Concomitant Lethal Mutagenesis of Human Immunodeficiency Virus Type 1
RNA virus population dynamics are complex, and sophisticated approaches are needed in many cases for therapeutic intervention. One such approach, termed lethal mutagenesis, is directed at targeting the virus population structure for extinction or error catastrophe. Previous studies have demonstrated...
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description | RNA virus population dynamics are complex, and sophisticated approaches are needed in many cases for therapeutic intervention. One such approach, termed lethal mutagenesis, is directed at targeting the virus population structure for extinction or error catastrophe. Previous studies have demonstrated the concept of this approach with human immunodeficiency virus type 1 (HIV-1) by use of chemical mutagens [i.e., 5-azacytidine (5-AZC)] as well as by host factors with mutagenic properties (i.e., APOBEC3G). In this study, these two unrelated mutagenic agents were used concomitantly to investigate the interplay of these distinct mutagenic mechanisms. Specifically, an HIV-1 was produced from APOBEC3G (A3G)-expressing cells and used to infect permissive target cells treated with 5-AZC. Reduced viral infectivity and increased viral mutagenesis were observed with both the viral mutagen (i.e., G-to-C mutations) and the host restriction factor (i.e., G-to-A mutations); however, when combined, they had complex interactions. Intriguingly, nucleotide sequence analysis revealed that concomitant HIV-1 exposure to both 5-AZC and A3G resulted in an increase in G-to-A viral mutagenesis at the expense of G-to-C mutagenesis. A3G catalytic activity was required for the diminution in G-to-C mutagenesis. Taken together, our findings provide the first demonstration for potentiation of the mutagenic effect of a cytosine analog by A3G expression, resulting in concomitant HIV-1 lethal mutagenesis.
▪
► Two mutagenic agents were used concomitantly to investigate their interplay. ► Concomitant exposure increased G-to-A mutation at the expense of G-to-C mutations. ► First demonstration of potentiation of a mutagenic cytosine analog by A3G. |
doi_str_mv | 10.1016/j.jmb.2012.03.003 |
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▪
► Two mutagenic agents were used concomitantly to investigate their interplay. ► Concomitant exposure increased G-to-A mutation at the expense of G-to-C mutations. ► First demonstration of potentiation of a mutagenic cytosine analog by A3G.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1016/j.jmb.2012.03.003</identifier><identifier>PMID: 22426127</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>APOBEC-3G Deaminase ; Azacitidine - pharmacology ; Azacytidine ; catalytic activity ; Cell Line ; Cytidine Deaminase - genetics ; Cytidine Deaminase - metabolism ; Cytosine ; deamination ; evolution ; Extinction ; HIV-1 - genetics ; HIV-1 - metabolism ; HIV-1 - physiology ; Human immunodeficiency virus 1 ; Humans ; Infectivity ; lentivirus ; Mutagenesis ; mutagenicity ; Mutagens ; Mutagens - pharmacology ; Mutation ; Nucleotide sequence ; nucleotide sequences ; pathogenicity ; Population dynamics ; Population structure ; Potentiation ; retrovirus ; RNA ; RNA viruses ; RNA, Viral - genetics ; sequence analysis ; Sequence Analysis, RNA ; Therapeutic applications ; transversion ; vif Gene Products, Human Immunodeficiency Virus - genetics ; Virus Replication - genetics ; viruses</subject><ispartof>Journal of molecular biology, 2012-06, Vol.419 (3-4), p.158-170</ispartof><rights>2012 Elsevier Ltd</rights><rights>Copyright © 2012 Elsevier Ltd. All rights reserved.</rights><rights>2012 Elsevier Ltd. All rights reserved. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-44648781c502fe9a3399bfbb64bd1c65285f479143ef19f3ed54d148c389a5f83</citedby><cites>FETCH-LOGICAL-c508t-44648781c502fe9a3399bfbb64bd1c65285f479143ef19f3ed54d148c389a5f83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.jmb.2012.03.003$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,780,784,885,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22426127$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dapp, Michael J.</creatorcontrib><creatorcontrib>Holtz, Colleen M.</creatorcontrib><creatorcontrib>Mansky, Louis M.</creatorcontrib><title>Concomitant Lethal Mutagenesis of Human Immunodeficiency Virus Type 1</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>RNA virus population dynamics are complex, and sophisticated approaches are needed in many cases for therapeutic intervention. One such approach, termed lethal mutagenesis, is directed at targeting the virus population structure for extinction or error catastrophe. Previous studies have demonstrated the concept of this approach with human immunodeficiency virus type 1 (HIV-1) by use of chemical mutagens [i.e., 5-azacytidine (5-AZC)] as well as by host factors with mutagenic properties (i.e., APOBEC3G). In this study, these two unrelated mutagenic agents were used concomitantly to investigate the interplay of these distinct mutagenic mechanisms. Specifically, an HIV-1 was produced from APOBEC3G (A3G)-expressing cells and used to infect permissive target cells treated with 5-AZC. Reduced viral infectivity and increased viral mutagenesis were observed with both the viral mutagen (i.e., G-to-C mutations) and the host restriction factor (i.e., G-to-A mutations); however, when combined, they had complex interactions. Intriguingly, nucleotide sequence analysis revealed that concomitant HIV-1 exposure to both 5-AZC and A3G resulted in an increase in G-to-A viral mutagenesis at the expense of G-to-C mutagenesis. A3G catalytic activity was required for the diminution in G-to-C mutagenesis. Taken together, our findings provide the first demonstration for potentiation of the mutagenic effect of a cytosine analog by A3G expression, resulting in concomitant HIV-1 lethal mutagenesis.
