Two Zebrafish Alcohol Dehydrogenases Share Common Ancestry with Mammalian Class I, II, IV, and V Alcohol Dehydrogenase Genes but Have Distinct Functional Characteristics
Ethanol is teratogenic to many vertebrates. We are utilizing zebrafish as a model system to determine whether there is an association between ethanol metabolism and ethanol-mediated developmental toxicity. Here we report the isolation and characterization of two cDNAs encoding zebrafish alcohol dehy...
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Veröffentlicht in: | The Journal of biological chemistry 2004-09, Vol.279 (37), p.38303-38312 |
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description | Ethanol is teratogenic to many vertebrates. We are utilizing zebrafish as a model system to determine whether there is an association between ethanol metabolism and ethanol-mediated developmental toxicity. Here we report the isolation and characterization of two cDNAs encoding zebrafish alcohol dehydrogenases (ADHs). Phylogenetic analysis of these zebrafish ADHs indicates that they share a common ancestor with mammalian class I, II, IV, and V ADHs. The genes encoding these zebrafish ADHs have been named Adh8a and Adh8b by the nomenclature committee. Both genes were genetically mapped to chromosome 13. The 1450-bp Adh8a is 82, 73, 72, and 72% similar at the amino acid level to the Baltic cod ADH8 (previously named ADH1), the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. Also, the 1484-bp Adh8b is 77, 68, 67, and 66% similar at the amino acid level to the Baltic cod ADH8, the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. ADH8A and ADH8B share 86% amino acid similarity. To characterize the functional properties of ADH8A and ADH8B, recombinant proteins were purified from SF-9 insect cells. Kinetic studies demonstrate that ADH8A metabolizes ethanol, with a Vmax of 13.4 nmol/min/mg protein, whereas ADH8B does not metabolize ethanol. The ADH8A Km for ethanol as a substrate is 0.7 mm. 4-Methyl pyrazole, a classical competitive inhibitor of class I ADH, failed to inhibit ADH8A. ADH8B has the capacity to efficiently biotransform longer chain primary alcohols (≥5 carbons) and S-hydroxymethlyglutathione, whereas ADH8A does not efficiently metabolize these substrates. Finally, mRNA expression studies indicate that both ADH8A and ADH8B mRNA are expressed during early development and in the adult brain, fin, gill, heart, kidney, muscle, and liver. Together these results indicate that class I-like ADH is conserved in zebrafish, albeit with mixed functional properties. |
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We are utilizing zebrafish as a model system to determine whether there is an association between ethanol metabolism and ethanol-mediated developmental toxicity. Here we report the isolation and characterization of two cDNAs encoding zebrafish alcohol dehydrogenases (ADHs). Phylogenetic analysis of these zebrafish ADHs indicates that they share a common ancestor with mammalian class I, II, IV, and V ADHs. The genes encoding these zebrafish ADHs have been named Adh8a and Adh8b by the nomenclature committee. Both genes were genetically mapped to chromosome 13. The 1450-bp Adh8a is 82, 73, 72, and 72% similar at the amino acid level to the Baltic cod ADH8 (previously named ADH1), the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. Also, the 1484-bp Adh8b is 77, 68, 67, and 66% similar at the amino acid level to the Baltic cod ADH8, the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. ADH8A and ADH8B share 86% amino acid similarity. To characterize the functional properties of ADH8A and ADH8B, recombinant proteins were purified from SF-9 insect cells. Kinetic studies demonstrate that ADH8A metabolizes ethanol, with a Vmax of 13.4 nmol/min/mg protein, whereas ADH8B does not metabolize ethanol. The ADH8A Km for ethanol as a substrate is 0.7 mm. 4-Methyl pyrazole, a classical competitive inhibitor of class I ADH, failed to inhibit ADH8A. ADH8B has the capacity to efficiently biotransform longer chain primary alcohols (≥5 carbons) and S-hydroxymethlyglutathione, whereas ADH8A does not efficiently metabolize these substrates. Finally, mRNA expression studies indicate that both ADH8A and ADH8B mRNA are expressed during early development and in the adult brain, fin, gill, heart, kidney, muscle, and liver. Together these results indicate that class I-like ADH is conserved in zebrafish, albeit with mixed functional properties.