Kinase-active Signaling Complexes of Bacterial Chemoreceptors Do Not Contain Proposed Receptor−Receptor Contacts Observed in Crystal Structures
The receptor dimers that mediate bacterial chemotaxis form high-order signaling complexes with CheW and the kinase CheA. From the packing arrangement in two crystal structures of different receptor cytoplasmic fragments, two different models have been proposed for receptor signaling arrays: the trim...
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Veröffentlicht in: | Biochemistry (Easton) 2010-02, Vol.49 (7), p.1425-1434 |
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description | The receptor dimers that mediate bacterial chemotaxis form high-order signaling complexes with CheW and the kinase CheA. From the packing arrangement in two crystal structures of different receptor cytoplasmic fragments, two different models have been proposed for receptor signaling arrays: the trimers-of-dimers and hedgerow models. Here we identified an interdimer distance that differs substantially in the two models, labeled the atoms defining this distance through isotopic enrichment, and measured it with 19F−13C REDOR. This was done in two types of receptor samples: isolated bacterial membranes containing overexpressed, intact receptor and soluble receptor fragments reconstituted into kinase-active signaling complexes. In both cases, the distance found was not compatible with the receptor dimer−dimer contacts observed in the trimers-of-dimers or in the hedgerow models. Comparisons of simulated and observed REDOR dephasing were used to deduce a closest approach distance at this interface, which provides a constraint for the possible arrangements of receptor assemblies. |
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From the packing arrangement in two crystal structures of different receptor cytoplasmic fragments, two different models have been proposed for receptor signaling arrays: the trimers-of-dimers and hedgerow models. Here we identified an interdimer distance that differs substantially in the two models, labeled the atoms defining this distance through isotopic enrichment, and measured it with 19F−13C REDOR. This was done in two types of receptor samples: isolated bacterial membranes containing overexpressed, intact receptor and soluble receptor fragments reconstituted into kinase-active signaling complexes. In both cases, the distance found was not compatible with the receptor dimer−dimer contacts observed in the trimers-of-dimers or in the hedgerow models. Comparisons of simulated and observed REDOR dephasing were used to deduce a closest approach distance at this interface, which provides a constraint for the possible arrangements of receptor assemblies.</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi901565k</identifier><identifier>PMID: 20088541</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Bacteria ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - physiology ; Chemotaxis - genetics ; Computer Simulation ; Crystallization ; Dimerization ; Enzyme Activation ; Escherichia coli Proteins - chemistry ; Escherichia coli Proteins - genetics ; Escherichia coli Proteins - physiology ; Histidine Kinase ; Membrane Proteins - chemistry ; Membrane Proteins - genetics ; Membrane Proteins - physiology ; Methyl-Accepting Chemotaxis Proteins ; Models, Molecular ; Mutagenesis, Site-Directed ; Phenylalanine - chemistry ; Protein Kinases - chemistry ; Protein Kinases - genetics ; Protein Kinases - physiology ; Receptor Cross-Talk ; Serine - chemistry ; Signal Transduction - physiology ; Thermotoga maritima - chemistry ; Thermotoga maritima - metabolism</subject><ispartof>Biochemistry (Easton), 2010-02, Vol.49 (7), p.1425-1434</ispartof><rights>Copyright © 2010 American Chemical Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a436t-496fc49287d482a953dbe96fe3c58e9d48b5f5ba30932bf591c92173a8848ce83</citedby><cites>FETCH-LOGICAL-a436t-496fc49287d482a953dbe96fe3c58e9d48b5f5ba30932bf591c92173a8848ce83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/bi901565k$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/bi901565k$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>230,314,780,784,885,2763,27075,27923,27924,56737,56787</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20088541$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fowler, Daniel J</creatorcontrib><creatorcontrib>Weis, Robert M</creatorcontrib><creatorcontrib>Thompson, Lynmarie K</creatorcontrib><title>Kinase-active Signaling Complexes of Bacterial Chemoreceptors Do Not Contain Proposed Receptor−Receptor Contacts Observed in Crystal Structures</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>The receptor dimers that mediate bacterial chemotaxis form high-order signaling complexes with CheW and the kinase CheA. From the packing arrangement in two crystal structures of different receptor cytoplasmic fragments, two different models have been proposed for receptor signaling arrays: the trimers-of-dimers and hedgerow models. Here we identified an interdimer distance that differs substantially in the two models, labeled the atoms defining this distance through isotopic enrichment, and measured it with 19F−13C REDOR. This was done in two types of receptor samples: isolated bacterial membranes containing overexpressed, intact receptor and soluble receptor fragments reconstituted into kinase-active signaling complexes. In both cases, the distance found was not compatible with the receptor dimer−dimer contacts observed in the trimers-of-dimers or in the hedgerow models. Comparisons of simulated and observed REDOR dephasing were used to deduce a closest approach distance at this interface, which provides a constraint for the possible arrangements of receptor assemblies.