▪
► Two mutagenic agents were used concomitantly to investigate their interplay. ► Concomitant exposure increased G-to-A mutation at the expense of G-to-C mutations. ► First demonstration of potentiation of a mutagenic cytosine analog by A3G.</description><subject>APOBEC-3G Deaminase</subject><subject>Azacitidine - pharmacology</subject><subject>Azacytidine</subject><subject>catalytic activity</subject><subject>Cell Line</subject><subject>Cytidine Deaminase - genetics</subject><subject>Cytidine Deaminase - metabolism</subject><subject>Cytosine</subject><subject>deamination</subject><subject>evolution</subject><subject>Extinction</subject><subject>HIV-1 - genetics</subject><subject>HIV-1 - metabolism</subject><subject>HIV-1 - physiology</subject><subject>Human immunodeficiency virus 1</subject><subject>Humans</subject><subject>Infectivity</subject><subject>lentivirus</subject><subject>Mutagenesis</subject><subject>mutagenicity</subject><subject>Mutagens</subject><subject>Mutagens - pharmacology</subject><subject>Mutation</subject><subject>Nucleotide sequence</subject><subject>nucleotide sequences</subject><subject>pathogenicity</subject><subject>Population dynamics</subject><subject>Population structure</subject><subject>Potentiation</subject><subject>retrovirus</subject><subject>RNA</subject><subject>RNA viruses</subject><subject>RNA, Viral - genetics</subject><subject>sequence analysis</subject><subject>Sequence Analysis, RNA</subject><subject>Therapeutic applications</subject><subject>transversion</subject><subject>vif Gene Products, Human Immunodeficiency Virus - genetics</subject><subject>Virus Replication - genetics</subject><subject>viruses</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU1v1DAQhi1ERbeFH8AFcuSS1J9ZW0hIaFXaSos40HK1HGe89SqxFzuptP8eL9tW5cLJGvmZd8aPEXpPcEMwaS-2zXbsGooJbTBrMGav0IJgqWrZMvkaLTCmtKaStafoLOctxlgwLt-gU0o5bQldLtDlKgYbRz-ZMFVrmO7NUH2fJ7OBANnnKrrqeh5NqG7GcQ6xB-eth2D31S-f5lzd7ndQkbfoxJkhw7vH8xzdfbu8XV3X6x9XN6uv69oKLKea85bLpSSlog6UYUypznVdy7ue2FZQKRxfKsIZOKIcg17wnnBpmVRGOMnO0Zdj7m7uRugthCmZQe-SH03a62i8_vcm-Hu9iQ-alXez5SHg02NAir9nyJMefbYwDCZAnLMmmEmhhGC0oOSI2hRzTuCexxCsD_r1Vhf9-qBfY6aL_tLz4eV-zx1Pvgvw8Qg4E7XZJJ_13c-SIMrfcCEULsTnIwHF44OHpPNf4dD7BHbSffT_WeAPsaueuw</recordid><startdate>20120608</startdate><enddate>20120608</enddate><creator>Dapp, Michael J.</creator><creator>Holtz, Colleen M.</creator><creator>Mansky, Louis M.</creator><general>Elsevier Ltd</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>7U9</scope><scope>H94</scope><scope>5PM</scope></search><sort><creationdate>20120608</creationdate><title>Concomitant Lethal Mutagenesis of Human Immunodeficiency Virus Type 1</title><author>Dapp, Michael J. ; Holtz, Colleen M. ; Mansky, Louis M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c508t-44648781c502fe9a3399bfbb64bd1c65285f479143ef19f3ed54d148c389a5f83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>APOBEC-3G Deaminase</topic><topic>Azacitidine - pharmacology</topic><topic>Azacytidine</topic><topic>catalytic activity</topic><topic>Cell Line</topic><topic>Cytidine Deaminase - genetics</topic><topic>Cytidine Deaminase - metabolism</topic><topic>Cytosine</topic><topic>deamination</topic><topic>evolution</topic><topic>Extinction</topic><topic>HIV-1 - genetics</topic><topic>HIV-1 - metabolism</topic><topic>HIV-1 - physiology</topic><topic>Human immunodeficiency virus 1</topic><topic>Humans</topic><topic>Infectivity</topic><topic>lentivirus</topic><topic>Mutagenesis</topic><topic>mutagenicity</topic><topic>Mutagens</topic><topic>Mutagens - pharmacology</topic><topic>Mutation</topic><topic>Nucleotide sequence</topic><topic>nucleotide sequences</topic><topic>pathogenicity</topic><topic>Population dynamics</topic><topic>Population structure</topic><topic>Potentiation</topic><topic>retrovirus</topic><topic>RNA</topic><topic>RNA viruses</topic><topic>RNA, Viral - genetics</topic><topic>sequence analysis</topic><topic>Sequence Analysis, RNA</topic><topic>Therapeutic applications</topic><topic>transversion</topic><topic>vif Gene Products, Human Immunodeficiency Virus - genetics</topic><topic>Virus Replication - genetics</topic><topic>viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dapp, Michael J.