Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes
Bardet-Biedl syndrome (BBS) is genetically heterogeneous with 15 BBS genes currently identified, accounting for approximately 70% of cases. The aim of our study was to define further the spectrum of BBS mutations in a cohort of 44 European-derived American, 8 Tunisian, 1 Arabic, and 2 Pakistani fami...
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creator | Chen, Jianjun Smaoui, Nizar Hammer, Monia Ben Hamed Jiao, Xiaodong Riazuddin, S Amer Harper, Shyana Katsanis, Nicholas Riazuddin, Sheikh Chaabouni, Habiba Berson, Eliot L Hejtmancik, J Fielding |
description | Bardet-Biedl syndrome (BBS) is genetically heterogeneous with 15 BBS genes currently identified, accounting for approximately 70% of cases. The aim of our study was to define further the spectrum of BBS mutations in a cohort of 44 European-derived American, 8 Tunisian, 1 Arabic, and 2 Pakistani families (55 families in total) with BBS.
A total of 142 exons of the first 12 BBS-causing genes were screened by dideoxy sequencing. Cases in which no mutations were found were then screened for BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, and INPP5E.
Forty-three mutations, including 8 frameshift mutations, 10 nonsense mutations, 4 splice site mutations, 1 deletion, and 20 potentially or probably pathogenic missense variations, were identified in 46 of the 55 families studied (84%). Of these, 21 (2 frameshift mutations, 4 nonsense mutations, 4 splice site mutations, 1 deletion, and 10 missense variations) were novel. The molecular genetic findings raised the possibility of triallelic inheritance in 7 Caucasian families, 1 Arabian family, and 1 Tunisian patient. No mutations were detected for BBS4, BBS11, BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, or INPP5E.
This mutational analysis extends the spectrum of known BBS mutations. Identification of 21 novel mutations highlights the genetic heterogeneity of this disorder. Differences in European and Tunisian patients, including the high frequency of the M390R mutation in Europeans, emphasize the population specificity of BBS mutations with potential diagnostic implications. The existence of some BBS cases without mutations in any currently identified BBS genes suggests further genetic heterogeneity. |
doi_str_mv | 10.1167/iovs.11-7554 |
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A total of 142 exons of the first 12 BBS-causing genes were screened by dideoxy sequencing. Cases in which no mutations were found were then screened for BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, and INPP5E.
Forty-three mutations, including 8 frameshift mutations, 10 nonsense mutations, 4 splice site mutations, 1 deletion, and 20 potentially or probably pathogenic missense variations, were identified in 46 of the 55 families studied (84%). Of these, 21 (2 frameshift mutations, 4 nonsense mutations, 4 splice site mutations, 1 deletion, and 10 missense variations) were novel. The molecular genetic findings raised the possibility of triallelic inheritance in 7 Caucasian families, 1 Arabian family, and 1 Tunisian patient. No mutations were detected for BBS4, BBS11, BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, or INPP5E.
This mutational analysis extends the spectrum of known BBS mutations. Identification of 21 novel mutations highlights the genetic heterogeneity of this disorder. Differences in European and Tunisian patients, including the high frequency of the M390R mutation in Europeans, emphasize the population specificity of BBS mutations with potential diagnostic implications. The existence of some BBS cases without mutations in any currently identified BBS genes suggests further genetic heterogeneity.</description><identifier>ISSN: 1552-5783</identifier><identifier>ISSN: 0146-0404</identifier><identifier>EISSN: 1552-5783</identifier><identifier>DOI: 10.1167/iovs.11-7554</identifier><identifier>PMID: 21642631</identifier><language>eng</language><publisher>United States: Association for Research in Vision and Ophthalmology, Inc</publisher><subject>African Continental Ancestry Group ; Asian Continental Ancestry Group ; Bardet-Biedl Syndrome - diagnosis ; Bardet-Biedl Syndrome - genetics ; DNA Mutational Analysis ; Ethnic Groups ; European Continental Ancestry Group ; Exons - genetics ; Gene Frequency ; Humans ; Mutation ; Polymerase Chain Reaction ; Proteins - genetics</subject><ispartof>Investigative ophthalmology & visual science, 2011-07, Vol.52 (8), p.5317-5324</ispartof><rights>Copyright © Association for Research in Vision and Ophthalmology 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c449t-8be12f9dc430133a37529145574992d11224827d49922dd696ecbff59eefe0bf3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176075/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176075/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21642631$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Jianjun</creatorcontrib><creatorcontrib>Smaoui, Nizar</creatorcontrib><creatorcontrib>Hammer, Monia Ben Hamed</creatorcontrib><creatorcontrib>Jiao, Xiaodong</creatorcontrib><creatorcontrib>Riazuddin, S Amer</creatorcontrib><creatorcontrib>Harper, Shyana</creatorcontrib><creatorcontrib>Katsanis, Nicholas</creatorcontrib><creatorcontrib>Riazuddin, Sheikh</creatorcontrib><creatorcontrib>Chaabouni, Habiba</creatorcontrib><creatorcontrib>Berson, Eliot L</creatorcontrib><creatorcontrib>Hejtmancik, J Fielding</creatorcontrib><title>Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes</title><title>Investigative ophthalmology & visual science</title><addtitle>Invest Ophthalmol Vis Sci</addtitle><description>Bardet-Biedl syndrome (BBS) is genetically heterogeneous with 15 BBS genes currently identified, accounting for approximately 70% of cases. The aim of our study was to define further the spectrum of BBS mutations in a cohort of 44 European-derived American, 8 Tunisian, 1 Arabic, and 2 Pakistani families (55 families in total) with BBS.
