A structural study of Hypocrea jecorina Cel5A
Interest in generating lignocellulosic biofuels through enzymatic hydrolysis continues to rise as nonrenewable fossil fuels are depleted. The high cost of producing cellulases, hydrolytic enzymes that cleave cellulose into fermentable sugars, currently hinders economically viable biofuel production....
Gespeichert in:
Veröffentlicht in: | Protein science 2011-11, Vol.20 (11), p.1935-1940 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 1940 |
---|---|
container_issue | 11 |
container_start_page | 1935 |
container_title | Protein science |
container_volume | 20 |
creator | Lee, Toni M. Farrow, Mary F. Arnold, Frances H. Mayo, Stephen L. |
description | Interest in generating lignocellulosic biofuels through enzymatic hydrolysis continues to rise as nonrenewable fossil fuels are depleted. The high cost of producing cellulases, hydrolytic enzymes that cleave cellulose into fermentable sugars, currently hinders economically viable biofuel production. Here, we report the crystal structure of a prevalent endoglucanase in the biofuels industry, Cel5A from the filamentous fungus Hypocrea jecorina. The structure reveals a general fold resembling that of the closest homolog with a high‐resolution structure, Cel5A from Thermoascus aurantiacus. Consistent with previously described endoglucanase structures, the H. jecorina Cel5A active site contains a primarily hydrophobic substrate binding groove and a series of hydrogen bond networks surrounding two catalytic glutamates. The reported structure, however, demonstrates stark differences between side‐chain identity, loop regions, and the number of disulfides. Such structural information may aid efforts to improve the stability of this protein for industrial use while maintaining enzymatic activity through revealing nonessential and immutable regions.
PDB Code(s): 3QR3 |
doi_str_mv | 10.1002/pro.730 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3267957</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>900624464</sourcerecordid><originalsourceid>FETCH-LOGICAL-c5310-3a9af173b58ed7b12d18067b490e734a75970edacd2539601a63ceabffd19ee33</originalsourceid><addsrcrecordid>eNp9kVtr3DAQRkVJaDZp6T8Ihjw0EJyOLtblJbAsuUEgpbTQNyHL48SL19pI64b999GSawPtkyTmcDQzHyFfKBxTAPZtGcOx4vCBTKiQptRG_t4iEzCSlppLvUN2U5oDgKCMfyQ7jGqjZcUmpJwWaRVHvxqj6_N1bNZFaIuL9TL4iK6Yow-xG1wxw76afiLbresTfn4698ivs9Ofs4vy6vr8cja9Kn3FKZTcGddSxetKY6NqyhqqQapaGEDFhVOVUYCN8w2ruJFAneQeXd22DTWInO-Rk0fvcqwX2HgcVrk9u4zdwsW1Da6zf1eG7tbehD-WM6lMpbLg65MghrsR08ouuuSx792AYUzWAEgmhBSZPPwvSZWGChSTJqMH79B5GOOQF5EpKbWgUpjXr30MKUVsX9qmYDdh5XewOaxM7r-d8oV7TicDR4_Afdfj-l8e-_3H9Ub3AOeznAU</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1766841649</pqid></control><display><type>article</type><title>A structural study of Hypocrea jecorina Cel5A</title><source>MEDLINE</source><source>Wiley Journals</source><source>Wiley Online Library Free Content</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Lee, Toni M. ; Farrow, Mary F. ; Arnold, Frances H. ; Mayo, Stephen L.</creator><creatorcontrib>Lee, Toni M. ; Farrow, Mary F. ; Arnold, Frances H. ; Mayo, Stephen L.</creatorcontrib><description>Interest in generating lignocellulosic biofuels through enzymatic hydrolysis continues to rise as nonrenewable fossil fuels are depleted. The high cost of producing cellulases, hydrolytic enzymes that cleave cellulose into fermentable sugars, currently hinders economically viable biofuel production. Here, we report the crystal structure of a prevalent endoglucanase in the biofuels industry, Cel5A from the filamentous fungus Hypocrea jecorina. The structure reveals a general fold resembling that of the closest homolog with a high‐resolution structure, Cel5A from Thermoascus aurantiacus. Consistent with previously described endoglucanase structures, the H. jecorina Cel5A active site contains a primarily hydrophobic substrate binding groove and a series of hydrogen bond networks surrounding two catalytic glutamates. The reported structure, however, demonstrates stark differences between side‐chain identity, loop regions, and the number of disulfides. Such structural information may aid efforts to improve the stability of this protein for industrial use while maintaining enzymatic activity through revealing nonessential and immutable regions.
