Diffusion and Sedimentation Interaction Parameters for Measuring the Second Virial Coefficient and Their Utility as Predictors of Protein Aggregation
The concentration-dependence of the diffusion and sedimentation coefficients ( k D and k s , respectively) of a protein can be used to determine the second virial coefficient ( B 2), a parameter valuable in predicting protein-protein interactions. Accurate measurement of B 2 under physiologically an...
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creator | Saluja, Atul Fesinmeyer, R. Matthew Hogan, Sabine Brems, David N. Gokarn, Yatin R. |
description | The concentration-dependence of the diffusion and sedimentation coefficients (
k
D
and
k
s
, respectively) of a protein can be used to determine the second virial coefficient (
B
2), a parameter valuable in predicting protein-protein interactions. Accurate measurement of
B
2 under physiologically and pharmaceutically relevant conditions, however, requires independent measurement of
k
D
and
k
s
via orthogonal techniques. We demonstrate this by utilizing sedimentation velocity (SV) and dynamic light scattering (DLS) to analyze solutions of hen-egg white lysozyme (HEWL) and a monoclonal antibody (mAb1) in different salt solutions. The accuracy of the SV-DLS method was established by comparing measured and literature
B
2 values for HEWL. In contrast to the assumptions necessary for determining
k
D
and
k
s
via SV alone,
k
D
and
ks were of comparable magnitudes, and solution conditions were noted for both HEWL and mAb1 under which 1),
k
D
and
k
s
assumed opposite signs; and 2),
k
D
≥
k
s
. Further, we demonstrate the utility of
k
D
and
k
s
as qualitative predictors of protein aggregation through agitation and accelerated stability studies. Aggregation of mAb1 correlated well with
B
2,
k
D
, and
k
s
, thus establishing the potential for
k
D
to serve as a high-throughput predictor of protein aggregation. |
doi_str_mv | 10.1016/j.bpj.2010.08.020 |
format | Article |
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k
D
and
k
s
, respectively) of a protein can be used to determine the second virial coefficient (
B
2), a parameter valuable in predicting protein-protein interactions. Accurate measurement of
B
2 under physiologically and pharmaceutically relevant conditions, however, requires independent measurement of
k
D
and
k
s
via orthogonal techniques. We demonstrate this by utilizing sedimentation velocity (SV) and dynamic light scattering (DLS) to analyze solutions of hen-egg white lysozyme (HEWL) and a monoclonal antibody (mAb1) in different salt solutions. The accuracy of the SV-DLS method was established by comparing measured and literature
B
2 values for HEWL. In contrast to the assumptions necessary for determining
k
D
and
k
s
via SV alone,
k
D
and
ks were of comparable magnitudes, and solution conditions were noted for both HEWL and mAb1 under which 1),
k
D
and
k
s
assumed opposite signs; and 2),
k
D
≥
k
s
. Further, we demonstrate the utility of
k
D
and
k
s
as qualitative predictors of protein aggregation through agitation and accelerated stability studies. Aggregation of mAb1 correlated well with
B
2,
k
D
, and
k
s
, thus establishing the potential for
k
D
to serve as a high-throughput predictor of protein aggregation.</description><identifier>ISSN: 0006-3495</identifier><identifier>EISSN: 1542-0086</identifier><identifier>DOI: 10.1016/j.bpj.2010.08.020</identifier><identifier>PMID: 20959107</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Agglomeration ; Animals ; Antibodies, Monoclonal - chemistry ; Antibodies, Monoclonal - metabolism ; Biophysics ; Diffusion ; Dynamic tests ; Hot Temperature ; Immunoglobulin G - chemistry ; Immunoglobulin G - metabolism ; Interaction parameters ; Measurement ; Motion ; Muramidase - chemistry ; Muramidase - metabolism ; Protein ; Protein Multimerization ; Protein Stability ; Protein Structure, Quaternary ; Proteins ; Proteins - chemistry ; Proteins - metabolism ; Sedimentation ; Sedimentation & deposition ; Utilities ; Virial coefficients</subject><ispartof>Biophysical journal, 2010-10, Vol.99 (8), p.2657-2665</ispartof><rights>2010 Biophysical Society</rights><rights>Copyright © 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.</rights><rights>Copyright Biophysical Society Oct 20, 2010</rights><rights>2010 by the Biophysical Society. 