Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9(T)) and comparison to "Dehalococcoides" strains

Dehalogenimonas lykanthroporepellens is the type species of the genus Dehalogenimonas, which belongs to a deeply branching lineage within the phylum Chloroflexi. This strictly anaerobic, mesophilic, non spore-forming, Gram-negative staining bacterium was first isolated from chlorinated solvent conta...

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Veröffentlicht in:Standards in genomic sciences 2012-01, Vol.6 (2), p.251-264
Hauptverfasser: Siddaramappa, Shivakumara, Challacombe, Jean F, Delano, Susana F, Green, Lance D, Daligault, Hajnalka, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Shunsheng, Goodwin, Lynne, Han, James, Woyke, Tanja, Pitluck, Sam, Pennacchio, Len, Nolan, Matt, Land, Miriam, Chang, Yun-Juan, Kyrpides, Nikos C, Ovchinnikova, Galina, Hauser, Loren, Lapidus, Alla, Yan, Jun, Bowman, Kimberly S, da Costa, Milton S, Rainey, Fred A, Moe, William M
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Sprache:eng
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Zusammenfassung:Dehalogenimonas lykanthroporepellens is the type species of the genus Dehalogenimonas, which belongs to a deeply branching lineage within the phylum Chloroflexi. This strictly anaerobic, mesophilic, non spore-forming, Gram-negative staining bacterium was first isolated from chlorinated solvent contaminated groundwater at a Superfund site located near Baton Rouge, Louisiana, USA. D. lykanthroporepellens was of interest for genome sequencing for two reasons: (a) an unusual ability to couple growth with reductive dechlorination of environmentally important polychlorinated aliphatic alkanes and (b) a phylogenetic position that is distant from previously sequenced bacteria. The 1,686,510 bp circular chromosome of strain BL-DC-9(T) contains 1,720 predicted protein coding genes, 47 tRNA genes, a single large subunit rRNA (23S-5S) locus, and a single, orphan, small subunit rRNA (16S) locus.
ISSN:1944-3277
1944-3277
DOI:10.4056/sigs.2806097