BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium

The cAMP response element-binding protein (CREB) is a highly conserved transcription factor that integrates signaling through the cAMP-dependent protein kinase A (PKA) in many eukaryotes. PKA plays a critical role in Dictyostelium development but no CREB homologue has been identified in this system....

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Veröffentlicht in:Developmental biology 2011-10, Vol.358 (1), p.137-146
Hauptverfasser: Huang, Eryong, Talukder, Shaheynoor, Hughes, Timothy R., Curk, Tomaz, Zupan, Blaz, Shaulsky, Gad, Katoh-Kurasawa, Mariko
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container_end_page 146
container_issue 1
container_start_page 137
container_title Developmental biology
container_volume 358
creator Huang, Eryong
Talukder, Shaheynoor
Hughes, Timothy R.
Curk, Tomaz
Zupan, Blaz
Shaulsky, Gad
Katoh-Kurasawa, Mariko
description The cAMP response element-binding protein (CREB) is a highly conserved transcription factor that integrates signaling through the cAMP-dependent protein kinase A (PKA) in many eukaryotes. PKA plays a critical role in Dictyostelium development but no CREB homologue has been identified in this system. Here we show that Dictyostelium utilizes a CREB-like protein, BzpF, to integrate PKA signaling during late development. bzpF− mutants produce compromised spores, which are extremely unstable and germination defective. Previously, we have found that BzpF binds the canonical CRE motif in vitro. In this paper, we determined the DNA binding specificity of BzpF using protein binding microarray (PBM) and showed that the motif with the highest specificity is a CRE-like sequence. BzpF is necessary to activate the transcription of at least 15 PKA-regulated, late-developmental target genes whose promoters contain BzpF binding motifs. BzpF is sufficient to activate two of these genes. The comparison of RNA sequencing data between wild type and bzpF− mutant revealed that the mutant fails to express 205 genes, many of which encode cellulose-binding and sugar-binding proteins. We propose that BzpF is a CREB-like transcription factor that regulates spore maturation and stability in a PKA-related manner. ► Dictyostelium bZIP protein BzpF binds to CRE-like sequence with high specificity. ► bzpF is expressed preferentially in spores during late culmination stage. ► Loss of BzpF results in severe defects in spore maturation and stability. ► We found 15 PKA-regulated, late-developmental genes as potential BzpF direct targets. ► Many under-expressed genes in bzpF− encode cellulose- and sugar-binding proteins.
doi_str_mv 10.1016/j.ydbio.2011.07.017
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We propose that BzpF is a CREB-like transcription factor that regulates spore maturation and stability in a PKA-related manner. ► Dictyostelium bZIP protein BzpF binds to CRE-like sequence with high specificity. ► bzpF is expressed preferentially in spores during late culmination stage. ► Loss of BzpF results in severe defects in spore maturation and stability. ► We found 15 PKA-regulated, late-developmental genes as potential BzpF direct targets. ► Many under-expressed genes in bzpF− encode cellulose- and sugar-binding proteins.</description><identifier>ISSN: 0012-1606</identifier><identifier>EISSN: 1095-564X</identifier><identifier>DOI: 10.1016/j.ydbio.2011.07.017</identifier><identifier>PMID: 21810415</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>cAMP-dependent protein kinase ; CREB-like bZIP transcription factor BzpF ; cyclic AMP ; Cyclic AMP response element-binding protein ; Cyclic AMP Response Element-Binding Protein - genetics ; Cyclic AMP Response Element-Binding Protein - metabolism ; Cyclic AMP-Dependent Protein Kinases - metabolism ; Data processing ; Development ; Dictyostelium ; Dictyostelium - physiology ; DNA ; DNA microarrays ; DNA Primers - genetics ; eukaryotic cells ; genes ; Germination ; Late-developmental target genes ; Microarray Analysis ; microarray technology ; mutants ; Nucleotide sequence ; PKA pathway ; Plasmids - genetics ; Promoters ; Protein arrays ; Protein Binding ; Protein kinase A ; proteins ; Reverse Transcriptase Polymerase Chain Reaction ; RNA ; Sequence Analysis, RNA ; Signal Transduction - physiology ; Spore maturation ; Spore stability ; Spores ; Spores, Protozoan - growth &amp; development ; Spores, Protozoan - metabolism ; Transcription factors</subject><ispartof>Developmental biology, 2011-10, Vol.358 (1), p.137-146</ispartof><rights>2011 Elsevier Inc.