A total of 142 exons of the first 12 BBS-causing genes were screened by dideoxy sequencing. Cases in which no mutations were found were then screened for BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, and INPP5E.
Forty-three mutations, including 8 frameshift mutations, 10 nonsense mutations, 4 splice site mutations, 1 deletion, and 20 potentially or probably pathogenic missense variations, were identified in 46 of the 55 families studied (84%). Of these, 21 (2 frameshift mutations, 4 nonsense mutations, 4 splice site mutations, 1 deletion, and 10 missense variations) were novel. The molecular genetic findings raised the possibility of triallelic inheritance in 7 Caucasian families, 1 Arabian family, and 1 Tunisian patient. No mutations were detected for BBS4, BBS11, BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, or INPP5E.
This mutational analysis extends the spectrum of known BBS mutations. Identification of 21 novel mutations highlights the genetic heterogeneity of this disorder. Differences in European and Tunisian patients, including the high frequency of the M390R mutation in Europeans, emphasize the population specificity of BBS mutations with potential diagnostic implications. The existence of some BBS cases without mutations in any currently identified BBS genes suggests further genetic heterogeneity.</description><subject>African Continental Ancestry Group</subject><subject>Asian Continental Ancestry Group</subject><subject>Bardet-Biedl Syndrome - diagnosis</subject><subject>Bardet-Biedl Syndrome - genetics</subject><subject>DNA Mutational Analysis</subject><subject>Ethnic Groups</subject><subject>European Continental Ancestry Group</subject><subject>Exons - genetics</subject><subject>Gene Frequency</subject><subject>Humans</subject><subject>Mutation</subject><subject>Polymerase Chain Reaction</subject><subject>Proteins - genetics</subject><issn>1552-5783</issn><issn>0146-0404</issn><issn>1552-5783</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkUtLxTAQhYMovneuJTs3VvNomtaF4BVfoLjRrSG3mWgkTa5Je-H-e1t8oKs5w3ycOXAQOqDkhNJKnrq4zKMqpBDlGtqmQrBCyJqv_9FbaCfnd0IYpYxsoi1Gq5JVnG6jl4fooR28TlgH7VfZZRwtnulkoC9mDozHeRVMih1gqzvnHeQznGARUz-RjOIQl-BxN_S6dzFk7AKmBL9CgLyHNqz2Gfa_5y56vr56urwt7h9v7i4v7ou2LJu-qOdAmW1MW3JCOddcCtbQUghZNg0zY2pW1kyaaWPGVE0F7dxa0QBYIHPLd9H5l-9imHdgWgh90l4tkut0Wqmonfp_Ce5Nvcal4lRWRIrR4OjbIMWPAXKvOpdb8F4HiENWtRz_11VFRvL4i2xTzDmB_f1CiZoaUVMjo1JTIyN--DfZL_xTAf8ECGKIIw</recordid><startdate>20110718</startdate><enddate>20110718</enddate><creator>Chen, Jianjun</creator><creator>Smaoui, Nizar</creator><creator>Hammer, Monia Ben Hamed</creator><creator>Jiao, Xiaodong</creator><creator>Riazuddin, S Amer</creator><creator>Harper, Shyana</creator><creator>Katsanis, Nicholas</creator><creator>Riazuddin, Sheikh</creator><creator>Chaabouni, Habiba</creator><creator>Berson, Eliot L</creator><creator>Hejtmancik, J Fielding</creator><general>Association for Research in Vision and Ophthalmology, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20110718</creationdate><title>Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes</title><author>Chen, Jianjun ; Smaoui, Nizar ; Hammer, Monia Ben Hamed ; Jiao, Xiaodong ; Riazuddin, S Amer ; Harper, Shyana ; Katsanis, Nicholas ; Riazuddin, Sheikh ; Chaabouni, Habiba ; Berson, Eliot L ; Hejtmancik, J Fielding</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c449t-8be12f9dc430133a37529145574992d11224827d49922dd696ecbff59eefe0bf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>African Continental Ancestry Group</topic><topic>Asian Continental Ancestry Group</topic><topic>Bardet-Biedl Syndrome - diagnosis</topic><topic>Bardet-Biedl Syndrome - genetics</topic><topic>DNA Mutational Analysis</topic><topic>Ethnic Groups</topic><topic>European Continental Ancestry Group</topic><topic>Exons - genetics</topic><topic>Gene