Human microRNA hsa-miR-125a-5p interferes with expression of hepatitis B virus surface antigen
MicroRNAs are small non-coding RNAs that modulate gene expression at post-transcriptional level, playing a crucial role in cell differentiation and development. Recently, some reports have shown that a limited number of mammalian microRNAs are also involved in anti-viral defense. In this study, the...
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Veröffentlicht in: | Nucleic acids research 2011-07, Vol.39 (12), p.5157-5163 |
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description | MicroRNAs are small non-coding RNAs that modulate gene expression at post-transcriptional level, playing a crucial role in cell differentiation and development. Recently, some reports have shown that a limited number of mammalian microRNAs are also involved in anti-viral defense. In this study, the analysis of the hepatitis B virus (HBV) genome by the computer program MiRanda led to the identification of seven sites that are potential targets for human liver microRNAs. These sites were found to be clustered in a 995-bp segment within the viral polymerase ORF and the overlapping surface antigen ORF, and conserved among the most common HBV subtypes. The HBV genomic targets were then subjected to a validation test based on cultured hepatic cells (HepG2, HuH-7 and PLC/PRF/5) and luciferase reporter genes. In this test, one of the selected microRNAs, hsa-miR-125a-5p, was found to interact with the viral sequence and to suppress the reporter activity markedly. The microRNA was then shown to interfere with the viral translation, down-regulating the expression of the surface antigen. Overall, these results support the emerging concept that some mammalian microRNAs play a role in virus-host interaction. Furthermore, they provide the basis for the development of new strategies for anti-HBV intervention. |
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Recently, some reports have shown that a limited number of mammalian microRNAs are also involved in anti-viral defense. In this study, the analysis of the hepatitis B virus (HBV) genome by the computer program MiRanda led to the identification of seven sites that are potential targets for human liver microRNAs. These sites were found to be clustered in a 995-bp segment within the viral polymerase ORF and the overlapping surface antigen ORF, and conserved among the most common HBV subtypes. The HBV genomic targets were then subjected to a validation test based on cultured hepatic cells (HepG2, HuH-7 and PLC/PRF/5) and luciferase reporter genes. In this test, one of the selected microRNAs, hsa-miR-125a-5p, was found to interact with the viral sequence and to suppress the reporter activity markedly. The microRNA was then shown to interfere with the viral translation, down-regulating the expression of the surface antigen. Overall, these results support the emerging concept that some mammalian microRNAs play a role in virus-host interaction. Furthermore, they provide the basis for the development of new strategies for anti-HBV intervention.</description><identifier>ISSN: 0305-1048</identifier><identifier>EISSN: 1362-4962</identifier><identifier>DOI: 10.1093/nar/gkr067</identifier><identifier>PMID: 21317190</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Cell Line, Tumor ; Genome, Viral ; Hepatitis B Surface Antigens - biosynthesis ; Hepatitis B Surface Antigens - genetics ; Hepatitis B virus ; Hepatitis B virus - genetics ; Humans ; Liver - metabolism ; MicroRNAs - metabolism ; Protein Biosynthesis ; RNA ; RNA Interference</subject><ispartof>Nucleic acids research, 2011-07, Vol.39 (12), p.5157-5163</ispartof><rights>The Author(s) 2011. Published by Oxford University Press. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-3ede19946c03bcb37c61387e8c202c52108ba3bf3cbc3a78562db64210131de83</citedby><cites>FETCH-LOGICAL-c439t-3ede19946c03bcb37c61387e8c202c52108ba3bf3cbc3a78562db64210131de83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130258/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130258/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,1598,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21317190$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Potenza, Nicoletta</creatorcontrib><creatorcontrib>Papa, Umberto</creatorcontrib><creatorcontrib>Mosca, Nicola</creatorcontrib><creatorcontrib>Zerbini, Francesca</creatorcontrib><creatorcontrib>Nobile, Valentina</creatorcontrib><creatorcontrib>Russo, Aniello</creatorcontrib><title>Human microRNA hsa-miR-125a-5p interferes with expression of hepatitis B virus surface antigen</title><title>Nucleic acids research</title><addtitle>Nucleic Acids Res</addtitle><description>MicroRNAs are small non-coding RNAs that modulate gene expression at post-transcriptional level, playing a crucial role in cell differentiation and development. Recently, some reports have shown that a limited number of mammalian microRNAs are also involved in anti-viral defense. In this study, the analysis of the hepatitis B virus (HBV) genome by the computer program MiRanda led to the identification of seven sites that are potential targets for human liver microRNAs. These sites were found to be clustered in a 995-bp segment within the viral polymerase ORF and the overlapping surface antigen ORF, and conserved among the most common HBV subtypes. The HBV genomic targets were then subjected to a validation test based on cultured hepatic cells (HepG2, HuH-7 and PLC/PRF/5) and luciferase reporter genes. In this test, one of the selected microRNAs, hsa-miR-125a-5p, was found to interact with the viral sequence and to suppress the reporter activity markedly. The microRNA was then shown to interfere with the viral translation, down-regulating the expression of the surface antigen. Overall, these results support the emerging concept that some mammalian microRNAs play a role in virus-host interaction. Furthermore, they provide the basis for the development of new strategies for anti-HBV intervention.