Presenting your structures: the CCP4mg molecular-graphics software
CCP4mg is a molecular‐graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom‐selection options and a wizard to...
Gespeichert in:
Veröffentlicht in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 2011-04, Vol.67 (4), p.386-394 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 394 |
---|---|
container_issue | 4 |
container_start_page | 386 |
container_title | Acta crystallographica. Section D, Biological crystallography. |
container_volume | 67 |
creator | McNicholas, S. Potterton, E. Wilson, K. S. Noble, M. E. M. |
description | CCP4mg is a molecular‐graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom‐selection options and a wizard to facilitate the generation of complex scenes. These scenes may contain a mixture of coordinate‐derived and graphical objects, including text objects, arbitrary vectors, geometric objects and imported images, which can enhance a picture and eliminate the need for subsequent editing. Scene descriptions can be saved to file and transferred to other molecules. Here, the substantially enhanced version 2 of the program, with a new underlying GUI toolkit, is described. A built‐in rendering module produces publication‐quality images. |
doi_str_mv | 10.1107/S0907444911007281 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3069754</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>860186815</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4005-4fcfe74a7fe464227f0869df67f956a940ad968f875e18ac3e132788d9859b2c3</originalsourceid><addsrcrecordid>eNplUctOwzAQtBCIR-EDuKDcOAXWiZ8ckNoCLRICBEWIk2Vcuw0kTbETSv-eVC0ViNO-ZmZXOwgdYjjBGPjpI0jghBDZVMATgTfQLk6ljAEI3_yV76C9EN4AIElSvo12EkwYEMp3Uefe22AnVTYZRfOy9lGofG2quumeRdXYRt3uPSlGUVHm1tS59vHI6-k4MyEKpatm2tt9tOV0HuzBKrbQ09XloNuPb-561932TWwIAI2JM85yormzhJEk4Q4Ek0PHuJOUaUlADyUTTnBqsdAmtThNuBBDKah8TUzaQudL3Wn9Wtihaa72OldTnxXaz1WpM_V3MsnGalR-qhSY5JQ0AscrAV9-1DZUqsiCsXmuJ7asgxIMsGAC0wZ59HvVesfP3xqAWAJmWW7n6zkGtTBG_TNGtV8uOm2K2UI7XlKzUNmvNVX7d8V4yql6vu2pAcbsgfcHiqXfIViPjA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>860186815</pqid></control><display><type>article</type><title>Presenting your structures: the CCP4mg molecular-graphics software</title><source>MEDLINE</source><source>Wiley Online Library Journals Frontfile Complete</source><source>Alma/SFX Local Collection</source><creator>McNicholas, S. ; Potterton, E. ; Wilson, K. S. ; Noble, M. E. M.</creator><creatorcontrib>McNicholas, S. ; Potterton, E. ; Wilson, K. S. ; Noble, M. E. M.</creatorcontrib><description>CCP4mg is a molecular‐graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom‐selection options and a wizard to facilitate the generation of complex scenes. These scenes may contain a mixture of coordinate‐derived and graphical objects, including text objects, arbitrary vectors, geometric objects and imported images, which can enhance a picture and eliminate the need for subsequent editing. Scene descriptions can be saved to file and transferred to other molecules. Here, the substantially enhanced version 2 of the program, with a new underlying GUI toolkit, is described. A built‐in rendering module produces publication‐quality images.</description><identifier>ISSN: 1399-0047</identifier><identifier>ISSN: 0907-4449</identifier><identifier>EISSN: 1399-0047</identifier><identifier>DOI: 10.1107/S0907444911007281</identifier><identifier>PMID: 21460457</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>Amino Acid Sequence ; CCP4mg ; Computer Graphics ; crystallographic software ; Crystallography, X-Ray - methods ; Databases, Protein ; Models, Molecular ; molecular graphics ; Molecular Sequence Data ; movies ; Protein Structure, Quaternary ; Protein Structure, Tertiary ; Proteins - analysis ; Research Papers ; Sequence Alignment ; Software Design ; Surface Properties</subject><ispartof>Acta crystallographica. Section D, Biological crystallography., 2011-04, Vol.67 (4), p.386-394</ispartof><rights>McNicholas et al. 2011</rights><rights>McNicholas et al. 2011 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4005-4fcfe74a7fe464227f0869df67f956a940ad968f875e18ac3e132788d9859b2c3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1107%2FS0907444911007281$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1107%2FS0907444911007281$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,776,780,881,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21460457$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>McNicholas, S.</creatorcontrib><creatorcontrib>Potterton, E.</creatorcontrib><creatorcontrib>Wilson, K. S.</creatorcontrib><creatorcontrib>Noble, M. E. M.</creatorcontrib><title>Presenting your structures: the CCP4mg molecular-graphics software</title><title>Acta crystallographica. Section D, Biological crystallography.</title><addtitle>Acta Cryst. D</addtitle><description>CCP4mg is a molecular‐graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom‐selection options and a wizard to facilitate the generation of complex scenes. These scenes may contain a mixture of coordinate‐derived and graphical objects, including text objects, arbitrary vectors, geometric objects and imported images, which can enhance a picture and eliminate the need for subsequent editing. Scene descriptions can be saved to file and transferred to other molecules. Here, the substantially enhanced version 2 of the program, with a new underlying GUI toolkit, is described. A built‐in rendering module produces publication‐quality images.