Frequency</topic><topic>Humans</topic><topic>Mutation</topic><topic>Polymerase Chain Reaction</topic><topic>Proteins - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Jianjun</creatorcontrib><creatorcontrib>Smaoui, Nizar</creatorcontrib><creatorcontrib>Hammer, Monia Ben Hamed</creatorcontrib><creatorcontrib>Jiao, Xiaodong</creatorcontrib><creatorcontrib>Riazuddin, S Amer</creatorcontrib><creatorcontrib>Harper, Shyana</creatorcontrib><creatorcontrib>Katsanis, Nicholas</creatorcontrib><creatorcontrib>Riazuddin, Sheikh</creatorcontrib><creatorcontrib>Chaabouni, Habiba</creatorcontrib><creatorcontrib>Berson, Eliot L</creatorcontrib><creatorcontrib>Hejtmancik, J Fielding</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Investigative ophthalmology & visual science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Jianjun</au><au>Smaoui, Nizar</au><au>Hammer, Monia Ben Hamed</au><au>Jiao, Xiaodong</au><au>Riazuddin, S Amer</au><au>Harper, Shyana</au><au>Katsanis, Nicholas</au><au>Riazuddin, Sheikh</au><au>Chaabouni, Habiba</au><au>Berson, Eliot L</au><au>Hejtmancik, J Fielding</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes</atitle><jtitle>Investigative ophthalmology & visual science</jtitle><addtitle>Invest Ophthalmol Vis Sci</addtitle><date>2011-07-18</date><risdate>2011</risdate><volume>52</volume><issue>8</issue><spage>5317</spage><epage>5324</epage><pages>5317-5324</pages><issn>1552-5783</issn><issn>0146-0404</issn><eissn>1552-5783</eissn><abstract>Bardet-Biedl syndrome (BBS) is genetically heterogeneous with 15 BBS genes currently identified, accounting for approximately 70% of cases. The aim of our study was to define further the spectrum of BBS mutations in a cohort of 44 European-derived American, 8 Tunisian, 1 Arabic, and 2 Pakistani families (55 families in total) with BBS.
A total of 142 exons of the first 12 BBS-causing genes were screened by dideoxy sequencing. Cases in which no mutations were found were then screened for BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, and INPP5E.
Forty-three mutations, including 8 frameshift mutations, 10 nonsense mutations, 4 splice site mutations, 1 deletion, and 20 potentially or probably pathogenic missense variations, were identified in 46 of the 55 families studied (84%). Of these, 21 (2 frameshift mutations, 4 nonsense mutations, 4 splice site mutations, 1 deletion, and 10 missense variations) were novel. The molecular genetic findings raised the possibility of triallelic inheritance in 7 Caucasian families, 1 Arabian family, and 1 Tunisian patient. No mutations were detected for BBS4, BBS11, BBS13, BBS14, BBS15, RPGRIP1L, CC2D2A, NPHP3, TMEM67, or INPP5E.
This mutational analysis extends the spectrum of known BBS mutations. Identification of 21 novel mutations highlights the genetic heterogeneity of this disorder. Differences in European and Tunisian patients, including the high frequency of the M390R mutation in Europeans, emphasize the population specificity of BBS mutations with potential diagnostic implications. The existence of some BBS cases without mutations in any currently identified BBS genes suggests further genetic heterogeneity.</abstract><cop>United States</cop><pub>Association for Research in Vision and Ophthalmology, Inc</pub><pmid>21642631</pmid><doi>10.1167/iovs.11-7554</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | African Continental Ancestry Group Asian Continental Ancestry Group Bardet-Biedl Syndrome - diagnosis Bardet-Biedl Syndrome - genetics DNA Mutational Analysis Ethnic Groups European Continental Ancestry Group Exons - genetics Gene Frequency Humans Mutation Polymerase Chain Reaction Proteins - genetics |
title | Molecular analysis of Bardet-Biedl syndrome families: report of 21 novel mutations in 10 genes |
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