</rights><rights>Copyright © 2011 Elsevier Inc. 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development</topic><topic>Spores, Protozoan - metabolism</topic><topic>Transcription factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huang, Eryong</creatorcontrib><creatorcontrib>Talukder, Shaheynoor</creatorcontrib><creatorcontrib>Hughes, Timothy R.</creatorcontrib><creatorcontrib>Curk, Tomaz</creatorcontrib><creatorcontrib>Zupan, Blaz</creatorcontrib><creatorcontrib>Shaulsky, Gad</creatorcontrib><creatorcontrib>Katoh-Kurasawa, Mariko</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Developmental biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huang, Eryong</au><au>Talukder, Shaheynoor</au><au>Hughes, Timothy R.</au><au>Curk, Tomaz</au><au>Zupan, Blaz</au><au>Shaulsky, Gad</au><au>Katoh-Kurasawa, Mariko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium</atitle><jtitle>Developmental biology</jtitle><addtitle>Dev Biol</addtitle><date>2011-10-01</date><risdate>2011</risdate><volume>358</volume><issue>1</issue><spage>137</spage><epage>146</epage><pages>137-146</pages><issn>0012-1606</issn><eissn>1095-564X</eissn><abstract>The cAMP response element-binding protein (CREB) is a highly conserved transcription factor that integrates signaling through the cAMP-dependent protein kinase A (PKA) in many eukaryotes. PKA plays a critical role in Dictyostelium development but no CREB homologue has been identified in this system. Here we show that Dictyostelium utilizes a CREB-like protein, BzpF, to integrate PKA signaling during late development. bzpF− mutants produce compromised spores, which are extremely unstable and germination defective. Previously, we have found that BzpF binds the canonical CRE motif in vitro. In this paper, we determined the DNA binding specificity of BzpF using protein binding microarray (PBM) and showed that the motif with the highest specificity is a CRE-like sequence. BzpF is necessary to activate the transcription of at least 15 PKA-regulated, late-developmental target genes whose promoters contain BzpF binding motifs. BzpF is sufficient to activate two of these genes. The comparison of RNA sequencing data between wild type and bzpF− mutant revealed that the mutant fails to express 205 genes, many of which encode cellulose-binding and sugar-binding proteins. We propose that BzpF is a CREB-like transcription factor that regulates spore maturation and stability in a PKA-related manner. ► Dictyostelium bZIP protein BzpF binds to CRE-like sequence with high specificity. ► bzpF is expressed preferentially in spores during late culmination stage. ► Loss of BzpF results in severe defects in spore maturation and stability. ► We found 15 PKA-regulated, late-developmental genes as potential BzpF direct targets. ► Many under-expressed genes in bzpF− encode cellulose- and sugar-binding proteins.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>21810415</pmid><doi>10.1016/j.ydbio.2011.07.017</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record>
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source MEDLINE; Elsevier ScienceDirect Journals Complete; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals
subjects cAMP-dependent protein kinase
CREB-like bZIP transcription factor BzpF
cyclic AMP
Cyclic AMP response element-binding protein
Cyclic AMP Response Element-Binding Protein - genetics
Cyclic AMP Response Element-Binding Protein - metabolism
Cyclic AMP-Dependent Protein Kinases - metabolism
Data processing
Development
Dictyostelium
Dictyostelium - physiology
DNA
DNA microarrays
DNA Primers - genetics
eukaryotic cells
genes
Germination
Late-developmental target genes
Microarray Analysis
microarray technology
mutants
Nucleotide sequence
PKA pathway
Plasmids - genetics
Promoters
Protein arrays
Protein Binding
Protein kinase A
proteins
Reverse Transcriptase Polymerase Chain Reaction
RNA
Sequence Analysis, RNA
Signal Transduction - physiology
Spore maturation
Spore stability
Spores
Spores, Protozoan - growth & development
Spores, Protozoan - metabolism
Transcription factors
title BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium
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