2010 Biophysical Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c509t-4dea10eb35acae016c3037fc0dea994fdd221b96e9daab6412bf7e858ee7c3133</citedby><cites>FETCH-LOGICAL-c509t-4dea10eb35acae016c3037fc0dea994fdd221b96e9daab6412bf7e858ee7c3133</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955502/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bpj.2010.08.020$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,3550,27924,27925,45995,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20959107$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Saluja, Atul</creatorcontrib><creatorcontrib>Fesinmeyer, R. Matthew</creatorcontrib><creatorcontrib>Hogan, Sabine</creatorcontrib><creatorcontrib>Brems, David N.</creatorcontrib><creatorcontrib>Gokarn, Yatin R.</creatorcontrib><title>Diffusion and Sedimentation Interaction Parameters for Measuring the Second Virial Coefficient and Their Utility as Predictors of Protein Aggregation</title><title>Biophysical journal</title><addtitle>Biophys J</addtitle><description>The concentration-dependence of the diffusion and sedimentation coefficients (
k
D
and
k
s
, respectively) of a protein can be used to determine the second virial coefficient (
B
2), a parameter valuable in predicting protein-protein interactions. Accurate measurement of
B
2 under physiologically and pharmaceutically relevant conditions, however, requires independent measurement of
k
D
and
k
s
via orthogonal techniques. We demonstrate this by utilizing sedimentation velocity (SV) and dynamic light scattering (DLS) to analyze solutions of hen-egg white lysozyme (HEWL) and a monoclonal antibody (mAb1) in different salt solutions. The accuracy of the SV-DLS method was established by comparing measured and literature
B
2 values for HEWL. In contrast to the assumptions necessary for determining
k
D
and
k
s
via SV alone,
k
D
and
ks were of comparable magnitudes, and solution conditions were noted for both HEWL and mAb1 under which 1),
k
D
and
k
s
assumed opposite signs; and 2),
k
D
≥
k
s
. Further, we demonstrate the utility of
k
D
and
k
s
as qualitative predictors of protein aggregation through agitation and accelerated stability studies. Aggregation of mAb1 correlated well with
B
2,
k
D
, and
k
s
, thus establishing the potential for
k
D
to serve as a high-throughput predictor of protein aggregation.</description><subject>Agglomeration</subject><subject>Animals</subject><subject>Antibodies, Monoclonal - chemistry</subject><subject>Antibodies, Monoclonal - metabolism</subject><subject>Biophysics</subject><subject>Diffusion</subject><subject>Dynamic tests</subject><subject>Hot Temperature</subject><subject>Immunoglobulin G - chemistry</subject><subject>Immunoglobulin G - metabolism</subject><subject>Interaction parameters</subject><subject>Measurement</subject><subject>Motion</subject><subject>Muramidase - chemistry</subject><subject>Muramidase - metabolism</subject><subject>Protein</subject><subject>Protein Multimerization</subject><subject>Protein Stability</subject><subject>Protein Structure, Quaternary</subject><subject>Proteins</subject><subject>Proteins - chemistry</subject><subject>Proteins - metabolism</subject><subject>Sedimentation</subject><subject>Sedimentation & deposition</subject><subject>Utilities</subject><subject>Virial coefficients</subject><issn>0006-3495</issn><issn>1542-0086</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUk1v1DAQjRCILoUfwAVFXDjtMnbiJBYSUrV8VSqiEi1Xy3HGu46SeLGdSv0h_F9md0sFHOBkz_i9N-OZl2XPGawYsOp1v2p3_YoDxdCsgMODbMFEyZcATfUwWwBAtSxKKU6yJzH2AIwLYI-zEw5SSAb1Ivvxzlk7R-enXE9d_hU7N-KUdNpnzqeEQZvD_VIHPSLFMbc-5J9Rxzm4aZOnLRLNeGJ_c8HpIV97tNYZRzoH0astupBfJze4dJvrmF8GKmOSJy1vKfIJ3ZSfbTYBN4fKT7NHVg8Rn92dp9n1h_dX60_Liy8fz9dnF0sjQKZl2aFmgG0htNFIEzEFFLU1QHkpS9t1nLNWVig7rduqZLy1NTaiQaxNwYriNHt71N3N7YidoY6DHtQuuFGHW-W1U3--TG6rNv5GcSmEAE4Cr-4Egv8-Y0xqdNHgMOgJ_RxVU5Ul50UD_0XWQgrOZVUT8uVfyN7PYaI5qLpirKl5VRGIHUEm-BgD2vumGai9OVSvyBxqbw4FjSJzEOfF77-9Z_xyAwHeHAFIM79xGFTcb9HQtgKapDrv_iH_E5jpzks</recordid><startdate>20101020</startdate><enddate>20101020</enddate><creator>Saluja, Atul</creator><creator>Fesinmeyer, R. Matthew</creator><creator>Hogan, Sabine</creator><creator>Brems, David N.</creator><creator>Gokarn, Yatin R.