PDB Code(s): 3QR3</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1002/pro.730</identifier><identifier>PMID: 21898652</identifier><identifier>CODEN: PRCIEI</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Amino Acid Sequence ; Biodiesel fuels ; biofuel ; Biofuels ; Catalytic Domain ; Cel5A ; cellulase ; Cellulase - chemistry ; cellulose ; Chemical Phenomena ; Crystal structure ; Crystallization ; Disulfides - chemistry ; endoglucanase ; Hydrogen Bonding ; Hypocrea - enzymology ; Hypocrea jecorina ; Models, Molecular ; Protein Binding ; Protein Conformation ; Protein Structure Report ; Sequence Homology, Amino Acid ; Thermoascus aurantiacus</subject><ispartof>Protein science, 2011-11, Vol.20 (11), p.1935-1940</ispartof><rights>Copyright © 2011 The Protein Society</rights><rights>Copyright © 2011 The Protein Society.</rights><rights>Copyright © 2011 The Protein Society 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5310-3a9af173b58ed7b12d18067b490e734a75970edacd2539601a63ceabffd19ee33</citedby><cites>FETCH-LOGICAL-c5310-3a9af173b58ed7b12d18067b490e734a75970edacd2539601a63ceabffd19ee33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267957/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267957/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,1417,1433,27924,27925,45574,45575,46409,46833,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21898652$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Toni M.</creatorcontrib><creatorcontrib>Farrow, Mary F.</creatorcontrib><creatorcontrib>Arnold, Frances H.</creatorcontrib><creatorcontrib>Mayo, Stephen L.</creatorcontrib><title>A structural study of Hypocrea jecorina Cel5A</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>Interest in generating lignocellulosic biofuels through enzymatic hydrolysis continues to rise as nonrenewable fossil fuels are depleted. The high cost of producing cellulases, hydrolytic enzymes that cleave cellulose into fermentable sugars, currently hinders economically viable biofuel production. Here, we report the crystal structure of a prevalent endoglucanase in the biofuels industry, Cel5A from the filamentous fungus Hypocrea jecorina. The structure reveals a general fold resembling that of the closest homolog with a high‐resolution structure, Cel5A from Thermoascus aurantiacus. Consistent with previously described endoglucanase structures, the H. jecorina Cel5A active site contains a primarily hydrophobic substrate binding groove and a series of hydrogen bond networks surrounding two catalytic glutamates. The reported structure, however, demonstrates stark differences between side‐chain identity, loop regions, and the number of disulfides. Such structural information may aid efforts to improve the stability of this protein for industrial use while maintaining enzymatic activity through revealing nonessential and immutable regions.
PDB Code(s): 3QR3</description><subject>Amino Acid Sequence</subject><subject>Biodiesel fuels</subject><subject>biofuel</subject><subject>Biofuels</subject><subject>Catalytic Domain</subject><subject>Cel5A</subject><subject>cellulase</subject><subject>Cellulase - chemistry</subject><subject>cellulose</subject><subject>Chemical Phenomena</subject><subject>Crystal structure</subject><subject>Crystallization</subject><subject>Disulfides - chemistry</subject><subject>endoglucanase</subject><subject>Hydrogen Bonding</subject><subject>Hypocrea - enzymology</subject><subject>Hypocrea jecorina</subject><subject>Models, Molecular</subject><subject>Protein Binding</subject><subject>Protein Conformation</subject><subject>Protein Structure Report</subject><subject>Sequence Homology, Amino Acid</subject><subject>Thermoascus aurantiacus</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kVtr3DAQRkVJaDZp6T8Ihjw0EJyOLtblJbAsuUEgpbTQNyHL48SL19pI64b999GSawPtkyTmcDQzHyFfKBxTAPZtGcOx4vCBTKiQptRG_t4iEzCSlppLvUN2U5oDgKCMfyQ7jGqjZcUmpJwWaRVHvxqj6_N1bNZFaIuL9TL4iK6Yow-xG1wxw76afiLbresTfn4698ivs9Ofs4vy6vr8cja9Kn3FKZTcGddSxetKY6NqyhqqQapaGEDFhVOVUYCN8w2ruJFAneQeXd22DTWInO-Rk0fvcqwX2HgcVrk9u4zdwsW1Da6zf1eG7tbehD-WM6lMpbLg65MghrsR08ouuuSx792AYUzWAEgmhBSZPPwvSZWGChSTJqMH79B5GOOQF5EpKbWgUpjXr30MKUVsX9qmYDdh5XewOaxM7r-d8oV7TicDR4_Afdfj-l8e-_3H9Ub3AOeznAU</recordid><startdate>201111</startdate><enddate>201111</enddate><creator>Lee, Toni M.</creator><creator>Farrow, Mary F.</creator><creator>Arnold, Frances H.</creator><creator>Mayo, Stephen L.