subject>IEP-binding site</subject><subject>Immediate-early protein</subject><subject>Immediate-Early Proteins - chemistry</subject><subject>Immediate-Early Proteins - genetics</subject><subject>Immediate-Early Proteins - metabolism</subject><subject>Protein Binding</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>TATA box-dependent manner</subject><issn>0168-1702</issn><issn>1872-7492</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU9v2yAchlG1qsnafoWI2072AGMDl6pT1G6VIvXSnhHBPxIixyRgR1o_fcmSVttpJyR4_4kHoRklJSW0-b4pDz6OKUIqGaGsJLQkpL5AUyoFKwRX7AuaZqEsqCBsgr6mtCGENJVortCEMdbUQrApWs3XJho7QPRvZvChx8Fh61OR73y_wtDBFvoh4Qj70UdosQsRm3EIEXa5PZ0twxrwUdEDXkPcQfozD1P89IBX0MMNunSmS3B7Pq_R6-PDy_xXsXj--TT_sSgsF2QoHBfKQd6dp9Z2aSsipF06RRrasla0Rim1pMrWztC6kdxJYYWkVU0ryZUi1TW6O-XuxuUWWpu3R9PpXfRbE3_rYLz-96X3a70KB11VUirOc8C3c0AM-xHSoLc-Weg600MYk1Z1xSjnTGRlc1LaGFIm4T5bKNFHSHqjPyDpIyRNqM6QsnH298ZP2weVLLg_CSD_1MFD1Ml66C20mYAddBv8_zreAVm8qT4</recordid><startdate>20120401</startdate><enddate>20120401</enddate><creator>Kim, Seongman</creator><creator>Dai, Gan</creator><creator>O’Callaghan, Dennis J.</creator><creator>Kim, Seong Kee</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20120401</creationdate><title>Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene</title><author>Kim, Seongman ; Dai, Gan ; O’Callaghan, Dennis J. ; Kim, Seong Kee</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c470t-f479fe0160065cbc3078cbf9061d2d7da999b19c5fa15684f87c7813513849903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Binding Sites</topic><topic>Cell Line</topic><topic>Down-Regulation</topic><topic>Equine herpesvirus 1</topic><topic>Gene Expression Regulation, Viral</topic><topic>Herpesvirus 1, Equid - chemistry</topic><topic>Herpesvirus 1, Equid - genetics</topic><topic>Herpesvirus 1, Equid - metabolism</topic><topic>Homeostasis</topic><topic>Horse Diseases - virology</topic><topic>Horses</topic><topic>IE gene autorepression</topic><topic>IEP-binding site</topic><topic>Immediate-early protein</topic><topic>Immediate-Early Proteins - chemistry</topic><topic>Immediate-Early Proteins - genetics</topic><topic>Immediate-Early Proteins - metabolism</topic><topic>Protein Binding</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>TATA box-dependent manner</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Seongman</creatorcontrib><creatorcontrib>Dai, Gan</creatorcontrib><creatorcontrib>O’Callaghan, Dennis J.</creatorcontrib><creatorcontrib>Kim, Seong Kee</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Virus research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Seongman</au><au>Dai, Gan</au><au>O’Callaghan, Dennis J.</au><au>Kim, Seong Kee</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene</atitle><jtitle>Virus research</jtitle><addtitle>Virus Res</addtitle><date>2012-04-01</date><risdate>2012</risdate><volume>165</volume><issue>1</issue><spage>52</spage><epage>60</epage><pages>52-60</pages><issn>0168-1702</issn><eissn>1872-7492</eissn><abstract>► We investigated the mechanism by which the EHV-1 IEP inhibits its own promoter. ► The IEP represses transcription from its gene through the consensus IEP-binding site (IEBS). ► The short distance between the TATA box and the IEBS is important for IEP-mediated repression. ► The IEP efficiently modulates autorepression of its gene in a TATA box-dependent manner.
The immediate-early protein (IEP), the major regulatory protein encoded by the IE gene of equine herpesvirus 1 (EHV-1), plays a crucial role as both transcription activator and repressor during a productive lytic infection. To investigate the mechanism by which the EHV-1 IEP inhibits its own promoter, IE promoter-luciferase reporter plasmids containing wild-type and mutant IEP-binding site (IEBS) were constructed and used for luciferase reporter assays. The IEP inhibited transcription from its own promoter in the presence of a consensus IEBS (5′-ATCGT-3′) located near the transcription initiation site but did not inhibit when the consensus sequence was deleted. To determine whether the distance between the TATA box and the IEBS affects transcriptional repression, the IEBS was displaced from the original site by the insertion of synthetic DNA sequences. Luciferase reporter assays revealed that the IEP is able to repress its own promoter when the IEBS is located within 26-bp from the TATA box. We also found that the proper orientation and position of the IEBS were required for the repression by the IEP. Interestingly, the level of repression was significantly reduced when a consensus TATA sequence was deleted from the promoter region, indicating that the IEP efficiently inhibits its own promoter in a TATA box-dependent manner. Taken together, these results suggest that the EHV-1 IEP delicately modulates autoregulation of its gene through the consensus IEBS that is near the transcription initiation site and the TATA box.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>22265772</pmid><doi>10.1016/j.virusres.2012.01.005</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Binding Sites Cell Line Down-Regulation Equine herpesvirus 1 Gene Expression Regulation, Viral Herpesvirus 1, Equid - chemistry Herpesvirus 1, Equid - genetics Herpesvirus 1, Equid - metabolism Homeostasis Horse Diseases - virology Horses IE gene autorepression IEP-binding site Immediate-early protein Immediate-Early Proteins - chemistry Immediate-Early Proteins - genetics Immediate-Early Proteins - metabolism Protein Binding Regulatory Sequences, Nucleic Acid TATA box-dependent manner |
title | Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene |
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