Structural features for α-galactomannan binding to galectin-1
Galectins have a highly conserved carbohydrate-binding domain to which a variety of galactose-containing saccharides, both β- and α-galactosides, can interact with varying degrees of affinity. Recently, we demonstrated that the relatively large α(1 → 6)-D-galacto-β(1 → 4)-D-mannan (Davanat) binds ga...
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Veröffentlicht in: | Glycobiology (Oxford) 2012-04, Vol.22 (4), p.543-551 |
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description | Galectins have a highly conserved carbohydrate-binding domain to which a variety of galactose-containing saccharides, both β- and α-galactosides, can interact with varying degrees of affinity. Recently, we demonstrated that the relatively large α(1 → 6)-D-galacto-β(1 → 4)-D-mannan (Davanat) binds galectin-1 (gal-1) primarily at an alternative carbohydrate-binding domain. Here, we used a series of α-galactomannans (GMs) that vary in their mannose-to-galactose ratios for insight into an optimal structural signature for GM binding to gal-1. Heteronuclear single-quantum coherence nuclear magnetic resonance spectroscopy with (15)N-labeled gal-1 and statistical modeling suggest that the optimal signature consists of α-D-galactopyranosyl doublets surrounded by regions of about four or more "naked" mannose residues. These relatively large and complex GMs all appear to interact with varying degrees at essentially the same binding surface on gal-1 that includes the Davanat alternative binding site and elements of the canonical β-galactoside-binding region. The use of two small, well-defined GMs [6(1)-α(1 → 6)-D-galactosyl-β-D-mannotriaose and 6(3),6(4)-di-α(1 → 6)-D-galactosyl-β-D-mannopentaose] helped characterize how GMs, in general, interact in part with the canonical site. Overall, our findings contribute to better understanding interactions of gal-1 with larger, complex polysaccharides and to the development of GM-based therapeutics for clinical use. |
doi_str_mv | 10.1093/glycob/cwr173 |
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Recently, we demonstrated that the relatively large α(1 → 6)-D-galacto-β(1 → 4)-D-mannan (Davanat) binds galectin-1 (gal-1) primarily at an alternative carbohydrate-binding domain. Here, we used a series of α-galactomannans (GMs) that vary in their mannose-to-galactose ratios for insight into an optimal structural signature for GM binding to gal-1. Heteronuclear single-quantum coherence nuclear magnetic resonance spectroscopy with (15)N-labeled gal-1 and statistical modeling suggest that the optimal signature consists of α-D-galactopyranosyl doublets surrounded by regions of about four or more "naked" mannose residues. These relatively large and complex GMs all appear to interact with varying degrees at essentially the same binding surface on gal-1 that includes the Davanat alternative binding site and elements of the canonical β-galactoside-binding region. The use of two small, well-defined GMs [6(1)-α(1 → 6)-D-galactosyl-β-D-mannotriaose and 6(3),6(4)-di-α(1 → 6)-D-galactosyl-β-D-mannopentaose] helped characterize how GMs, in general, interact in part with the canonical site. Overall, our findings contribute to better understanding interactions of gal-1 with larger, complex polysaccharides and to the development of GM-based therapeutics for clinical use.</description><identifier>ISSN: 0959-6658</identifier><identifier>EISSN: 1460-2423</identifier><identifier>DOI: 10.1093/glycob/cwr173</identifier><identifier>PMID: 22156919</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Amino Acid Motifs ; Binding Sites ; Carbohydrate Conformation ; Drug Design ; Galectin 1 - chemistry ; Humans ; Magnetic Resonance Spectroscopy ; Mannans - chemistry ; Models, Molecular ; Oligosaccharides - chemistry ; Original ; Protein Binding ; Protein Structure, Quaternary ; Protein Structure, Tertiary ; Trisaccharides - chemistry</subject><ispartof>Glycobiology (Oxford), 2012-04, Vol.22 (4), p.543-551</ispartof><rights>The Author 2011. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c386t-5d344bf49f96e640ca2d30f809cc8a7e203f65654d191db247ee8ca44b5b96b53</citedby><cites>FETCH-LOGICAL-c386t-5d344bf49f96e640ca2d30f809cc8a7e203f65654d191db247ee8ca44b5b96b53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22156919$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Miller, Michelle C</creatorcontrib><creatorcontrib>Klyosov, Anatole A</creatorcontrib><creatorcontrib>Mayo, Kevin H</creatorcontrib><title>Structural features for α-galactomannan binding to galectin-1</title><title>Glycobiology (Oxford)</title><addtitle>Glycobiology</addtitle><description>Galectins have a highly conserved carbohydrate-binding domain to which a variety of galactose-containing saccharides, both β- and α-galactosides, can interact with varying degrees of affinity. Recently, we demonstrated that the relatively large α(1 → 6)-D-galacto-β(1 → 4)-D-mannan (Davanat) binds galectin-1 (gal-1) primarily at an alternative carbohydrate-binding domain. Here, we used a series of α-galactomannans (GMs) that vary in their mannose-to-galactose ratios for insight into an optimal structural signature for GM binding to gal-1. Heteronuclear single-quantum coherence nuclear magnetic resonance spectroscopy with (15)N-labeled gal-1 and statistical modeling suggest that the optimal signature consists of α-D-galactopyranosyl doublets surrounded by regions of about four or more "naked" mannose residues. These relatively large and complex GMs all appear to interact with varying degrees at essentially the same binding surface on gal-1 that includes the Davanat alternative binding site and elements of the canonical β-galactoside-binding region. The use of two small, well-defined GMs [6(1)-α(1 → 6)-D-galactosyl-β-D-mannotriaose and 6(3),6(4)-di-α(1 → 6)-D-galactosyl-β-D-mannopentaose] helped characterize how GMs, in general, interact in part with the canonical site. Overall, our findings contribute to better understanding interactions of gal-1 with larger, complex polysaccharides and to the development of GM-based therapeutics for clinical use.