</description><subject>Bacteria</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - physiology</subject><subject>Chemotaxis - genetics</subject><subject>Computer Simulation</subject><subject>Crystallization</subject><subject>Dimerization</subject><subject>Enzyme Activation</subject><subject>Escherichia coli Proteins - chemistry</subject><subject>Escherichia coli Proteins - genetics</subject><subject>Escherichia coli Proteins - physiology</subject><subject>Histidine Kinase</subject><subject>Membrane Proteins - chemistry</subject><subject>Membrane Proteins - genetics</subject><subject>Membrane Proteins - physiology</subject><subject>Methyl-Accepting Chemotaxis Proteins</subject><subject>Models, Molecular</subject><subject>Mutagenesis, Site-Directed</subject><subject>Phenylalanine - chemistry</subject><subject>Protein Kinases - chemistry</subject><subject>Protein Kinases - genetics</subject><subject>Protein Kinases - physiology</subject><subject>Receptor Cross-Talk</subject><subject>Serine - chemistry</subject><subject>Signal Transduction - physiology</subject><subject>Thermotoga maritima - chemistry</subject><subject>Thermotoga maritima - metabolism</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkcFu1DAQhi0EokvhwAsgXxDiELCdOGtfkEqAFlFRROFsOd7J1iWJg8dZ0TfgWh6RJ6nRblcgIR_Gnvnm99g_IY85e8GZ4C9brxmXtfx2hyy4FKyotJZ3yYIxVhdC1-yAPEC8zMeKLav75EAwppSs-IJcf_CjRSisS34D9NyvR9v7cU2bMEw9_ACkoaOvcxmitz1tLmAIERxMKUSkbwL9GFKGx2T9SD_FMAWEFf28I37__HW73UIuIT1rEeImU7mjiVeYsu55irNLcwR8SO51tkd4tIuH5Ou7t1-ak-L07Ph9c3Ra2KqsU35i3blKC7VcVUpYLctVCzkHpZMKdE62spOtLZkuRdtJzZ0WfFlapSrlQJWH5NVWd5rbAVYOxhRtb6boBxuvTLDe_FsZ_YVZh40Ruqzzn2aBZzuBGL7PgMkMHh30vR0hzGiWsspL1TyTz7ekiwExQre_hTPzx0GzdzCzT_4ea0_eWpaBp1vAOjSXYY7ZMPyP0A03_qdW</recordid><startdate>20100223</startdate><enddate>20100223</enddate><creator>Fowler, Daniel J</creator><creator>Weis, Robert M</creator><creator>Thompson, Lynmarie K</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>5PM</scope></search><sort><creationdate>20100223</creationdate><title>Kinase-active Signaling Complexes of Bacterial Chemoreceptors Do Not Contain Proposed Receptor−Receptor Contacts Observed in Crystal Structures</title><author>Fowler, Daniel J ; Weis, Robert M ; Thompson, Lynmarie K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a436t-496fc49287d482a953dbe96fe3c58e9d48b5f5ba30932bf591c92173a8848ce83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Bacteria</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - physiology</topic><topic>Chemotaxis - genetics</topic><topic>Computer Simulation</topic><topic>Crystallization</topic><topic>Dimerization</topic><topic>Enzyme Activation</topic><topic>Escherichia coli Proteins - chemistry</topic><topic>Escherichia coli Proteins - genetics</topic><topic>Escherichia coli Proteins - physiology</topic><topic>Histidine Kinase</topic><topic>Membrane Proteins - chemistry</topic><topic>Membrane Proteins - genetics</topic><topic>Membrane Proteins - physiology</topic><topic>Methyl-Accepting Chemotaxis Proteins</topic><topic>Models, Molecular</topic><topic>Mutagenesis, Site-Directed</topic><topic>Phenylalanine - chemistry</topic><topic>Protein Kinases - chemistry</topic><topic>Protein Kinases - genetics</topic><topic>Protein Kinases - physiology</topic><topic>Receptor Cross-Talk</topic><topic>Serine - chemistry</topic><topic>Signal Transduction - physiology</topic><topic>Thermotoga maritima - chemistry</topic><topic>Thermotoga maritima - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fowler, Daniel J</creatorcontrib><creatorcontrib>Weis, Robert M</creatorcontrib><creatorcontrib>Thompson, Lynmarie K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fowler, Daniel J</au><au>Weis, Robert M</au><au>Thompson, Lynmarie K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Kinase-active Signaling Complexes of Bacterial Chemoreceptors Do Not Contain Proposed Receptor−Receptor Contacts Observed in Crystal Structures</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>2010-02-23</date><risdate>2010</risdate><volume>49</volume><issue>7</issue><spage>1425</spage><epage>1434</epage><pages>1425-1434</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>The receptor dimers that mediate bacterial chemotaxis form high-order signaling complexes with CheW and the kinase CheA. From the packing arrangement in two crystal structures of different receptor cytoplasmic fragments, two different models have been proposed for receptor signaling arrays: the trimers-of-dimers and hedgerow models. Here we identified an interdimer distance that differs substantially in the two models, labeled the atoms defining this distance through isotopic enrichment, and measured it with 19F−13C REDOR. This was done in two types of receptor samples: isolated bacterial membranes containing overexpressed, intact receptor and soluble receptor fragments reconstituted into kinase-active signaling complexes. In both cases, the distance found was not compatible with the receptor dimer−dimer contacts observed in the trimers-of-dimers or in the hedgerow models. Comparisons of simulated and observed REDOR dephasing were used to deduce a closest approach distance at this interface, which provides a constraint for the possible arrangements of receptor assemblies.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>20088541</pmid><doi>10.1021/bi901565k</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacteria Bacterial Proteins - chemistry Bacterial Proteins - genetics Bacterial Proteins - physiology Chemotaxis - genetics Computer Simulation Crystallization Dimerization Enzyme Activation Escherichia coli Proteins - chemistry Escherichia coli Proteins - genetics Escherichia coli Proteins - physiology Histidine Kinase Membrane Proteins - chemistry Membrane Proteins - genetics Membrane Proteins - physiology Methyl-Accepting Chemotaxis Proteins Models, Molecular Mutagenesis, Site-Directed Phenylalanine - chemistry Protein Kinases - chemistry Protein Kinases - genetics Protein Kinases - physiology Receptor Cross-Talk Serine - chemistry Signal Transduction - physiology Thermotoga maritima - chemistry Thermotoga maritima - metabolism |
title | Kinase-active Signaling Complexes of Bacterial Chemoreceptors Do Not Contain Proposed Receptor−Receptor Contacts Observed in Crystal Structures |
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