</creator><general>Elsevier Inc</general><general>Biophysical Society</general><general>The Biophysical Society</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope><scope>7TB</scope><scope>7U5</scope><scope>L7M</scope><scope>5PM</scope></search><sort><creationdate>20101020</creationdate><title>Diffusion and Sedimentation Interaction Parameters for Measuring the Second Virial Coefficient and Their Utility as Predictors of Protein Aggregation</title><author>Saluja, Atul ; Fesinmeyer, R. Matthew ; Hogan, Sabine ; Brems, David N. ; Gokarn, Yatin R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c509t-4dea10eb35acae016c3037fc0dea994fdd221b96e9daab6412bf7e858ee7c3133</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Agglomeration</topic><topic>Animals</topic><topic>Antibodies, Monoclonal - chemistry</topic><topic>Antibodies, Monoclonal - metabolism</topic><topic>Biophysics</topic><topic>Diffusion</topic><topic>Dynamic tests</topic><topic>Hot Temperature</topic><topic>Immunoglobulin G - chemistry</topic><topic>Immunoglobulin G - metabolism</topic><topic>Interaction parameters</topic><topic>Measurement</topic><topic>Motion</topic><topic>Muramidase - chemistry</topic><topic>Muramidase - metabolism</topic><topic>Protein</topic><topic>Protein Multimerization</topic><topic>Protein Stability</topic><topic>Protein Structure, Quaternary</topic><topic>Proteins</topic><topic>Proteins - chemistry</topic><topic>Proteins - metabolism</topic><topic>Sedimentation</topic><topic>Sedimentation & deposition</topic><topic>Utilities</topic><topic>Virial coefficients</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Saluja, Atul</creatorcontrib><creatorcontrib>Fesinmeyer, R. Matthew</creatorcontrib><creatorcontrib>Hogan, Sabine</creatorcontrib><creatorcontrib>Brems, David N.</creatorcontrib><creatorcontrib>Gokarn, Yatin R.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biophysical journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Saluja, Atul</au><au>Fesinmeyer, R. Matthew</au><au>Hogan, Sabine</au><au>Brems, David N.</au><au>Gokarn, Yatin R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diffusion and Sedimentation Interaction Parameters for Measuring the Second Virial Coefficient and Their Utility as Predictors of Protein Aggregation</atitle><jtitle>Biophysical journal</jtitle><addtitle>Biophys J</addtitle><date>2010-10-20</date><risdate>2010</risdate><volume>99</volume><issue>8</issue><spage>2657</spage><epage>2665</epage><pages>2657-2665</pages><issn>0006-3495</issn><eissn>1542-0086</eissn><abstract>The concentration-dependence of the diffusion and sedimentation coefficients (
k
D
and
k
s
, respectively) of a protein can be used to determine the second virial coefficient (
B
2), a parameter valuable in predicting protein-protein interactions. Accurate measurement of
B
2 under physiologically and pharmaceutically relevant conditions, however, requires independent measurement of
k
D
and
k
s
via orthogonal techniques. We demonstrate this by utilizing sedimentation velocity (SV) and dynamic light scattering (DLS) to analyze solutions of hen-egg white lysozyme (HEWL) and a monoclonal antibody (mAb1) in different salt solutions. The accuracy of the SV-DLS method was established by comparing measured and literature
B
2 values for HEWL. In contrast to the assumptions necessary for determining
k
D
and
k
s
via SV alone,
k
D
and
ks were of comparable magnitudes, and solution conditions were noted for both HEWL and mAb1 under which 1),
k
D
and
k
s
assumed opposite signs; and 2),
k
D
≥
k
s
. Further, we demonstrate the utility of
k
D
and
k
s
as qualitative predictors of protein aggregation through agitation and accelerated stability studies. Aggregation of mAb1 correlated well with
B
2,
k
D
, and
k
s
, thus establishing the potential for
k
D
to serve as a high-throughput predictor of protein aggregation.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>20959107</pmid><doi>10.1016/j.bpj.2010.08.020</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Elsevier ScienceDirect Journals Complete; Cell Press Free Archives; EZB-FREE-00999 freely available EZB journals; PubMed Central |
subjects | Agglomeration Animals Antibodies, Monoclonal - chemistry Antibodies, Monoclonal - metabolism Biophysics Diffusion Dynamic tests Hot Temperature Immunoglobulin G - chemistry Immunoglobulin G - metabolism Interaction parameters Measurement Motion Muramidase - chemistry Muramidase - metabolism Protein Protein Multimerization Protein Stability Protein Structure, Quaternary Proteins Proteins - chemistry Proteins - metabolism Sedimentation Sedimentation & deposition Utilities Virial coefficients |
title | Diffusion and Sedimentation Interaction Parameters for Measuring the Second Virial Coefficient and Their Utility as Predictors of Protein Aggregation |
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