</description><subject>Amino Acid Motifs</subject><subject>Binding Sites</subject><subject>Carbohydrate Conformation</subject><subject>Drug Design</subject><subject>Galectin 1 - chemistry</subject><subject>Humans</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>Mannans - chemistry</subject><subject>Models, Molecular</subject><subject>Oligosaccharides - chemistry</subject><subject>Original</subject><subject>Protein Binding</subject><subject>Protein Structure, Quaternary</subject><subject>Protein Structure, Tertiary</subject><subject>Trisaccharides - chemistry</subject><issn>0959-6658</issn><issn>1460-2423</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkE1OwzAQhS0EoqWwZItyAVP_J95UQhV_UiUWwNqyHTsEpXblpKAei4twJowCFaxmpHnvzcwHwDlGlxhJOm-6nY1mbt8TLukBmGImECSM0EMwRZJLKASvJuCk718RwgJX_BhMCMFcSCynYPE4pK0dtkl3hXc6N64vfEzF5wdsdKftENc6BB0K04a6DU0xxCIPnB3aAPEpOPK6693ZT52B55vrp-UdXD3c3i-vVtDSSgyQ15Qx45n0UjjBkNWkpshXSFpb6dIRRL3ggrMaS1wbwkrnKquzhxspDKczsBhzN1uzdrV1YcgXq01q1zrtVNSt-j8J7Ytq4puipCrz2zkAjgE2xb5Pzu-9GKlvkGoEqUaQWX_xd-Fe_UuOfgGihXNv</recordid><startdate>20120401</startdate><enddate>20120401</enddate><creator>Miller, Michelle C</creator><creator>Klyosov, Anatole A</creator><creator>Mayo, Kevin H</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope></search><sort><creationdate>20120401</creationdate><title>Structural features for α-galactomannan binding to galectin-1</title><author>Miller, Michelle C ; Klyosov, Anatole A ; Mayo, Kevin H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c386t-5d344bf49f96e640ca2d30f809cc8a7e203f65654d191db247ee8ca44b5b96b53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Amino Acid Motifs</topic><topic>Binding Sites</topic><topic>Carbohydrate Conformation</topic><topic>Drug Design</topic><topic>Galectin 1 - chemistry</topic><topic>Humans</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>Mannans - chemistry</topic><topic>Models, Molecular</topic><topic>Oligosaccharides - chemistry</topic><topic>Original</topic><topic>Protein Binding</topic><topic>Protein Structure, Quaternary</topic><topic>Protein Structure, Tertiary</topic><topic>Trisaccharides - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Miller, Michelle C</creatorcontrib><creatorcontrib>Klyosov, Anatole A</creatorcontrib><creatorcontrib>Mayo, Kevin H</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Glycobiology (Oxford)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Miller, Michelle C</au><au>Klyosov, Anatole A</au><au>Mayo, Kevin H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural features for α-galactomannan binding to galectin-1</atitle><jtitle>Glycobiology (Oxford)</jtitle><addtitle>Glycobiology</addtitle><date>2012-04-01</date><risdate>2012</risdate><volume>22</volume><issue>4</issue><spage>543</spage><epage>551</epage><pages>543-551</pages><issn>0959-6658</issn><eissn>1460-2423</eissn><abstract>Galectins have a highly conserved carbohydrate-binding domain to which a variety of galactose-containing saccharides, both β- and α-galactosides, can interact with varying degrees of affinity. Recently, we demonstrated that the relatively large α(1 → 6)-D-galacto-β(1 → 4)-D-mannan (Davanat) binds galectin-1 (gal-1) primarily at an alternative carbohydrate-binding domain. Here, we used a series of α-galactomannans (GMs) that vary in their mannose-to-galactose ratios for insight into an optimal structural signature for GM binding to gal-1. Heteronuclear single-quantum coherence nuclear magnetic resonance spectroscopy with (15)N-labeled gal-1 and statistical modeling suggest that the optimal signature consists of α-D-galactopyranosyl doublets surrounded by regions of about four or more "naked" mannose residues. These relatively large and complex GMs all appear to interact with varying degrees at essentially the same binding surface on gal-1 that includes the Davanat alternative binding site and elements of the canonical β-galactoside-binding region. The use of two small, well-defined GMs [6(1)-α(1 → 6)-D-galactosyl-β-D-mannotriaose and 6(3),6(4)-di-α(1 → 6)-D-galactosyl-β-D-mannopentaose] helped characterize how GMs, in general, interact in part with the canonical site. Overall, our findings contribute to better understanding interactions of gal-1 with larger, complex polysaccharides and to the development of GM-based therapeutics for clinical use.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>22156919</pmid><doi>10.1093/glycob/cwr173</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Oxford University Press Journals All Titles (1996-Current); Alma/SFX Local Collection |
subjects | Amino Acid Motifs Binding Sites Carbohydrate Conformation Drug Design Galectin 1 - chemistry Humans Magnetic Resonance Spectroscopy Mannans - chemistry Models, Molecular Oligosaccharides - chemistry Original Protein Binding Protein Structure, Quaternary Protein Structure, Tertiary Trisaccharides - chemistry |
title | Structural features for α-galactomannan binding to galectin-1 |
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