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.M401165200</identifier><identifier>PMID: 15231826</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Alcohol Dehydrogenase - chemistry ; Alcohol Dehydrogenase - genetics ; Amino Acid Sequence ; Animals ; Binding, Competitive ; Cell Line ; Chromosome Mapping ; Conserved Sequence ; Danio rerio ; DNA, Complementary - metabolism ; Ethanol - pharmacology ; Freshwater ; Glutathione - analogs & derivatives ; Glutathione - chemistry ; Humans ; Insecta ; Kinetics ; Marine ; Mice ; Molecular Sequence Data ; Open Reading Frames ; Phylogeny ; Rats ; Recombinant Proteins - chemistry ; RNA, Messenger - metabolism ; Sequence Homology, Amino Acid ; Species Specificity ; Time Factors ; Tissue Distribution ; Zebrafish</subject><ispartof>The Journal of biological chemistry, 2004-09, Vol.279 (37), p.38303-38312</ispartof><rights>2004 © 2004 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>2004 by The American Society for Biochemistry and Molecular Biology, Inc. 2004</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c495t-563e6134918c1378ed8c09597ebe23919a57fdc39146d882a6b10112346b53de3</citedby><cites>FETCH-LOGICAL-c495t-563e6134918c1378ed8c09597ebe23919a57fdc39146d882a6b10112346b53de3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15231826$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Reimers, Mark J.</creatorcontrib><creatorcontrib>Hahn, Mark E.</creatorcontrib><creatorcontrib>Tanguay, Robert L.</creatorcontrib><title>Two Zebrafish Alcohol Dehydrogenases Share Common Ancestry with Mammalian Class I, II, IV, and V Alcohol Dehydrogenase Genes but Have Distinct Functional Characteristics</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>Ethanol is teratogenic to many vertebrates. We are utilizing zebrafish as a model system to determine whether there is an association between ethanol metabolism and ethanol-mediated developmental toxicity. Here we report the isolation and characterization of two cDNAs encoding zebrafish alcohol dehydrogenases (ADHs). Phylogenetic analysis of these zebrafish ADHs indicates that they share a common ancestor with mammalian class I, II, IV, and V ADHs. The genes encoding these zebrafish ADHs have been named Adh8a and Adh8b by the nomenclature committee. Both genes were genetically mapped to chromosome 13. The 1450-bp Adh8a is 82, 73, 72, and 72% similar at the amino acid level to the Baltic cod ADH8 (previously named ADH1), the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. Also, the 1484-bp Adh8b is 77, 68, 67, and 66% similar at the amino acid level to the Baltic cod ADH8, the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. ADH8A and ADH8B share 86% amino acid similarity. To characterize the functional properties of ADH8A and ADH8B, recombinant proteins were purified from SF-9 insect cells. Kinetic studies demonstrate that ADH8A metabolizes ethanol, with a Vmax of 13.4 nmol/min/mg protein, whereas ADH8B does not metabolize ethanol. The ADH8A Km for ethanol as a substrate is 0.7 mm. 4-Methyl pyrazole, a classical competitive inhibitor of class I ADH, failed to inhibit ADH8A. ADH8B has the capacity to efficiently biotransform longer chain primary alcohols (≥5 carbons) and S-hydroxymethlyglutathione, whereas ADH8A does not efficiently metabolize these substrates. Finally, mRNA expression studies indicate that both ADH8A and ADH8B mRNA are expressed during early development and in the adult brain, fin, gill, heart, kidney, muscle, and liver. Together these results indicate that class I-like ADH is conserved in zebrafish, albeit with mixed functional properties.</description><subject>Alcohol Dehydrogenase - chemistry</subject><subject>Alcohol Dehydrogenase - genetics</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Binding, Competitive</subject><subject>Cell Line</subject><subject>Chromosome Mapping</subject><subject>Conserved Sequence</subject><subject>Danio rerio</subject><subject>DNA, Complementary - metabolism</subject><subject>Ethanol - pharmacology</subject><subject>Freshwater</subject><subject>Glutathione - analogs & derivatives</subject><subject>Glutathione - chemistry</subject><subject>Humans</subject><subject>Insecta</subject><subject>Kinetics</subject><subject>Marine</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Open Reading Frames</subject><subject>Phylogeny</subject><subject>Rats</subject><subject>Recombinant Proteins - chemistry</subject><subject>RNA, Messenger - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Species Specificity</subject><subject>Time Factors</subject><subject>Tissue Distribution</subject><subject>Zebrafish</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kU1v1DAQhi0EokvhyhH5gDg1iz_ixLkgrVLartSKA6VCXCzHmd24SuzWTna1P4l_iVe7oiCBJX9I88w743kRekvJnJIy_3jfmPlNTigtBCPkGZpRInnGBf3-HM0IYTSrmJAn6FWM9yStvKIv0QkVjFPJihn6ebv1-Ac0Qa9s7PCiN77zPT6HbtcGvwanI0T8tdMBcO2HwTu8cAbiGHZ4a8cO3-hh0L3VDte9jhEvz_Byv-_OsHYtvvu3JL4El3SbacRXegP43MbROjPiiymd1jvd4zoV1WaEsI-Z-Bq9WOk-wpvjfYq-XXy-ra-y6y-Xy3pxnZm8EmMmCg4F5emf0lBeSmilIZWoSmiA8YpWWpSr1qRXXrRSMl00NI2P8bxoBG-Bn6JPB92HqRmgNeDGoHv1EOygw055bdXfEWc7tfYbxVlBy5IlgQ9HgeAfpzQqNdhooO-1Az9FRauckJKJBM4PoAk-xgCr30UoUXt3VXJXPbmbEt792doTfrQzAe8PQGfX3dYGUI31poNBsbJSvFRccsITJg8YpDluLAQVjYVka5tSzKhab__Xwi8eIsC5</recordid><startdate>20040910</startdate><enddate>20040910</enddate><creator>Reimers, Mark J.</creator><creator>Hahn, Mark E.</creator><creator>Tanguay, Robert L.