</description><subject>Amino Acid Sequence</subject><subject>CCP4mg</subject><subject>Computer Graphics</subject><subject>crystallographic software</subject><subject>Crystallography, X-Ray - methods</subject><subject>Databases, Protein</subject><subject>Models, Molecular</subject><subject>molecular graphics</subject><subject>Molecular Sequence Data</subject><subject>movies</subject><subject>Protein Structure, Quaternary</subject><subject>Protein Structure, Tertiary</subject><subject>Proteins - analysis</subject><subject>Research Papers</subject><subject>Sequence Alignment</subject><subject>Software Design</subject><subject>Surface Properties</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNplUctOwzAQtBCIR-EDuKDcOAXWiZ8ckNoCLRICBEWIk2Vcuw0kTbETSv-eVC0ViNO-ZmZXOwgdYjjBGPjpI0jghBDZVMATgTfQLk6ljAEI3_yV76C9EN4AIElSvo12EkwYEMp3Uefe22AnVTYZRfOy9lGofG2quumeRdXYRt3uPSlGUVHm1tS59vHI6-k4MyEKpatm2tt9tOV0HuzBKrbQ09XloNuPb-561932TWwIAI2JM85yormzhJEk4Q4Ek0PHuJOUaUlADyUTTnBqsdAmtThNuBBDKah8TUzaQudL3Wn9Wtihaa72OldTnxXaz1WpM_V3MsnGalR-qhSY5JQ0AscrAV9-1DZUqsiCsXmuJ7asgxIMsGAC0wZ59HvVesfP3xqAWAJmWW7n6zkGtTBG_TNGtV8uOm2K2UI7XlKzUNmvNVX7d8V4yql6vu2pAcbsgfcHiqXfIViPjA</recordid><startdate>201104</startdate><enddate>201104</enddate><creator>McNicholas, S.</creator><creator>Potterton, E.</creator><creator>Wilson, K. S.</creator><creator>Noble, M. E. M.</creator><general>International Union of Crystallography</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>201104</creationdate><title>Presenting your structures: the CCP4mg molecular-graphics software</title><author>McNicholas, S. ; Potterton, E. ; Wilson, K. S. ; Noble, M. E. M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4005-4fcfe74a7fe464227f0869df67f956a940ad968f875e18ac3e132788d9859b2c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Amino Acid Sequence</topic><topic>CCP4mg</topic><topic>Computer Graphics</topic><topic>crystallographic software</topic><topic>Crystallography, X-Ray - methods</topic><topic>Databases, Protein</topic><topic>Models, Molecular</topic><topic>molecular graphics</topic><topic>Molecular Sequence Data</topic><topic>movies</topic><topic>Protein Structure, Quaternary</topic><topic>Protein Structure, Tertiary</topic><topic>Proteins - analysis</topic><topic>Research Papers</topic><topic>Sequence Alignment</topic><topic>Software Design</topic><topic>Surface Properties</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>McNicholas, S.</creatorcontrib><creatorcontrib>Potterton, E.</creatorcontrib><creatorcontrib>Wilson, K. S.</creatorcontrib><creatorcontrib>Noble, M. E. M.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McNicholas, S.</au><au>Potterton, E.</au><au>Wilson, K. S.</au><au>Noble, M. E. M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Presenting your structures: the CCP4mg molecular-graphics software</atitle><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle><addtitle>Acta Cryst. D</addtitle><date>2011-04</date><risdate>2011</risdate><volume>67</volume><issue>4</issue><spage>386</spage><epage>394</epage><pages>386-394</pages><issn>1399-0047</issn><issn>0907-4449</issn><eissn>1399-0047</eissn><abstract>CCP4mg is a molecular‐graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom‐selection options and a wizard to facilitate the generation of complex scenes. These scenes may contain a mixture of coordinate‐derived and graphical objects, including text objects, arbitrary vectors, geometric objects and imported images, which can enhance a picture and eliminate the need for subsequent editing. Scene descriptions can be saved to file and transferred to other molecules. Here, the substantially enhanced version 2 of the program, with a new underlying GUI toolkit, is described. A built‐in rendering module produces publication‐quality images.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>21460457</pmid><doi>10.1107/S0907444911007281</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1399-0047 |
ispartof | Acta crystallographica. Section D, Biological crystallography., 2011-04, Vol.67 (4), p.386-394 |
issn | 1399-0047 0907-4449 1399-0047 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_3069754 |
source | MEDLINE; Wiley Online Library Journals Frontfile Complete; Alma/SFX Local Collection |
subjects | Amino Acid Sequence CCP4mg Computer Graphics crystallographic software Crystallography, X-Ray - methods Databases, Protein Models, Molecular molecular graphics Molecular Sequence Data movies Protein Structure, Quaternary Protein Structure, Tertiary Proteins - analysis Research Papers Sequence Alignment Software Design Surface Properties |
title | Presenting your structures: the CCP4mg molecular-graphics software |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-31T04%3A58%3A34IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Presenting%20your%20structures:%20the%20CCP4mg%20molecular-graphics%20software&rft.jtitle=Acta%20crystallographica.%20Section%20D,%20Biological%20crystallography.&rft.au=McNicholas,%20S.&rft.date=2011-04&rft.volume=67&rft.issue=4&rft.spage=386&rft.epage=394&rft.pages=386-394&rft.issn=1399-0047&rft.eissn=1399-0047&rft_id=info:doi/10.1107/S0907444911007281&rft_dat=%3Cproquest_pubme%3E860186815%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=860186815&rft_id=info:pmid/21460457&rfr_iscdi=true |