</description><subject>Cell Line, Tumor</subject><subject>Genome, Viral</subject><subject>Hepatitis B Surface Antigens - biosynthesis</subject><subject>Hepatitis B Surface Antigens - genetics</subject><subject>Hepatitis B virus</subject><subject>Hepatitis B virus - genetics</subject><subject>Humans</subject><subject>Liver - metabolism</subject><subject>MicroRNAs - metabolism</subject><subject>Protein Biosynthesis</subject><subject>RNA</subject><subject>RNA Interference</subject><issn>0305-1048</issn><issn>1362-4962</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>TOX</sourceid><sourceid>EIF</sourceid><recordid>eNqNkUFLJDEQhYOs6Kx68QdILouw0JpKutPJRVBxVRAF0ashnameye50uk261f33toyKXsRTFVUfj3r1CNkGtgdMi_1g4_7sX2SyXCETEJJnuZb8B5kwwYoMWK7Wyc-U_jIGORT5GlnnIKAEzSbk7mxobKCNd7G9vjyk82Szxl9nwAubFR31ocdYY8REH30_p_jUjX3ybaBtTefY2d73PtEj-uDjkGgaYm0dUht6P8OwSVZru0i49Vo3yO2fk5vjs-zi6vT8-PAic7nQfSZwiqB1Lh0TlatE6SQIVaJynHFXcGCqsqKqhaucsKUqJJ9WMh_no5EpKrFBDpa63VA1OHUY-mgXpou-sfG_aa03nzfBz82sfTACBOPFi8Duq0Bs7wdMvWl8crhY2IDtkIzSGqTU_BtkWZSgVKlH8veSHH-bUsT6_R5g5iU5MyZnlsmN8M5HB-_oW1Qj8GsJtEP3ldAz-Z-iNA</recordid><startdate>20110701</startdate><enddate>20110701</enddate><creator>Potenza, Nicoletta</creator><creator>Papa, Umberto</creator><creator>Mosca, Nicola</creator><creator>Zerbini, Francesca</creator><creator>Nobile, Valentina</creator><creator>Russo, Aniello</creator><general>Oxford University Press</general><scope>TOX</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope></search><sort><creationdate>20110701</creationdate><title>Human microRNA hsa-miR-125a-5p interferes with expression of hepatitis B virus surface antigen</title><author>Potenza, Nicoletta ; Papa, Umberto ; Mosca, Nicola ; Zerbini, Francesca ; Nobile, Valentina ; Russo, Aniello</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-3ede19946c03bcb37c61387e8c202c52108ba3bf3cbc3a78562db64210131de83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Cell Line, Tumor</topic><topic>Genome, Viral</topic><topic>Hepatitis B Surface Antigens - biosynthesis</topic><topic>Hepatitis B Surface Antigens - genetics</topic><topic>Hepatitis B virus</topic><topic>Hepatitis B virus - genetics</topic><topic>Humans</topic><topic>Liver - metabolism</topic><topic>MicroRNAs - metabolism</topic><topic>Protein Biosynthesis</topic><topic>RNA</topic><topic>RNA Interference</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Potenza, Nicoletta</creatorcontrib><creatorcontrib>Papa, Umberto</creatorcontrib><creatorcontrib>Mosca, Nicola</creatorcontrib><creatorcontrib>Zerbini, Francesca</creatorcontrib><creatorcontrib>Nobile, Valentina</creatorcontrib><creatorcontrib>Russo, Aniello</creatorcontrib><collection>Oxford Journals Open Access Collection</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nucleic acids research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Potenza, Nicoletta</au><au>Papa, Umberto</au><au>Mosca, Nicola</au><au>Zerbini, Francesca</au><au>Nobile, Valentina</au><au>Russo, Aniello</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Human microRNA hsa-miR-125a-5p interferes with expression of hepatitis B virus surface antigen</atitle><jtitle>Nucleic acids research</jtitle><addtitle>Nucleic Acids Res</addtitle><date>2011-07-01</date><risdate>2011</risdate><volume>39</volume><issue>12</issue><spage>5157</spage><epage>5163</epage><pages>5157-5163</pages><issn>0305-1048</issn><eissn>1362-4962</eissn><abstract>MicroRNAs are small non-coding RNAs that modulate gene expression at post-transcriptional level, playing a crucial role in cell differentiation and development. Recently, some reports have shown that a limited number of mammalian microRNAs are also involved in anti-viral defense. In this study, the analysis of the hepatitis B virus (HBV) genome by the computer program MiRanda led to the identification of seven sites that are potential targets for human liver microRNAs. These sites were found to be clustered in a 995-bp segment within the viral polymerase ORF and the overlapping surface antigen ORF, and conserved among the most common HBV subtypes. The HBV genomic targets were then subjected to a validation test based on cultured hepatic cells (HepG2, HuH-7 and PLC/PRF/5) and luciferase reporter genes. In this test, one of the selected microRNAs, hsa-miR-125a-5p, was found to interact with the viral sequence and to suppress the reporter activity markedly. The microRNA was then shown to interfere with the viral translation, down-regulating the expression of the surface antigen. 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subjects | Cell Line, Tumor Genome, Viral Hepatitis B Surface Antigens - biosynthesis Hepatitis B Surface Antigens - genetics Hepatitis B virus Hepatitis B virus - genetics Humans Liver - metabolism MicroRNAs - metabolism Protein Biosynthesis RNA RNA Interference |
title | Human microRNA hsa-miR-125a-5p interferes with expression of hepatitis B virus surface antigen |
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