</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20040910</creationdate><title>Two Zebrafish Alcohol Dehydrogenases Share Common Ancestry with Mammalian Class I, II, IV, and V Alcohol Dehydrogenase Genes but Have Distinct Functional Characteristics</title><author>Reimers, Mark J. ; Hahn, Mark E. ; Tanguay, Robert L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c495t-563e6134918c1378ed8c09597ebe23919a57fdc39146d882a6b10112346b53de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Alcohol Dehydrogenase - chemistry</topic><topic>Alcohol Dehydrogenase - genetics</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Binding, Competitive</topic><topic>Cell Line</topic><topic>Chromosome Mapping</topic><topic>Conserved Sequence</topic><topic>Danio rerio</topic><topic>DNA, Complementary - metabolism</topic><topic>Ethanol - pharmacology</topic><topic>Freshwater</topic><topic>Glutathione - analogs & derivatives</topic><topic>Glutathione - chemistry</topic><topic>Humans</topic><topic>Insecta</topic><topic>Kinetics</topic><topic>Marine</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Open Reading Frames</topic><topic>Phylogeny</topic><topic>Rats</topic><topic>Recombinant Proteins - chemistry</topic><topic>RNA, Messenger - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Species Specificity</topic><topic>Time Factors</topic><topic>Tissue Distribution</topic><topic>Zebrafish</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Reimers, Mark J.</creatorcontrib><creatorcontrib>Hahn, Mark E.</creatorcontrib><creatorcontrib>Tanguay, Robert L.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reimers, Mark J.</au><au>Hahn, Mark E.</au><au>Tanguay, Robert L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Two Zebrafish Alcohol Dehydrogenases Share Common Ancestry with Mammalian Class I, II, IV, and V Alcohol Dehydrogenase Genes but Have Distinct Functional Characteristics</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2004-09-10</date><risdate>2004</risdate><volume>279</volume><issue>37</issue><spage>38303</spage><epage>38312</epage><pages>38303-38312</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><abstract>Ethanol is teratogenic to many vertebrates. We are utilizing zebrafish as a model system to determine whether there is an association between ethanol metabolism and ethanol-mediated developmental toxicity. Here we report the isolation and characterization of two cDNAs encoding zebrafish alcohol dehydrogenases (ADHs). Phylogenetic analysis of these zebrafish ADHs indicates that they share a common ancestor with mammalian class I, II, IV, and V ADHs. The genes encoding these zebrafish ADHs have been named Adh8a and Adh8b by the nomenclature committee. Both genes were genetically mapped to chromosome 13. The 1450-bp Adh8a is 82, 73, 72, and 72% similar at the amino acid level to the Baltic cod ADH8 (previously named ADH1), the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. Also, the 1484-bp Adh8b is 77, 68, 67, and 66% similar at the amino acid level to the Baltic cod ADH8, the human ADH1B2, the mouse ADH1, and the rat ADH1, respectively. ADH8A and ADH8B share 86% amino acid similarity. To characterize the functional properties of ADH8A and ADH8B, recombinant proteins were purified from SF-9 insect cells. Kinetic studies demonstrate that ADH8A metabolizes ethanol, with a Vmax of 13.4 nmol/min/mg protein, whereas ADH8B does not metabolize ethanol. The ADH8A Km for ethanol as a substrate is 0.7 mm. 4-Methyl pyrazole, a classical competitive inhibitor of class I ADH, failed to inhibit ADH8A. ADH8B has the capacity to efficiently biotransform longer chain primary alcohols (≥5 carbons) and S-hydroxymethlyglutathione, whereas ADH8A does not efficiently metabolize these substrates. Finally, mRNA expression studies indicate that both ADH8A and ADH8B mRNA are expressed during early development and in the adult brain, fin, gill, heart, kidney, muscle, and liver. Together these results indicate that class I-like ADH is conserved in zebrafish, albeit with mixed functional properties.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>15231826</pmid><doi>10.1074/jbc.M401165200</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alcohol Dehydrogenase - chemistry Alcohol Dehydrogenase - genetics Amino Acid Sequence Animals Binding, Competitive Cell Line Chromosome Mapping Conserved Sequence Danio rerio DNA, Complementary - metabolism Ethanol - pharmacology Freshwater Glutathione - analogs & derivatives Glutathione - chemistry Humans Insecta Kinetics Marine Mice Molecular Sequence Data Open Reading Frames Phylogeny Rats Recombinant Proteins - chemistry RNA, Messenger - metabolism Sequence Homology, Amino Acid Species Specificity Time Factors Tissue Distribution Zebrafish |
title | Two Zebrafish Alcohol Dehydrogenases Share Common Ancestry with Mammalian Class I, II, IV, and V Alcohol Dehydrogenase Genes but Have Distinct Functional Characteristics |
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