Ribosomal Database project

The Ribosomal Database Project (RDP) is a curated database that offers ribosome-related data, analysis services, and associated computer programs. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagram...

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Veröffentlicht in:Nucleic acids research 1994-09, Vol.22 (17), p.3485-3487
Hauptverfasser: Maidak, B.L, Larsen, N, McCaughey, M.J, Overbeek, R, Olsen, G.J, Fogel, K, Blandy, J, Woese, C.R
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container_end_page 3487
container_issue 17
container_start_page 3485
container_title Nucleic acids research
container_volume 22
creator Maidak, B.L
Larsen, N
McCaughey, M.J
Overbeek, R
Olsen, G.J
Fogel, K
Blandy, J
Woese, C.R
description The Ribosomal Database Project (RDP) is a curated database that offers ribosome-related data, analysis services, and associated computer programs. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagrams, and various software for handling, analyzing and displaying alignments and trees. The data are available via anonymous ftp (rdp.life.uiuc.edu), electronic mail (server@rdp.life.uiuc.edu) and gopher (rdpgopher.life.uiuc.edu). The electronic mail server also provides ribosomal probe checking, approximate phylogenetic placement of user-submitted sequences, screening for chimeric nature of newly sequenced rRNAs, and automated alignment.
doi_str_mv 10.1093/nar/22.17.3485
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source MEDLINE; Oxford University Press Archive; PubMed Central
subjects Animals
Computer Communication Networks
computer software
Databases, Factual
information retrieval
information services
molecular conformation
Nucleic Acid Conformation
nucleotide sequences
Phylogeny
protein secondary structure
ribosomal RNA
RNA, Bacterial - chemistry
RNA, Fungal - chemistry
RNA, Plant - chemistry
RNA, Ribosomal - chemistry
RNA, Ribosomal - genetics
Sequence Alignment
Software
Space life sciences
title Ribosomal Database project
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