</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T5</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201111</creationdate><title>A structural study of Hypocrea jecorina Cel5A</title><author>Lee, Toni M. ; Farrow, Mary F. ; Arnold, Frances H. ; Mayo, Stephen L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5310-3a9af173b58ed7b12d18067b490e734a75970edacd2539601a63ceabffd19ee33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Amino Acid Sequence</topic><topic>Biodiesel fuels</topic><topic>biofuel</topic><topic>Biofuels</topic><topic>Catalytic Domain</topic><topic>Cel5A</topic><topic>cellulase</topic><topic>Cellulase - chemistry</topic><topic>cellulose</topic><topic>Chemical Phenomena</topic><topic>Crystal structure</topic><topic>Crystallization</topic><topic>Disulfides - chemistry</topic><topic>endoglucanase</topic><topic>Hydrogen Bonding</topic><topic>Hypocrea - enzymology</topic><topic>Hypocrea jecorina</topic><topic>Models, Molecular</topic><topic>Protein Binding</topic><topic>Protein Conformation</topic><topic>Protein Structure Report</topic><topic>Sequence Homology, Amino Acid</topic><topic>Thermoascus aurantiacus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Toni M.</creatorcontrib><creatorcontrib>Farrow, Mary F.</creatorcontrib><creatorcontrib>Arnold, Frances H.</creatorcontrib><creatorcontrib>Mayo, Stephen L.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Toni M.</au><au>Farrow, Mary F.</au><au>Arnold, Frances H.</au><au>Mayo, Stephen L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A structural study of Hypocrea jecorina Cel5A</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2011-11</date><risdate>2011</risdate><volume>20</volume><issue>11</issue><spage>1935</spage><epage>1940</epage><pages>1935-1940</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><coden>PRCIEI</coden><abstract>Interest in generating lignocellulosic biofuels through enzymatic hydrolysis continues to rise as nonrenewable fossil fuels are depleted. The high cost of producing cellulases, hydrolytic enzymes that cleave cellulose into fermentable sugars, currently hinders economically viable biofuel production. Here, we report the crystal structure of a prevalent endoglucanase in the biofuels industry, Cel5A from the filamentous fungus Hypocrea jecorina. The structure reveals a general fold resembling that of the closest homolog with a high‐resolution structure, Cel5A from Thermoascus aurantiacus. Consistent with previously described endoglucanase structures, the H. jecorina Cel5A active site contains a primarily hydrophobic substrate binding groove and a series of hydrogen bond networks surrounding two catalytic glutamates. The reported structure, however, demonstrates stark differences between side‐chain identity, loop regions, and the number of disulfides. Such structural information may aid efforts to improve the stability of this protein for industrial use while maintaining enzymatic activity through revealing nonessential and immutable regions.
PDB Code(s): 3QR3</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>21898652</pmid><doi>10.1002/pro.730</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0961-8368 |
ispartof | Protein science, 2011-11, Vol.20 (11), p.1935-1940 |
issn | 0961-8368 1469-896X |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3267957 |
source | MEDLINE; Wiley Journals; Wiley Online Library Free Content; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Amino Acid Sequence Biodiesel fuels biofuel Biofuels Catalytic Domain Cel5A cellulase Cellulase - chemistry cellulose Chemical Phenomena Crystal structure Crystallization Disulfides - chemistry endoglucanase Hydrogen Bonding Hypocrea - enzymology Hypocrea jecorina Models, Molecular Protein Binding Protein Conformation Protein Structure Report Sequence Homology, Amino Acid Thermoascus aurantiacus |
title | A structural study of Hypocrea jecorina Cel5A |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-24T15%3A02%3A51IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=A%20structural%20study%20of%20Hypocrea%20jecorina%20Cel5A&rft.jtitle=Protein%20science&rft.au=Lee,%20Toni%20M.&rft.date=2011-11&rft.volume=20&rft.issue=11&rft.spage=1935&rft.epage=1940&rft.pages=1935-1940&rft.issn=0961-8368&rft.eissn=1469-896X&rft.coden=PRCIEI&rft_id=info:doi/10.1002/pro.730&rft_dat=%3Cproquest_pubme%3E900624464%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1766841649&rft_id=info:pmid/21898652&rfr_iscdi=true |