</creatorcontrib><creatorcontrib>Holtz, Colleen M.</creatorcontrib><creatorcontrib>Mansky, Louis M.</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dapp, Michael J.</au><au>Holtz, Colleen M.</au><au>Mansky, Louis M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Concomitant Lethal Mutagenesis of Human Immunodeficiency Virus Type 1</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>2012-06-08</date><risdate>2012</risdate><volume>419</volume><issue>3-4</issue><spage>158</spage><epage>170</epage><pages>158-170</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>RNA virus population dynamics are complex, and sophisticated approaches are needed in many cases for therapeutic intervention. One such approach, termed lethal mutagenesis, is directed at targeting the virus population structure for extinction or error catastrophe. Previous studies have demonstrated the concept of this approach with human immunodeficiency virus type 1 (HIV-1) by use of chemical mutagens [i.e., 5-azacytidine (5-AZC)] as well as by host factors with mutagenic properties (i.e., APOBEC3G). In this study, these two unrelated mutagenic agents were used concomitantly to investigate the interplay of these distinct mutagenic mechanisms. Specifically, an HIV-1 was produced from APOBEC3G (A3G)-expressing cells and used to infect permissive target cells treated with 5-AZC. Reduced viral infectivity and increased viral mutagenesis were observed with both the viral mutagen (i.e., G-to-C mutations) and the host restriction factor (i.e., G-to-A mutations); however, when combined, they had complex interactions. Intriguingly, nucleotide sequence analysis revealed that concomitant HIV-1 exposure to both 5-AZC and A3G resulted in an increase in G-to-A viral mutagenesis at the expense of G-to-C mutagenesis. A3G catalytic activity was required for the diminution in G-to-C mutagenesis. Taken together, our findings provide the first demonstration for potentiation of the mutagenic effect of a cytosine analog by A3G expression, resulting in concomitant HIV-1 lethal mutagenesis.
▪
► Two mutagenic agents were used concomitantly to investigate their interplay. ► Concomitant exposure increased G-to-A mutation at the expense of G-to-C mutations. ► First demonstration of potentiation of a mutagenic cytosine analog by A3G.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>22426127</pmid><doi>10.1016/j.jmb.2012.03.003</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | APOBEC-3G Deaminase Azacitidine - pharmacology Azacytidine catalytic activity Cell Line Cytidine Deaminase - genetics Cytidine Deaminase - metabolism Cytosine deamination evolution Extinction HIV-1 - genetics HIV-1 - metabolism HIV-1 - physiology Human immunodeficiency virus 1 Humans Infectivity lentivirus Mutagenesis mutagenicity Mutagens Mutagens - pharmacology Mutation Nucleotide sequence nucleotide sequences pathogenicity Population dynamics Population structure Potentiation retrovirus RNA RNA viruses RNA, Viral - genetics sequence analysis Sequence Analysis, RNA Therapeutic applications transversion vif Gene Products, Human Immunodeficiency Virus - genetics Virus Replication - genetics viruses |
title | Concomitant Lethal Mutagenesis of Human Immunodeficiency Virus Type 1 |
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